EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000005625 (Gene tree)
Gene ID: 100602545
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 11938 bases
Position: chr1a:75730968-75742905
Accession: 100602545
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000006871	tRNA-synt_1g	PF09334.11	3.3e-14	1	1
ENSNLEP00000006871	Anticodon_1	PF08264.13	6.9e-30	1	1
ENSNLEP00000006871	tRNA-synt_1	PF00133.22	5.7e-172	1	2
ENSNLEP00000006871	tRNA-synt_1	PF00133.22	5.7e-172	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000007213	VARS2-201	3201	XM_003272063	ENSNLEP00000006871	1066 (aa)	XP_003272111	G1R100

Gene Model

Click here to download ENSNLEG00000005625's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000005625's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000005625	VARS2	89	51.478	ENSNLEG00000006351	VARS	97	42.785

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000005625	VARS2	90	51.259	ENSAPOG00000007396	vars2	95	50.096	Acanthochromis_polyacanthus
ENSNLEG00000005625	VARS2	99	81.910	ENSAMEG00000012997	VARS2	99	81.910	Ailuropoda_melanoleuca
ENSNLEG00000005625	VARS2	96	50.191	ENSACIG00000004344	vars2	97	50.095	Amphilophus_citrinellus
ENSNLEG00000005625	VARS2	89	51.107	ENSAOCG00000000476	vars2	95	49.904	Amphiprion_ocellaris
ENSNLEG00000005625	VARS2	89	51.158	ENSAPEG00000008646	vars2	93	49.952	Amphiprion_percula
ENSNLEG00000005625	VARS2	90	51.844	ENSATEG00000012291	vars2	96	50.621	Anabas_testudineus
ENSNLEG00000005625	VARS2	92	58.847	ENSACAG00000022093	VARS2	93	58.648	Anolis_carolinensis
ENSNLEG00000005625	VARS2	97	90.226	ENSANAG00000038018	VARS2	100	90.226	Aotus_nancymaae
ENSNLEG00000005625	VARS2	93	50.242	ENSACLG00000018673	vars2	96	50.000	Astatotilapia_calliptera
ENSNLEG00000005625	VARS2	91	52.020	ENSAMXG00000017773	vars2	93	53.472	Astyanax_mexicanus
ENSNLEG00000005625	VARS2	97	85.972	ENSBTAG00000010698	VARS2	99	85.862	Bos_taurus
ENSNLEG00000005625	VARS2	100	89.872	ENSCJAG00000019826	VARS2	100	90.338	Callithrix_jacchus
ENSNLEG00000005625	VARS2	98	81.081	ENSCAFG00000000454	VARS2	99	81.964	Canis_familiaris
ENSNLEG00000005625	VARS2	86	83.298	ENSCAFG00020019387	VARS2	95	83.351	Canis_lupus_dingo
ENSNLEG00000005625	VARS2	97	85.769	ENSCHIG00000007847	VARS2	99	85.566	Capra_hircus
ENSNLEG00000005625	VARS2	100	85.009	ENSTSYG00000009904	VARS2	100	85.942	Carlito_syrichta
ENSNLEG00000005625	VARS2	85	80.687	ENSCAPG00000017770	VARS2	99	80.687	Cavia_aperea
ENSNLEG00000005625	VARS2	97	80.506	ENSCPOG00000021834	VARS2	99	80.506	Cavia_porcellus
