EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000005383 (Gene tree)
Gene ID: 100601677
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 42302 bases
Position: chr7b:67411105-67453406
Accession: 100601677
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000040932	ResIII	PF04851.15	9.2e-11	1	1
ENSNLEP00000006559	ResIII	PF04851.15	1.2e-10	1	1
ENSNLEP00000006559	DEAD	PF00270.29	5.4e-06	1	1
ENSNLEP00000040932	DEAD	PF00270.29	5.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000006891	SMARCA5-202	3108	-	ENSNLEP00000006559	1035 (aa)	-	G1R038
ENSNLET00000053146	SMARCA5-203	1032	-	ENSNLEP00000025768	343 (aa)	-	A0A2I3FZV2
ENSNLET00000042487	SMARCA5-201	5202	XM_003257759	ENSNLEP00000040932	1052 (aa)	XP_003257807	A0A2I3HBQ1

Gene Model

Click here to download ENSNLEG00000005383's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000005383's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000005383	SMARCA5	94	83.417	ENSNLEG00000015179	SMARCA1	95	85.489
ENSNLEG00000005383	SMARCA5	55	43.455	ENSNLEG00000000179	CHD1L	62	43.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000005383	SMARCA5	100	99.810	ENSG00000153147	SMARCA5	100	99.810	Homo_sapiens
ENSNLEG00000005383	SMARCA5	100	98.859	ENSAMEG00000009585	SMARCA5	100	98.859	Ailuropoda_melanoleuca
ENSNLEG00000005383	SMARCA5	91	96.612	ENSAPLG00000009206	SMARCA5	100	96.612	Anas_platyrhynchos
ENSNLEG00000005383	SMARCA5	98	93.816	ENSACAG00000003038	SMARCA5	99	93.816	Anolis_carolinensis
ENSNLEG00000005383	SMARCA5	100	99.430	ENSANAG00000019345	SMARCA5	100	99.430	Aotus_nancymaae
ENSNLEG00000005383	SMARCA5	100	98.289	ENSBTAG00000003399	SMARCA5	100	98.289	Bos_taurus
ENSNLEG00000005383	SMARCA5	100	99.620	ENSCJAG00000002735	SMARCA5	100	99.620	Callithrix_jacchus
ENSNLEG00000005383	SMARCA5	100	98.669	ENSCAFG00000007525	SMARCA5	100	98.669	Canis_familiaris
ENSNLEG00000005383	SMARCA5	98	98.643	ENSCAFG00020025641	SMARCA5	99	98.643	Canis_lupus_dingo
ENSNLEG00000005383	SMARCA5	100	97.053	ENSCHIG00000016375	-	100	97.053	Capra_hircus
ENSNLEG00000005383	SMARCA5	100	98.764	ENSCHIG00000013730	-	100	98.764	Capra_hircus
ENSNLEG00000005383	SMARCA5	97	97.363	ENSTSYG00000009954	SMARCA5	99	99.597	Carlito_syrichta
ENSNLEG00000005383	SMARCA5	92	98.967	ENSCAPG00000013747	SMARCA5	95	98.967	Cavia_aperea
ENSNLEG00000005383	SMARCA5	100	98.004	ENSCPOG00000002259	SMARCA5	100	98.004	Cavia_porcellus
ENSNLEG00000005383	SMARCA5	100	99.620	ENSCCAG00000027215	SMARCA5	100	99.620	Cebus_capucinus
ENSNLEG00000005383	SMARCA5	100	100.000	ENSCATG00000044917	SMARCA5	100	100.000	Cercocebus_atys
