EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000005236 (Gene tree)
Gene ID: 100604364
Gene Symbol: -
Alias: -
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 14391 bases
Position: chr4:85205997-85220387
Accession: 100604364
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000028058	KH_1	PF00013.29	1.9e-07	1	1
ENSNLEP00000039246	KH_1	PF00013.29	3.7e-07	1	1
ENSNLEP00000034492	KH_1	PF00013.29	3.8e-07	1	1
ENSNLEP00000044578	KH_1	PF00013.29	3.9e-07	1	1
ENSNLEP00000006411	KH_1	PF00013.29	4e-07	1	1
ENSNLEP00000028058	zf-CCHC	PF00098.23	0.00017	1	1
ENSNLEP00000039246	zf-CCHC	PF00098.23	0.00025	1	1
ENSNLEP00000044578	zf-CCHC	PF00098.23	0.00026	1	1
ENSNLEP00000034492	zf-CCHC	PF00098.23	0.00026	1	1
ENSNLEP00000006411	zf-CCHC	PF00098.23	0.00026	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000048223	-	1887	-	ENSNLEP00000039246	628 (aa)	-	A0A2I3H6W2
ENSNLET00000045800	-	1254	-	ENSNLEP00000028058	417 (aa)	-	A0A2I3G9U1
ENSNLET00000057092	-	3582	XM_012497820	ENSNLEP00000034492	639 (aa)	XP_012353274	A0A2I3GTB5
ENSNLET00000006737	-	1962	-	ENSNLEP00000006411	653 (aa)	-	G1QZP0
ENSNLET00000047043	-	3150	XM_003274165	ENSNLEP00000044578	638 (aa)	XP_003274213	A0A2I3HLQ1
ENSNLET00000050737	-	333	-	ENSNLEP00000030164	110 (aa)	-	A0A2I3GFV7

Gene Model

Click here to download ENSNLEG00000005236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000005236's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000005236	-	91	80.928	ENSAPOG00000012341	sf1	56	80.307	Acanthochromis_polyacanthus
ENSNLEG00000005236	-	99	94.264	ENSAMEG00000017828	SF1	100	93.712	Ailuropoda_melanoleuca
ENSNLEG00000005236	-	89	82.713	ENSACIG00000016514	sf1	62	78.043	Amphilophus_citrinellus
ENSNLEG00000005236	-	91	80.412	ENSAOCG00000010934	sf1	61	75.878	Amphiprion_ocellaris
ENSNLEG00000005236	-	91	80.412	ENSAPEG00000009498	sf1	61	75.878	Amphiprion_percula
ENSNLEG00000005236	-	89	81.579	ENSATEG00000001894	sf1	60	77.488	Anabas_testudineus
ENSNLEG00000005236	-	97	86.207	ENSANAG00000022607	-	99	87.396	Aotus_nancymaae
ENSNLEG00000005236	-	100	99.687	ENSANAG00000026664	-	100	99.687	Aotus_nancymaae
ENSNLEG00000005236	-	88	84.282	ENSACLG00000007633	sf1	61	79.805	Astatotilapia_calliptera
ENSNLEG00000005236	-	88	85.829	ENSAMXG00000003630	sf1	50	79.218	Astyanax_mexicanus
ENSNLEG00000005236	-	100	99.844	ENSBTAG00000001035	SF1	100	99.844	Bos_taurus
ENSNLEG00000005236	-	100	99.844	ENSCJAG00000002780	SF1	100	99.844	Callithrix_jacchus
ENSNLEG00000005236	-	100	99.843	ENSCAFG00000014239	SF1	100	99.843	Canis_familiaris
ENSNLEG00000005236	-	100	99.844	ENSCAFG00020014381	SF1	100	99.844	Canis_lupus_dingo
ENSNLEG00000005236	-	100	99.844	ENSCHIG00000025867	SF1	100	99.844	Capra_hircus
ENSNLEG00000005236	-	82	98.925	ENSTSYG00000033618	SF1	98	98.925	Carlito_syrichta
ENSNLEG00000005236	-	88	99.457	ENSCAPG00000010762	SF1	87	97.273	Cavia_aperea
ENSNLEG00000005236	-	98	99.362	ENSCPOG00000012290	SF1	100	99.362	Cavia_porcellus
ENSNLEG00000005236	-	99	85.851	ENSCCAG00000023781	-	94	84.982	Cebus_capucinus
ENSNLEG00000005236	-	100	99.843	ENSCCAG00000037881	SF1	100	99.843	Cebus_capucinus
ENSNLEG00000005236	-	100	99.844	ENSCATG00000011564	SF1	100	99.844	Cercocebus_atys
ENSNLEG00000005236	-	91	100.000	ENSCSAG00000007258	SF1	96	100.000	Chlorocebus_sabaeus