ENSNLEG00000005625	VARS2	100	90.311	ENSCCAG00000037907	VARS2	100	90.789	Cebus_capucinus
ENSNLEG00000005625	VARS2	100	93.510	ENSCATG00000032554	VARS2	100	93.985	Cercocebus_atys
ENSNLEG00000005625	VARS2	97	81.733	ENSCLAG00000002889	VARS2	99	81.733	Chinchilla_lanigera
ENSNLEG00000005625	VARS2	97	93.515	ENSCSAG00000008327	VARS2	100	93.515	Chlorocebus_sabaeus
ENSNLEG00000005625	VARS2	89	62.798	ENSCPBG00000021502	VARS2	96	62.798	Chrysemys_picta_bellii
ENSNLEG00000005625	VARS2	98	93.849	ENSCANG00000014991	VARS2	99	93.849	Colobus_angolensis_palliatus
ENSNLEG00000005625	VARS2	96	79.981	ENSCGRG00001021535	Vars2	99	79.849	Cricetulus_griseus_chok1gshd
ENSNLEG00000005625	VARS2	96	79.981	ENSCGRG00000014112	Vars2	99	79.849	Cricetulus_griseus_crigri
ENSNLEG00000005625	VARS2	83	53.571	ENSCSEG00000015432	vars2	93	53.571	Cynoglossus_semilaevis
ENSNLEG00000005625	VARS2	63	50.919	ENSCVAG00000017765	vars2	98	50.778	Cyprinodon_variegatus
ENSNLEG00000005625	VARS2	92	51.914	ENSDARG00000056717	vars2	94	51.921	Danio_rerio
ENSNLEG00000005625	VARS2	76	83.373	ENSDORG00000008516	Vars2	93	83.373	Dipodomys_ordii
ENSNLEG00000005625	VARS2	97	73.239	ENSETEG00000014844	VARS2	99	73.239	Echinops_telfairi
ENSNLEG00000005625	VARS2	99	84.913	ENSEASG00005019997	VARS2	99	84.913	Equus_asinus_asinus
ENSNLEG00000005625	VARS2	97	86.911	ENSECAG00000018202	VARS2	100	86.911	Equus_caballus
ENSNLEG00000005625	VARS2	67	87.379	ENSEEUG00000012591	-	68	87.379	Erinaceus_europaeus
ENSNLEG00000005625	VARS2	89	51.960	ENSELUG00000017824	vars2	95	50.962	Esox_lucius
ENSNLEG00000005625	VARS2	97	83.616	ENSFCAG00000010531	VARS2	99	83.616	Felis_catus
ENSNLEG00000005625	VARS2	97	81.861	ENSFDAG00000017216	VARS2	99	81.861	Fukomys_damarensis
ENSNLEG00000005625	VARS2	83	51.285	ENSFHEG00000013932	vars2	91	50.000	Fundulus_heteroclitus
ENSNLEG00000005625	VARS2	87	54.105	ENSGMOG00000018960	vars2	98	54.000	Gadus_morhua
ENSNLEG00000005625	VARS2	82	48.558	ENSGAFG00000004737	vars2	92	48.438	Gambusia_affinis
ENSNLEG00000005625	VARS2	86	53.674	ENSGACG00000001464	vars2	96	53.194	Gasterosteus_aculeatus
ENSNLEG00000005625	VARS2	86	61.824	ENSGAGG00000011652	VARS2	95	61.824	Gopherus_agassizii
ENSNLEG00000005625	VARS2	97	94.361	ENSGGOG00000014587	VARS2	100	94.361	Gorilla_gorilla
ENSNLEG00000005625	VARS2	89	50.607	ENSHBUG00000002448	vars2	94	50.506	Haplochromis_burtoni
ENSNLEG00000005625	VARS2	98	79.518	ENSHGLG00000012886	VARS2	97	79.518	Heterocephalus_glaber_female
ENSNLEG00000005625	VARS2	97	79.793	ENSHGLG00100016535	VARS2	99	79.793	Heterocephalus_glaber_male