ENSNLEG00000005383	SMARCA5	99	95.211	ENSCLAG00000006153	SMARCA5	100	99.295	Chinchilla_lanigera
ENSNLEG00000005383	SMARCA5	92	100.000	ENSCSAG00000003448	SMARCA5	100	100.000	Chlorocebus_sabaeus
ENSNLEG00000005383	SMARCA5	92	98.292	ENSCHOG00000011724	SMARCA5	90	98.292	Choloepus_hoffmanni
ENSNLEG00000005383	SMARCA5	95	98.094	ENSCPBG00000027535	SMARCA5	96	98.094	Chrysemys_picta_bellii
ENSNLEG00000005383	SMARCA5	100	99.810	ENSCANG00000041629	SMARCA5	100	99.810	Colobus_angolensis_palliatus
ENSNLEG00000005383	SMARCA5	99	97.909	ENSCGRG00001012719	Smarca5	99	97.909	Cricetulus_griseus_chok1gshd
ENSNLEG00000005383	SMARCA5	95	99.097	ENSCGRG00000001417	Smarca5	99	99.396	Cricetulus_griseus_crigri
ENSNLEG00000005383	SMARCA5	98	95.455	ENSDNOG00000009158	SMARCA5	98	95.455	Dasypus_novemcinctus
ENSNLEG00000005383	SMARCA5	90	90.612	ENSDORG00000003466	Smarca5	97	90.612	Dipodomys_ordii
ENSNLEG00000005383	SMARCA5	92	85.744	ENSEBUG00000014773	SMARCA5	96	85.744	Eptatretus_burgeri
ENSNLEG00000005383	SMARCA5	100	99.049	ENSEASG00005001866	SMARCA5	100	99.049	Equus_asinus_asinus
ENSNLEG00000005383	SMARCA5	100	99.049	ENSECAG00000002676	SMARCA5	100	99.049	Equus_caballus
ENSNLEG00000005383	SMARCA5	94	95.065	ENSEEUG00000013176	SMARCA5	100	95.065	Erinaceus_europaeus
ENSNLEG00000005383	SMARCA5	92	89.485	ENSELUG00000014653	SMARCA5	99	89.485	Esox_lucius
ENSNLEG00000005383	SMARCA5	100	98.859	ENSFCAG00000004544	SMARCA5	100	98.859	Felis_catus
ENSNLEG00000005383	SMARCA5	92	97.216	ENSFALG00000004987	SMARCA5	100	97.216	Ficedula_albicollis
ENSNLEG00000005383	SMARCA5	99	95.881	ENSFDAG00000021016	SMARCA5	100	99.496	Fukomys_damarensis
ENSNLEG00000005383	SMARCA5	99	85.043	ENSGMOG00000007519	SMARCA5	94	89.560	Gadus_morhua
ENSNLEG00000005383	SMARCA5	97	95.976	ENSGALG00000009913	SMARCA5	96	97.490	Gallus_gallus
ENSNLEG00000005383	SMARCA5	96	88.393	ENSGACG00000017238	SMARCA5	95	90.686	Gasterosteus_aculeatus
ENSNLEG00000005383	SMARCA5	96	97.038	ENSGAGG00000019882	SMARCA5	96	98.195	Gopherus_agassizii
ENSNLEG00000005383	SMARCA5	100	99.810	ENSGGOG00000012595	SMARCA5	100	99.810	Gorilla_gorilla
ENSNLEG00000005383	SMARCA5	100	98.004	ENSHGLG00000000816	-	99	98.004	Heterocephalus_glaber_female
ENSNLEG00000005383	SMARCA5	96	89.374	ENSHGLG00000000317	-	95	89.659	Heterocephalus_glaber_female
ENSNLEG00000005383	SMARCA5	96	98.211	ENSHGLG00100018421	-	100	99.396	Heterocephalus_glaber_male
ENSNLEG00000005383	SMARCA5	100	98.670	ENSSTOG00000010683	SMARCA5	99	98.670	Ictidomys_tridecemlineatus
ENSNLEG00000005383	SMARCA5	100	97.529	ENSJJAG00000014965	Smarca5	100	97.529	Jaculus_jaculus