ENSNLEG00000005236	-	84	92.571	ENSCHOG00000006008	SF1	79	93.780	Choloepus_hoffmanni
ENSNLEG00000005236	-	88	92.683	ENSCPBG00000023763	SF1	66	84.971	Chrysemys_picta_bellii
ENSNLEG00000005236	-	74	67.093	ENSCING00000005564	-	74	60.638	Ciona_intestinalis
ENSNLEG00000005236	-	86	59.137	ENSCSAVG00000009055	-	72	63.787	Ciona_savignyi
ENSNLEG00000005236	-	100	100.000	ENSCANG00000042201	SF1	100	100.000	Colobus_angolensis_palliatus
ENSNLEG00000005236	-	100	99.374	ENSCGRG00001003677	Sf1	100	99.374	Cricetulus_griseus_chok1gshd
ENSNLEG00000005236	-	88	99.185	ENSCGRG00000001708	Sf1	97	97.905	Cricetulus_griseus_crigri
ENSNLEG00000005236	-	89	80.628	ENSCSEG00000014375	sf1	53	80.105	Cynoglossus_semilaevis
ENSNLEG00000005236	-	89	84.324	ENSCVAG00000001670	sf1	63	78.973	Cyprinodon_variegatus
ENSNLEG00000005236	-	92	82.474	ENSDARG00000008188	sf1	72	78.788	Danio_rerio
ENSNLEG00000005236	-	91	99.208	ENSDNOG00000001282	SF1	96	99.431	Dasypus_novemcinctus
ENSNLEG00000005236	-	100	99.844	ENSDORG00000016334	Sf1	100	99.844	Dipodomys_ordii
ENSNLEG00000005236	-	92	92.308	ENSETEG00000012830	SF1	82	91.282	Echinops_telfairi
ENSNLEG00000005236	-	91	99.472	ENSEASG00005018272	SF1	96	99.620	Equus_asinus_asinus
ENSNLEG00000005236	-	91	99.736	ENSECAG00000024544	SF1	96	99.810	Equus_caballus
ENSNLEG00000005236	-	78	99.077	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSNLEG00000005236	-	88	81.432	ENSELUG00000013225	sf1	54	78.469	Esox_lucius
ENSNLEG00000005236	-	100	99.843	ENSFCAG00000012231	SF1	100	99.843	Felis_catus
ENSNLEG00000005236	-	98	93.925	ENSFDAG00000009833	SF1	99	93.925	Fukomys_damarensis
ENSNLEG00000005236	-	91	80.155	ENSFHEG00000022656	sf1	61	76.102	Fundulus_heteroclitus
ENSNLEG00000005236	-	79	87.941	ENSGMOG00000007469	sf1	62	87.941	Gadus_morhua
ENSNLEG00000005236	-	91	83.896	ENSGAFG00000019284	sf1	78	80.238	Gambusia_affinis
ENSNLEG00000005236	-	92	80.000	ENSGACG00000000826	sf1	66	79.494	Gasterosteus_aculeatus
ENSNLEG00000005236	-	88	92.683	ENSGAGG00000021691	SF1	72	85.742	Gopherus_agassizii
ENSNLEG00000005236	-	89	82.895	ENSHBUG00000011598	sf1	61	77.494	Haplochromis_burtoni
ENSNLEG00000005236	-	100	99.687	ENSHGLG00000009541	SF1	100	99.687	Heterocephalus_glaber_female
ENSNLEG00000005236	-	88	100.000	ENSHGLG00100013879	-	99	88.226	Heterocephalus_glaber_male
ENSNLEG00000005236	-	73	93.399	ENSHGLG00100008076	-	87	87.037	Heterocephalus_glaber_male
ENSNLEG00000005236	-	92	89.005	ENSHGLG00100008255	-	94	86.555	Heterocephalus_glaber_male
ENSNLEG00000005236	-	91	79.639	ENSHCOG00000011388	sf1	58	77.193	Hippocampus_comes
ENSNLEG00000005236	-	88	89.431	ENSSTOG00000024353	-	83	96.667	Ictidomys_tridecemlineatus
ENSNLEG00000005236	-	98	99.841	ENSSTOG00000009790	-	100	99.841	Ictidomys_tridecemlineatus
ENSNLEG00000005236	-	100	99.687	ENSJJAG00000011788	Sf1	100	99.687	Jaculus_jaculus
ENSNLEG00000005236	-	91	81.841	ENSKMAG00000005854	sf1	63	77.283	Kryptolebias_marmoratus
ENSNLEG00000005236	-	89	82.199	ENSLBEG00000019836	sf1	64	77.327	Labrus_bergylta
ENSNLEG00000005236	-	90	81.053	ENSLACG00000018493	SF1	84	69.392	Latimeria_chalumnae
ENSNLEG00000005236	-	88	85.294	ENSLOCG00000002130	sf1	57	84.946	Lepisosteus_oculatus
ENSNLEG00000005236	-	99	96.899	ENSLAFG00000007201	SF1	100	96.899	Loxodonta_africana