ENSNLEG00000005625	VARS2	66	49.795	ENSHCOG00000017907	vars2	97	49.658	Hippocampus_comes
ENSNLEG00000005625	VARS2	87	53.542	ENSIPUG00000015573	Vars2	93	52.320	Ictalurus_punctatus
ENSNLEG00000005625	VARS2	97	85.432	ENSSTOG00000009924	VARS2	100	85.432	Ictidomys_tridecemlineatus
ENSNLEG00000005625	VARS2	97	79.603	ENSJJAG00000011144	Vars2	100	79.603	Jaculus_jaculus
ENSNLEG00000005625	VARS2	91	50.936	ENSKMAG00000001393	vars2	94	50.435	Kryptolebias_marmoratus
ENSNLEG00000005625	VARS2	88	52.152	ENSLBEG00000011949	vars2	95	49.904	Labrus_bergylta
ENSNLEG00000005625	VARS2	51	60.541	ENSLBEG00000005480	-	81	60.507	Labrus_bergylta
ENSNLEG00000005625	VARS2	90	51.911	ENSLACG00000001576	-	96	52.012	Latimeria_chalumnae
ENSNLEG00000005625	VARS2	97	83.412	ENSLAFG00000015183	VARS2	99	83.412	Loxodonta_africana
ENSNLEG00000005625	VARS2	97	93.045	ENSMFAG00000042367	VARS2	100	93.045	Macaca_fascicularis
ENSNLEG00000005625	VARS2	97	93.045	ENSMMUG00000018609	VARS2	100	93.045	Macaca_mulatta
ENSNLEG00000005625	VARS2	100	90.768	ENSMNEG00000043163	VARS2	100	93.233	Macaca_nemestrina
ENSNLEG00000005625	VARS2	100	93.601	ENSMLEG00000041728	VARS2	100	93.601	Mandrillus_leucophaeus
ENSNLEG00000005625	VARS2	93	50.097	ENSMAMG00000020339	vars2	96	49.666	Mastacembelus_armatus
ENSNLEG00000005625	VARS2	94	49.569	ENSMZEG00005017669	vars2	96	49.903	Maylandia_zebra
ENSNLEG00000005625	VARS2	97	80.038	ENSMAUG00000018946	Vars2	99	80.038	Mesocricetus_auratus
ENSNLEG00000005625	VARS2	83	88.341	ENSMICG00000005365	VARS2	100	88.341	Microcebus_murinus
ENSNLEG00000005625	VARS2	91	82.424	ENSMOCG00000014607	Vars2	99	82.424	Microtus_ochrogaster
ENSNLEG00000005625	VARS2	90	51.264	ENSMMOG00000012122	vars2	96	49.807	Mola_mola
ENSNLEG00000005625	VARS2	97	72.573	ENSMODG00000015848	VARS2	99	72.573	Monodelphis_domestica
ENSNLEG00000005625	VARS2	90	51.915	ENSMALG00000009217	vars2	98	51.815	Monopterus_albus
ENSNLEG00000005625	VARS2	97	80.587	MGP_CAROLIEiJ_G0021529	Vars2	99	80.587	Mus_caroli
ENSNLEG00000005625	VARS2	97	80.208	ENSMUSG00000038838	Vars2	99	80.208	Mus_musculus
ENSNLEG00000005625	VARS2	97	80.682	MGP_PahariEiJ_G0020523	Vars2	99	80.682	Mus_pahari
ENSNLEG00000005625	VARS2	97	80.529	MGP_SPRETEiJ_G0022436	Vars2	99	80.529	Mus_spretus
ENSNLEG00000005625	VARS2	97	83.396	ENSMPUG00000011643	VARS2	99	83.396	Mustela_putorius_furo
ENSNLEG00000005625	VARS2	98	81.019	ENSMLUG00000002356	VARS2	98	81.019	Myotis_lucifugus
ENSNLEG00000005625	VARS2	96	74.809	ENSNGAG00000020607	Vars2	100	74.484	Nannospalax_galili