ENSNLEG00000005383	SMARCA5	94	95.358	ENSLACG00000007091	SMARCA5	97	95.358	Latimeria_chalumnae
ENSNLEG00000005383	SMARCA5	94	92.284	ENSLOCG00000008966	SMARCA5	96	92.284	Lepisosteus_oculatus
ENSNLEG00000005383	SMARCA5	100	98.669	ENSLAFG00000007795	SMARCA5	100	98.669	Loxodonta_africana
ENSNLEG00000005383	SMARCA5	100	100.000	ENSMFAG00000043649	SMARCA5	100	100.000	Macaca_fascicularis
ENSNLEG00000005383	SMARCA5	100	100.000	ENSMMUG00000000829	SMARCA5	100	100.000	Macaca_mulatta
ENSNLEG00000005383	SMARCA5	100	100.000	ENSMNEG00000031916	SMARCA5	100	100.000	Macaca_nemestrina
ENSNLEG00000005383	SMARCA5	100	100.000	ENSMLEG00000042393	SMARCA5	100	100.000	Mandrillus_leucophaeus
ENSNLEG00000005383	SMARCA5	95	97.100	ENSMGAG00000003517	SMARCA5	99	97.100	Meleagris_gallopavo
ENSNLEG00000005383	SMARCA5	94	99.496	ENSMAUG00000015902	Smarca5	98	99.496	Mesocricetus_auratus
ENSNLEG00000005383	SMARCA5	100	99.049	ENSMICG00000003971	SMARCA5	100	99.049	Microcebus_murinus
ENSNLEG00000005383	SMARCA5	99	97.529	ENSMOCG00000016986	-	99	97.529	Microtus_ochrogaster
ENSNLEG00000005383	SMARCA5	100	95.829	ENSMODG00000000391	SMARCA5	98	96.990	Monodelphis_domestica
ENSNLEG00000005383	SMARCA5	100	97.814	ENSMUSG00000031715	Smarca5	100	97.814	Mus_musculus
ENSNLEG00000005383	SMARCA5	100	98.004	MGP_PahariEiJ_G0022862	Smarca5	100	98.004	Mus_pahari
ENSNLEG00000005383	SMARCA5	100	98.859	ENSMLUG00000000468	SMARCA5	100	98.859	Myotis_lucifugus
ENSNLEG00000005383	SMARCA5	100	98.004	ENSNGAG00000000441	Smarca5	100	98.004	Nannospalax_galili
ENSNLEG00000005383	SMARCA5	92	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSNLEG00000005383	SMARCA5	85	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSNLEG00000005383	SMARCA5	92	98.968	ENSOANG00000013921	SMARCA5	100	98.968	Ornithorhynchus_anatinus
ENSNLEG00000005383	SMARCA5	92	99.587	ENSOCUG00000013042	SMARCA5	100	99.587	Oryctolagus_cuniculus
ENSNLEG00000005383	SMARCA5	100	99.049	ENSOGAG00000009702	SMARCA5	100	99.049	Otolemur_garnettii
ENSNLEG00000005383	SMARCA5	99	98.573	ENSOARG00000010589	SMARCA5	99	98.573	Ovis_aries
ENSNLEG00000005383	SMARCA5	100	99.620	ENSPPAG00000028523	SMARCA5	100	99.620	Pan_paniscus
ENSNLEG00000005383	SMARCA5	97	93.457	ENSPPRG00000004925	SMARCA5	98	94.004	Panthera_pardus
ENSNLEG00000005383	SMARCA5	96	99.208	ENSPTIG00000020959	SMARCA5	97	99.208	Panthera_tigris_altaica
ENSNLEG00000005383	SMARCA5	100	99.715	ENSPTRG00000016472	SMARCA5	100	99.715	Pan_troglodytes
ENSNLEG00000005383	SMARCA5	100	100.000	ENSPANG00000001175	SMARCA5	100	100.000	Papio_anubis