ENSNLEG00000005236	-	100	99.844	ENSMFAG00000033122	SF1	100	99.844	Macaca_fascicularis
ENSNLEG00000005236	-	100	99.843	ENSMMUG00000022606	SF1	100	99.843	Macaca_mulatta
ENSNLEG00000005236	-	100	99.844	ENSMNEG00000037901	SF1	100	99.844	Macaca_nemestrina
ENSNLEG00000005236	-	100	98.086	ENSMLEG00000040706	SF1	100	98.086	Mandrillus_leucophaeus
ENSNLEG00000005236	-	91	80.928	ENSMAMG00000001780	sf1	58	78.125	Mastacembelus_armatus
ENSNLEG00000005236	-	89	82.632	ENSMZEG00005009196	sf1	61	77.262	Maylandia_zebra
ENSNLEG00000005236	-	100	99.060	ENSMAUG00000014064	Sf1	100	99.060	Mesocricetus_auratus
ENSNLEG00000005236	-	100	99.687	ENSMICG00000001202	SF1	100	99.687	Microcebus_murinus
ENSNLEG00000005236	-	100	99.060	ENSMOCG00000022038	Sf1	100	99.060	Microtus_ochrogaster
ENSNLEG00000005236	-	88	81.720	ENSMMOG00000020474	sf1	60	76.812	Mola_mola
ENSNLEG00000005236	-	89	98.391	ENSMODG00000029407	SF1	97	94.407	Monodelphis_domestica
ENSNLEG00000005236	-	89	82.888	ENSMALG00000020521	sf1	68	78.365	Monopterus_albus
ENSNLEG00000005236	-	100	99.218	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSNLEG00000005236	-	100	99.218	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSNLEG00000005236	-	100	99.218	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSNLEG00000005236	-	100	99.218	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSNLEG00000005236	-	100	98.592	ENSMPUG00000012684	SF1	100	98.592	Mustela_putorius_furo
ENSNLEG00000005236	-	92	95.288	ENSMLUG00000029800	-	78	94.934	Myotis_lucifugus
ENSNLEG00000005236	-	99	99.525	ENSMLUG00000015217	-	99	99.525	Myotis_lucifugus
ENSNLEG00000005236	-	100	99.530	ENSNGAG00000005550	Sf1	100	99.530	Nannospalax_galili
ENSNLEG00000005236	-	88	84.282	ENSNBRG00000017606	sf1	60	79.805	Neolamprologus_brichardi
ENSNLEG00000005236	-	88	98.630	ENSMEUG00000013424	SF1	97	98.246	Notamacropus_eugenii
ENSNLEG00000005236	-	78	99.692	ENSOPRG00000005008	SF1	96	99.577	Ochotona_princeps
ENSNLEG00000005236	-	100	92.190	ENSODEG00000006102	-	100	92.190	Octodon_degus
ENSNLEG00000005236	-	89	82.895	ENSONIG00000015728	sf1	61	77.494	Oreochromis_niloticus
ENSNLEG00000005236	-	72	88.119	ENSOANG00000002909	SF1	96	87.724	Ornithorhynchus_anatinus
ENSNLEG00000005236	-	99	99.683	ENSOCUG00000026486	SF1	100	99.683	Oryctolagus_cuniculus
ENSNLEG00000005236	-	89	81.102	ENSORLG00000011853	sf1	58	76.978	Oryzias_latipes
ENSNLEG00000005236	-	91	79.744	ENSORLG00020011834	sf1	60	75.822	Oryzias_latipes_hni
ENSNLEG00000005236	-	89	80.577	ENSORLG00015012855	sf1	59	76.739	Oryzias_latipes_hsok
ENSNLEG00000005236	-	91	80.256	ENSOMEG00000005210	sf1	60	77.698	Oryzias_melastigma
ENSNLEG00000005236	-	100	99.687	ENSOGAG00000016196	SF1	100	99.687	Otolemur_garnettii
ENSNLEG00000005236	-	91	100.000	ENSOARG00000009166	SF1	97	94.955	Ovis_aries
ENSNLEG00000005236	-	99	99.513	ENSPPAG00000002799	-	100	99.837	Pan_paniscus
ENSNLEG00000005236	-	98	99.841	ENSPPRG00000013566	SF1	100	99.837	Panthera_pardus
ENSNLEG00000005236	-	90	99.200	ENSPTIG00000016141	SF1	92	98.438	Panthera_tigris_altaica
ENSNLEG00000005236	-	100	100.000	ENSPTRG00000003846	SF1	100	100.000	Pan_troglodytes
ENSNLEG00000005236	-	100	99.761	ENSPANG00000020754	SF1	100	99.761	Papio_anubis