ENSNLEG00000005625	VARS2	57	51.136	ENSNBRG00000001624	vars2	54	51.136	Neolamprologus_brichardi
ENSNLEG00000005625	VARS2	76	71.500	ENSMEUG00000014475	VARS2	90	71.500	Notamacropus_eugenii
ENSNLEG00000005625	VARS2	87	82.743	ENSOPRG00000000682	VARS2	90	82.743	Ochotona_princeps
ENSNLEG00000005625	VARS2	97	80.094	ENSODEG00000017965	VARS2	99	80.094	Octodon_degus
ENSNLEG00000005625	VARS2	90	36.631	ENSONIG00000004734	vars2	98	36.533	Oreochromis_niloticus
ENSNLEG00000005625	VARS2	79	58.803	ENSOANG00000000398	-	99	58.573	Ornithorhynchus_anatinus
ENSNLEG00000005625	VARS2	99	76.839	ENSOCUG00000021496	VARS2	65	77.260	Oryctolagus_cuniculus
ENSNLEG00000005625	VARS2	91	51.584	ENSORLG00000010632	vars2	95	50.766	Oryzias_latipes
ENSNLEG00000005625	VARS2	91	51.542	ENSORLG00020018584	vars2	94	50.726	Oryzias_latipes_hni
ENSNLEG00000005625	VARS2	91	51.443	ENSORLG00015010408	vars2	95	50.480	Oryzias_latipes_hsok
ENSNLEG00000005625	VARS2	90	52.096	ENSOMEG00000008360	vars2	95	50.668	Oryzias_melastigma
ENSNLEG00000005625	VARS2	100	85.310	ENSOGAG00000006087	VARS2	100	85.310	Otolemur_garnettii
ENSNLEG00000005625	VARS2	97	84.463	ENSOARG00000010844	VARS2	99	84.270	Ovis_aries
ENSNLEG00000005625	VARS2	100	93.455	ENSPPAG00000041141	VARS2	100	94.361	Pan_paniscus
ENSNLEG00000005625	VARS2	99	82.721	ENSPPRG00000006751	VARS2	99	82.721	Panthera_pardus
ENSNLEG00000005625	VARS2	99	82.629	ENSPTIG00000017799	VARS2	98	84.839	Panthera_tigris_altaica
ENSNLEG00000005625	VARS2	100	93.455	ENSPTRG00000034497	VARS2	100	94.361	Pan_troglodytes
ENSNLEG00000005625	VARS2	100	93.236	ENSPANG00000018481	VARS2	100	94.482	Papio_anubis
ENSNLEG00000005625	VARS2	90	54.230	ENSPKIG00000011372	vars2	95	53.085	Paramormyrops_kingsleyae
ENSNLEG00000005625	VARS2	58	64.025	ENSPSIG00000006206	VARS2	92	63.580	Pelodiscus_sinensis
ENSNLEG00000005625	VARS2	93	51.453	ENSPMGG00000000465	vars2	95	51.456	Periophthalmus_magnuspinnatus
ENSNLEG00000005625	VARS2	97	80.930	ENSPEMG00000014691	Vars2	99	80.930	Peromyscus_maniculatus_bairdii
ENSNLEG00000005625	VARS2	97	74.456	ENSPCIG00000015040	VARS2	99	74.456	Phascolarctos_cinereus
ENSNLEG00000005625	VARS2	89	52.424	ENSPFOG00000017616	vars2	94	51.381	Poecilia_formosa
ENSNLEG00000005625	VARS2	89	52.064	ENSPLAG00000019778	vars2	95	51.032	Poecilia_latipinna
ENSNLEG00000005625	VARS2	89	52.165	ENSPMEG00000011123	vars2	94	51.131	Poecilia_mexicana
ENSNLEG00000005625	VARS2	88	47.276	ENSPREG00000014998	vars2	95	46.177	Poecilia_reticulata
ENSNLEG00000005625	VARS2	97	94.549	ENSPPYG00000016424	VARS2	100	94.549	Pongo_abelii