ENSNLEG00000005383	SMARCA5	93	90.779	ENSPKIG00000015699	SMARCA5	98	89.716	Paramormyrops_kingsleyae
ENSNLEG00000005383	SMARCA5	93	91.002	ENSPKIG00000015885	SMARCA5	100	91.237	Paramormyrops_kingsleyae
ENSNLEG00000005383	SMARCA5	95	95.988	ENSPSIG00000004177	SMARCA5	100	95.988	Pelodiscus_sinensis
ENSNLEG00000005383	SMARCA5	92	90.226	ENSPMGG00000012316	SMARCA5	100	90.226	Periophthalmus_magnuspinnatus
ENSNLEG00000005383	SMARCA5	97	97.741	ENSPEMG00000008060	Smarca5	99	97.741	Peromyscus_maniculatus_bairdii
ENSNLEG00000005383	SMARCA5	61	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSNLEG00000005383	SMARCA5	96	69.882	ENSPMAG00000006011	SMARCA5	81	85.440	Petromyzon_marinus
ENSNLEG00000005383	SMARCA5	100	95.553	ENSPCIG00000003926	SMARCA5	98	96.799	Phascolarctos_cinereus
ENSNLEG00000005383	SMARCA5	100	99.905	ENSPPYG00000015091	SMARCA5	100	99.905	Pongo_abelii
ENSNLEG00000005383	SMARCA5	86	90.390	ENSPCAG00000014230	SMARCA5	90	90.390	Procavia_capensis
ENSNLEG00000005383	SMARCA5	100	96.293	ENSPCOG00000026744	SMARCA5	100	96.293	Propithecus_coquereli
ENSNLEG00000005383	SMARCA5	99	98.573	ENSPVAG00000006482	SMARCA5	100	98.573	Pteropus_vampyrus
ENSNLEG00000005383	SMARCA5	97	88.039	ENSPNAG00000027824	SMARCA5	97	90.145	Pygocentrus_nattereri
ENSNLEG00000005383	SMARCA5	95	99.296	ENSRNOG00000018149	Smarca5	100	99.296	Rattus_norvegicus
ENSNLEG00000005383	SMARCA5	100	99.810	ENSRBIG00000044644	SMARCA5	100	99.810	Rhinopithecus_bieti
ENSNLEG00000005383	SMARCA5	98	99.710	ENSRROG00000029591	SMARCA5	99	99.899	Rhinopithecus_roxellana
ENSNLEG00000005383	SMARCA5	100	99.335	ENSSBOG00000036257	SMARCA5	100	99.335	Saimiri_boliviensis_boliviensis
ENSNLEG00000005383	SMARCA5	94	98.993	ENSSHAG00000008464	SMARCA5	100	98.993	Sarcophilus_harrisii
ENSNLEG00000005383	SMARCA5	94	90.050	ENSSFOG00015013252	SMARCA5	97	90.050	Scleropages_formosus
ENSNLEG00000005383	SMARCA5	98	93.501	ENSSPUG00000007604	SMARCA5	99	96.281	Sphenodon_punctatus
ENSNLEG00000005383	SMARCA5	100	98.194	ENSSSCG00000009047	SMARCA5	100	98.194	Sus_scrofa
ENSNLEG00000005383	SMARCA5	96	95.929	ENSTGUG00000002408	SMARCA5	99	95.929	Taeniopygia_guttata
ENSNLEG00000005383	SMARCA5	98	98.837	ENSUAMG00000023495	SMARCA5	99	98.837	Ursus_americanus
ENSNLEG00000005383	SMARCA5	95	99.402	ENSUMAG00000015324	SMARCA5	97	99.402	Ursus_maritimus
ENSNLEG00000005383	SMARCA5	100	98.289	ENSVPAG00000008982	SMARCA5	100	98.289	Vicugna_pacos
ENSNLEG00000005383	SMARCA5	100	98.859	ENSVVUG00000017473	SMARCA5	100	98.859	Vulpes_vulpes
ENSNLEG00000005383	SMARCA5	95	88.767	ENSXETG00000017566	smarca5	95	93.122	Xenopus_tropicalis