EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000005337 (Gene tree)
Gene ID: 100594941
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 10065 bases
Position: chr21:52303235-52313299
Accession: 100594941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000006477	MBD	PF01429.19	4.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000006805	MBD4-201	2820	XM_003265031	ENSNLEP00000006477	578 (aa)	XP_003265079	G1QZV6

Gene Model

Click here to download ENSNLEG00000005337's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000005337's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000005337	MBD4	100	97.241	ENSG00000129071	MBD4	100	97.241	Homo_sapiens
ENSNLEG00000005337	MBD4	99	77.296	ENSAMEG00000004562	MBD4	99	77.296	Ailuropoda_melanoleuca
ENSNLEG00000005337	MBD4	85	41.584	ENSAOCG00000001157	mbd4	95	42.012	Amphiprion_ocellaris
ENSNLEG00000005337	MBD4	85	42.178	ENSAPEG00000016131	mbd4	95	42.604	Amphiprion_percula
ENSNLEG00000005337	MBD4	99	71.379	ENSBTAG00000021645	MBD4	100	71.379	Bos_taurus
ENSNLEG00000005337	MBD4	100	87.889	ENSCJAG00000017293	MBD4	100	87.889	Callithrix_jacchus
ENSNLEG00000005337	MBD4	99	76.829	ENSCAFG00000004867	MBD4	99	76.829	Canis_familiaris
ENSNLEG00000005337	MBD4	99	76.829	ENSCAFG00020007082	MBD4	99	76.829	Canis_lupus_dingo
ENSNLEG00000005337	MBD4	99	69.983	ENSCHIG00000009760	MBD4	100	69.983	Capra_hircus
ENSNLEG00000005337	MBD4	100	88.601	ENSCCAG00000029796	MBD4	100	88.601	Cebus_capucinus
ENSNLEG00000005337	MBD4	100	92.573	ENSCATG00000035211	MBD4	100	92.573	Cercocebus_atys
ENSNLEG00000005337	MBD4	98	70.826	ENSCLAG00000008974	MBD4	99	70.826	Chinchilla_lanigera
ENSNLEG00000005337	MBD4	100	91.883	ENSCSAG00000009037	MBD4	100	91.883	Chlorocebus_sabaeus
ENSNLEG00000005337	MBD4	87	50.289	ENSCPBG00000014704	MBD4	89	50.096	Chrysemys_picta_bellii
ENSNLEG00000005337	MBD4	100	92.573	ENSCANG00000007120	MBD4	100	92.573	Colobus_angolensis_palliatus
ENSNLEG00000005337	MBD4	99	66.667	ENSCGRG00001003507	Mbd4	100	66.667	Cricetulus_griseus_chok1gshd
ENSNLEG00000005337	MBD4	99	66.667	ENSCGRG00000010974	Mbd4	100	66.667	Cricetulus_griseus_crigri
ENSNLEG00000005337	MBD4	99	76.265	ENSDNOG00000049619	MBD4	100	76.265	Dasypus_novemcinctus
ENSNLEG00000005337	MBD4	81	64.026	ENSDORG00000000902	-	97	63.445	Dipodomys_ordii
ENSNLEG00000005337	MBD4	99	80.454	ENSEASG00005014800	MBD4	100	80.454	Equus_asinus_asinus
ENSNLEG00000005337	MBD4	99	80.628	ENSECAG00000022106	MBD4	100	80.628	Equus_caballus
ENSNLEG00000005337	MBD4	96	61.302	ENSEEUG00000011459	MBD4	99	61.302	Erinaceus_europaeus
ENSNLEG00000005337	MBD4	99	79.549	ENSFCAG00000000083	MBD4	99	79.549	Felis_catus
ENSNLEG00000005337	MBD4	82	45.142	ENSFALG00000013663	MBD4	99	45.187	Ficedula_albicollis
ENSNLEG00000005337	MBD4	87	51.248	ENSGAGG00000018644	MBD4	89	50.962	Gopherus_agassizii
ENSNLEG00000005337	MBD4	100	96.207	ENSGGOG00000010698	MBD4	100	96.207	Gorilla_gorilla
ENSNLEG00000005337	MBD4	98	73.111	ENSHGLG00000009034	MBD4	99	73.111	Heterocephalus_glaber_female
ENSNLEG00000005337	MBD4	98	73.111	ENSHGLG00100000135	MBD4	99	73.111	Heterocephalus_glaber_male
ENSNLEG00000005337	MBD4	99	73.171	ENSSTOG00000020663	MBD4	100	73.171	Ictidomys_tridecemlineatus
ENSNLEG00000005337	MBD4	85	39.006	ENSLBEG00000005669	MBD4	80	50.725	Labrus_bergylta
ENSNLEG00000005337	MBD4	99	75.694	ENSLAFG00000010609	MBD4	99	75.694	Loxodonta_africana
ENSNLEG00000005337	MBD4	100	91.883	ENSMFAG00000002266	MBD4	100	91.883	Macaca_fascicularis
ENSNLEG00000005337	MBD4	100	91.910	ENSMMUG00000012723	MBD4	100	91.910	Macaca_mulatta
ENSNLEG00000005337	MBD4	96	91.741	ENSMNEG00000029752	MBD4	99	91.741	Macaca_nemestrina
ENSNLEG00000005337	MBD4	100	92.401	ENSMLEG00000024859	MBD4	100	92.401	Mandrillus_leucophaeus