ENSNLEG00000005625	VARS2	81	76.578	ENSPCAG00000006946	VARS2	84	76.578	Procavia_capensis
ENSNLEG00000005625	VARS2	99	85.519	ENSPCOG00000014839	VARS2	99	85.519	Propithecus_coquereli
ENSNLEG00000005625	VARS2	97	83.835	ENSPVAG00000004197	VARS2	99	83.835	Pteropus_vampyrus
ENSNLEG00000005625	VARS2	80	56.065	ENSPNYG00000010314	vars2	97	56.065	Pundamilia_nyererei
ENSNLEG00000005625	VARS2	91	53.175	ENSPNAG00000026793	vars2	93	52.981	Pygocentrus_nattereri
ENSNLEG00000005625	VARS2	97	80.190	ENSRNOG00000000833	Vars2	99	80.190	Rattus_norvegicus
ENSNLEG00000005625	VARS2	97	93.421	ENSRBIG00000032725	VARS2	100	93.421	Rhinopithecus_bieti
ENSNLEG00000005625	VARS2	97	93.515	ENSRROG00000043847	VARS2	100	93.515	Rhinopithecus_roxellana
ENSNLEG00000005625	VARS2	100	87.871	ENSSBOG00000033240	VARS2	100	88.230	Saimiri_boliviensis_boliviensis
ENSNLEG00000005625	VARS2	97	73.037	ENSSHAG00000009307	VARS2	100	73.037	Sarcophilus_harrisii
ENSNLEG00000005625	VARS2	91	52.485	ENSSFOG00015016187	vars2	94	51.167	Scleropages_formosus
ENSNLEG00000005625	VARS2	91	52.563	ENSSMAG00000020842	vars2	95	51.949	Scophthalmus_maximus
ENSNLEG00000005625	VARS2	91	51.338	ENSSDUG00000011598	vars2	96	50.336	Seriola_dumerili
ENSNLEG00000005625	VARS2	89	51.963	ENSSLDG00000015492	vars2	96	49.807	Seriola_lalandi_dorsalis
ENSNLEG00000005625	VARS2	56	90.511	ENSSARG00000003786	-	70	90.511	Sorex_araneus
ENSNLEG00000005625	VARS2	89	56.517	ENSSPUG00000014700	VARS2	96	56.413	Sphenodon_punctatus
ENSNLEG00000005625	VARS2	90	50.051	ENSSPAG00000004654	vars2	95	48.978	Stegastes_partitus
ENSNLEG00000005625	VARS2	96	87.003	ENSSSCG00000001384	VARS2	99	87.374	Sus_scrofa
ENSNLEG00000005625	VARS2	91	52.800	ENSTRUG00000005264	vars2	97	51.834	Takifugu_rubripes
ENSNLEG00000005625	VARS2	97	50.283	ENSTNIG00000005916	vars2	97	51.224	Tetraodon_nigroviridis
ENSNLEG00000005625	VARS2	51	91.045	ENSTBEG00000007976	-	53	91.045	Tupaia_belangeri
ENSNLEG00000005625	VARS2	91	89.686	ENSTTRG00000012243	VARS2	100	73.308	Tursiops_truncatus
ENSNLEG00000005625	VARS2	97	82.846	ENSUAMG00000026124	VARS2	99	83.696	Ursus_americanus
ENSNLEG00000005625	VARS2	97	83.868	ENSUMAG00000019894	VARS2	99	83.868	Ursus_maritimus
ENSNLEG00000005625	VARS2	98	81.912	ENSVVUG00000010754	VARS2	95	81.912	Vulpes_vulpes
ENSNLEG00000005625	VARS2	88	53.782	ENSXETG00000003036	vars2	100	53.782	Xenopus_tropicalis
ENSNLEG00000005625	VARS2	89	53.074	ENSXCOG00000003455	vars2	96	51.683	Xiphophorus_couchianus
ENSNLEG00000005625	VARS2	91	51.190	ENSXMAG00000013523	vars2	94	50.584	Xiphophorus_maculatus