ENSNLEG00000005236	-	74	80.831	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSNLEG00000005236	-	63	90.566	ENSPSIG00000003610	SF1	81	82.609	Pelodiscus_sinensis
ENSNLEG00000005236	-	100	99.216	ENSPEMG00000010463	Sf1	100	99.216	Peromyscus_maniculatus_bairdii
ENSNLEG00000005236	-	81	72.107	ENSPMAG00000008272	sf1	53	66.488	Petromyzon_marinus
ENSNLEG00000005236	-	100	98.748	ENSPCIG00000018173	SF1	100	98.748	Phascolarctos_cinereus
ENSNLEG00000005236	-	91	85.752	ENSPFOG00000013683	sf1	68	81.146	Poecilia_formosa
ENSNLEG00000005236	-	88	83.862	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSNLEG00000005236	-	88	83.862	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSNLEG00000005236	-	90	82.292	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSNLEG00000005236	-	100	99.687	ENSPPYG00000003098	-	100	99.687	Pongo_abelii
ENSNLEG00000005236	-	88	99.187	ENSPCAG00000013631	SF1	78	97.909	Procavia_capensis
ENSNLEG00000005236	-	100	99.687	ENSPCOG00000027546	SF1	100	99.687	Propithecus_coquereli
ENSNLEG00000005236	-	88	99.187	ENSPVAG00000016938	SF1	79	97.909	Pteropus_vampyrus
ENSNLEG00000005236	-	89	82.632	ENSPNYG00000004673	sf1	59	78.436	Pundamilia_nyererei
ENSNLEG00000005236	-	89	85.185	ENSPNAG00000013072	sf1	59	79.805	Pygocentrus_nattereri
ENSNLEG00000005236	-	100	99.218	ENSRNOG00000021085	Sf1	100	99.218	Rattus_norvegicus
ENSNLEG00000005236	-	100	95.775	ENSRBIG00000042818	SF1	100	95.775	Rhinopithecus_bieti
ENSNLEG00000005236	-	100	98.321	ENSRROG00000045655	SF1	100	98.321	Rhinopithecus_roxellana
ENSNLEG00000005236	-	70	43.182	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSNLEG00000005236	-	99	81.010	ENSSBOG00000022267	-	99	81.731	Saimiri_boliviensis_boliviensis
ENSNLEG00000005236	-	91	91.906	ENSSHAG00000006841	SF1	75	93.171	Sarcophilus_harrisii
ENSNLEG00000005236	-	88	82.888	ENSSFOG00015021978	sf1	58	77.184	Scleropages_formosus
ENSNLEG00000005236	-	89	79.896	ENSSMAG00000007549	sf1	63	76.526	Scophthalmus_maximus
ENSNLEG00000005236	-	91	80.206	ENSSDUG00000003903	sf1	63	76.402	Seriola_dumerili
ENSNLEG00000005236	-	91	80.206	ENSSLDG00000013075	sf1	61	76.402	Seriola_lalandi_dorsalis
ENSNLEG00000005236	-	88	94.565	ENSSARG00000008180	SF1	100	95.745	Sorex_araneus
ENSNLEG00000005236	-	85	92.416	ENSSPUG00000012907	SF1	86	81.071	Sphenodon_punctatus
ENSNLEG00000005236	-	91	80.670	ENSSPAG00000019060	sf1	61	76.047	Stegastes_partitus
ENSNLEG00000005236	-	100	99.687	ENSSSCG00000013021	SF1	100	99.687	Sus_scrofa
ENSNLEG00000005236	-	92	72.265	ENSTNIG00000004820	sf1	80	70.023	Tetraodon_nigroviridis
ENSNLEG00000005236	-	87	100.000	ENSTBEG00000013133	SF1	79	100.000	Tupaia_belangeri
ENSNLEG00000005236	-	88	93.750	ENSTTRG00000008857	SF1	96	95.543	Tursiops_truncatus
ENSNLEG00000005236	-	82	96.947	ENSUAMG00000011977	SF1	100	96.947	Ursus_americanus
ENSNLEG00000005236	-	91	98.677	ENSUMAG00000007268	SF1	95	97.500	Ursus_maritimus
ENSNLEG00000005236	-	65	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSNLEG00000005236	-	91	100.000	ENSVVUG00000028585	SF1	96	100.000	Vulpes_vulpes
ENSNLEG00000005236	-	94	82.872	ENSXETG00000008434	sf1	66	84.021	Xenopus_tropicalis
ENSNLEG00000005236	-	88	84.932	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSNLEG00000005236	-	89	83.113	ENSXMAG00000007822	sf1	61	79.426	Xiphophorus_maculatus