ENSNLEG00000005337	MBD4	100	81.834	ENSMICG00000008022	MBD4	100	81.834	Microcebus_murinus
ENSNLEG00000005337	MBD4	68	47.970	ENSMOCG00000002466	-	97	47.462	Microtus_ochrogaster
ENSNLEG00000005337	MBD4	86	59.800	ENSMODG00000006399	-	99	59.200	Monodelphis_domestica
ENSNLEG00000005337	MBD4	99	66.725	MGP_CAROLIEiJ_G0028760	Mbd4	100	66.725	Mus_caroli
ENSNLEG00000005337	MBD4	99	66.376	ENSMUSG00000030322	Mbd4	100	66.376	Mus_musculus
ENSNLEG00000005337	MBD4	99	67.304	MGP_PahariEiJ_G0022511	-	100	67.304	Mus_pahari
ENSNLEG00000005337	MBD4	99	65.854	MGP_SPRETEiJ_G0029788	Mbd4	100	65.854	Mus_spretus
ENSNLEG00000005337	MBD4	99	75.567	ENSMPUG00000017195	MBD4	99	75.567	Mustela_putorius_furo
ENSNLEG00000005337	MBD4	93	80.374	ENSMLUG00000014766	MBD4	98	80.374	Myotis_lucifugus
ENSNLEG00000005337	MBD4	50	100.000	ENSMEUG00000015599	-	77	100.000	Notamacropus_eugenii
ENSNLEG00000005337	MBD4	99	66.090	ENSOPRG00000000473	MBD4	99	66.090	Ochotona_princeps
ENSNLEG00000005337	MBD4	85	41.011	ENSONIG00000017212	mbd4	62	69.903	Oreochromis_niloticus
ENSNLEG00000005337	MBD4	74	44.138	ENSOANG00000004589	-	96	44.138	Ornithorhynchus_anatinus
ENSNLEG00000005337	MBD4	99	69.019	ENSOCUG00000013006	MBD4	100	69.019	Oryctolagus_cuniculus
ENSNLEG00000005337	MBD4	99	77.352	ENSOGAG00000010236	MBD4	100	77.352	Otolemur_garnettii
ENSNLEG00000005337	MBD4	99	70.157	ENSOARG00000014699	MBD4	100	70.157	Ovis_aries
ENSNLEG00000005337	MBD4	100	95.862	ENSPPAG00000036528	MBD4	100	95.862	Pan_paniscus
ENSNLEG00000005337	MBD4	99	77.990	ENSPPRG00000016480	MBD4	99	77.990	Panthera_pardus
ENSNLEG00000005337	MBD4	100	96.724	ENSPTRG00000015377	MBD4	100	96.724	Pan_troglodytes
ENSNLEG00000005337	MBD4	100	93.092	ENSPANG00000015047	MBD4	100	93.092	Papio_anubis
ENSNLEG00000005337	MBD4	88	49.343	ENSPSIG00000007892	MBD4	90	49.156	Pelodiscus_sinensis
ENSNLEG00000005337	MBD4	90	60.803	ENSPEMG00000006226	Mbd4	97	60.803	Peromyscus_maniculatus_bairdii
ENSNLEG00000005337	MBD4	92	57.699	ENSPCIG00000002276	-	100	57.328	Phascolarctos_cinereus
ENSNLEG00000005337	MBD4	100	95.682	ENSPPYG00000013417	MBD4	100	95.682	Pongo_abelii
ENSNLEG00000005337	MBD4	95	71.377	ENSPCAG00000012915	MBD4	99	71.377	Procavia_capensis
ENSNLEG00000005337	MBD4	99	79.376	ENSPVAG00000005238	MBD4	99	79.376	Pteropus_vampyrus
ENSNLEG00000005337	MBD4	99	66.146	ENSRNOG00000010919	Mbd4	100	66.146	Rattus_norvegicus
ENSNLEG00000005337	MBD4	100	93.264	ENSRBIG00000027722	MBD4	100	93.264	Rhinopithecus_bieti
ENSNLEG00000005337	MBD4	100	93.092	ENSRROG00000029136	MBD4	100	93.092	Rhinopithecus_roxellana
ENSNLEG00000005337	MBD4	99	89.410	ENSSBOG00000016810	MBD4	100	88.889	Saimiri_boliviensis_boliviensis
ENSNLEG00000005337	MBD4	93	56.296	ENSSHAG00000012953	MBD4	94	56.481	Sarcophilus_harrisii
ENSNLEG00000005337	MBD4	85	41.717	ENSSFOG00015016292	mbd4	95	42.054	Scleropages_formosus
ENSNLEG00000005337	MBD4	81	62.017	ENSSARG00000004496	-	80	62.017	Sorex_araneus
ENSNLEG00000005337	MBD4	86	49.903	ENSSPUG00000017344	MBD4	91	49.710	Sphenodon_punctatus
ENSNLEG00000005337	MBD4	99	75.610	ENSSSCG00000033303	MBD4	100	75.610	Sus_scrofa
ENSNLEG00000005337	MBD4	85	37.992	ENSTNIG00000017927	mbd4	55	67.416	Tetraodon_nigroviridis
ENSNLEG00000005337	MBD4	88	60.550	ENSTBEG00000003041	-	88	60.550	Tupaia_belangeri
ENSNLEG00000005337	MBD4	97	77.128	ENSTTRG00000011265	MBD4	100	77.128	Tursiops_truncatus
ENSNLEG00000005337	MBD4	86	80.561	ENSUAMG00000000814	MBD4	99	80.561	Ursus_americanus
ENSNLEG00000005337	MBD4	99	78.360	ENSUMAG00000017542	MBD4	100	78.360	Ursus_maritimus
ENSNLEG00000005337	MBD4	65	74.312	ENSVPAG00000004040	-	68	74.312	Vicugna_pacos
ENSNLEG00000005337	MBD4	99	76.655	ENSVVUG00000014222	MBD4	99	76.655	Vulpes_vulpes