EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000006007 (Gene tree)
Gene ID: 100596229
Gene Symbol: SF3B2
Alias: Cus1|SAP145|SF3b1|SF3b145
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 16558 bases
Position: chr4:86460201-86476758
Accession: 100596229
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000045663	DUF382	PF04037.13	1.6e-59	1	1
ENSNLEP00000007295	DUF382	PF04037.13	1.6e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000036731	SF3B2-202	2604	-	ENSNLEP00000045663	867 (aa)	-	A0A2I3HPW1
ENSNLET00000007656	SF3B2-201	2655	XM_003274222	ENSNLEP00000007295	884 (aa)	XP_003274270	G1R273

Gene Model

Click here to download ENSNLEG00000006007's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000006007's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000006007	SF3B2	100	94.469	ENSG00000087365	SF3B2	99	95.860	Homo_sapiens
ENSNLEG00000006007	SF3B2	95	66.358	ENSAPOG00000001974	sf3b2	82	70.800	Acanthochromis_polyacanthus
ENSNLEG00000006007	SF3B2	100	91.019	ENSAMEG00000017206	SF3B2	84	94.915	Ailuropoda_melanoleuca
ENSNLEG00000006007	SF3B2	97	66.438	ENSACIG00000000624	sf3b2	86	71.354	Amphilophus_citrinellus
ENSNLEG00000006007	SF3B2	97	67.117	ENSAOCG00000009207	sf3b2	86	71.686	Amphiprion_ocellaris
ENSNLEG00000006007	SF3B2	97	67.005	ENSAPEG00000002762	sf3b2	87	70.685	Amphiprion_percula
ENSNLEG00000006007	SF3B2	100	64.474	ENSACAG00000008615	SF3B2	85	67.801	Anolis_carolinensis
ENSNLEG00000006007	SF3B2	100	93.812	ENSANAG00000029120	SF3B2	100	93.812	Aotus_nancymaae
ENSNLEG00000006007	SF3B2	86	71.026	ENSACLG00000014771	sf3b2	87	71.373	Astatotilapia_calliptera
ENSNLEG00000006007	SF3B2	59	83.992	ENSAMXG00000007929	sf3b2	94	71.917	Astyanax_mexicanus
ENSNLEG00000006007	SF3B2	100	90.132	ENSBTAG00000002778	SF3B2	84	93.864	Bos_taurus
ENSNLEG00000006007	SF3B2	60	49.556	WBGene00021004	sftb-2	95	48.709	Caenorhabditis_elegans
ENSNLEG00000006007	SF3B2	100	94.033	ENSCJAG00000001656	SF3B2	100	94.033	Callithrix_jacchus
ENSNLEG00000006007	SF3B2	100	91.328	ENSCAFG00000013033	SF3B2	84	94.909	Canis_familiaris
ENSNLEG00000006007	SF3B2	100	91.328	ENSCAFG00020015382	SF3B2	84	94.909	Canis_lupus_dingo
ENSNLEG00000006007	SF3B2	100	90.560	ENSCHIG00000011211	SF3B2	84	93.995	Capra_hircus
ENSNLEG00000006007	SF3B2	100	92.070	ENSTSYG00000000959	SF3B2	100	92.920	Carlito_syrichta
ENSNLEG00000006007	SF3B2	57	96.970	ENSCAPG00000006065	SF3B2	97	100.000	Cavia_aperea
ENSNLEG00000006007	SF3B2	91	89.617	ENSCPOG00000008294	SF3B2	100	90.559	Cavia_porcellus
ENSNLEG00000006007	SF3B2	100	94.033	ENSCCAG00000035256	SF3B2	100	94.033	Cebus_capucinus
ENSNLEG00000006007	SF3B2	100	94.469	ENSCATG00000042240	SF3B2	100	94.469	Cercocebus_atys
ENSNLEG00000006007	SF3B2	100	91.246	ENSCLAG00000016852	SF3B2	100	92.108	Chinchilla_lanigera
ENSNLEG00000006007	SF3B2	100	94.469	ENSCSAG00000008121	SF3B2	100	94.469	Chlorocebus_sabaeus
ENSNLEG00000006007	SF3B2	91	92.784	ENSCHOG00000001476	SF3B2	92	92.784	Choloepus_hoffmanni
ENSNLEG00000006007	SF3B2	85	77.907	ENSCPBG00000022465	SF3B2	87	84.389	Chrysemys_picta_bellii
ENSNLEG00000006007	SF3B2	74	57.489	ENSCING00000005665	-	99	57.829	Ciona_intestinalis
ENSNLEG00000006007	SF3B2	60	65.177	ENSCSAVG00000002029	-	99	57.342	Ciona_savignyi
ENSNLEG00000006007	SF3B2	100	94.469	ENSCANG00000039680	SF3B2	100	94.469	Colobus_angolensis_palliatus
ENSNLEG00000006007	SF3B2	100	91.134	ENSCGRG00001015741	Sf3b2	100	91.995	Cricetulus_griseus_chok1gshd
ENSNLEG00000006007	SF3B2	100	91.134	ENSCGRG00000018110	Sf3b2	100	91.995	Cricetulus_griseus_crigri
ENSNLEG00000006007	SF3B2	59	81.887	ENSCSEG00000000230	sf3b2	78	74.028	Cynoglossus_semilaevis
ENSNLEG00000006007	SF3B2	97	66.090	ENSCVAG00000003357	sf3b2	85	70.658	Cyprinodon_variegatus
ENSNLEG00000006007	SF3B2	60	83.240	ENSDARG00000018049	sf3b2	86	69.730	Danio_rerio
ENSNLEG00000006007	SF3B2	85	92.790	ENSDNOG00000009484	SF3B2	93	93.324	Dasypus_novemcinctus
ENSNLEG00000006007	SF3B2	100	90.807	ENSDORG00000002495	Sf3b2	100	91.667	Dipodomys_ordii
ENSNLEG00000006007	SF3B2	82	85.880	ENSETEG00000020284	SF3B2	85	85.714	Echinops_telfairi
ENSNLEG00000006007	SF3B2	98	57.638	ENSEBUG00000013703	sf3b2	99	57.592	Eptatretus_burgeri
ENSNLEG00000006007	SF3B2	100	91.228	ENSEASG00005004508	SF3B2	84	94.654	Equus_asinus_asinus
ENSNLEG00000006007	SF3B2	100	91.228	ENSECAG00000024461	SF3B2	84	94.654	Equus_caballus
ENSNLEG00000006007	SF3B2	63	99.153	ENSEEUG00000014278	-	60	99.153	Erinaceus_europaeus
ENSNLEG00000006007	SF3B2	97	63.095	ENSELUG00000005586	sf3b2	88	68.448	Esox_lucius
ENSNLEG00000006007	SF3B2	100	91.438	ENSFCAG00000013289	SF3B2	84	95.039	Felis_catus
ENSNLEG00000006007	SF3B2	81	65.833	ENSFALG00000014653	SF3B2	98	66.481	Ficedula_albicollis
ENSNLEG00000006007	SF3B2	100	90.471	ENSFDAG00000019806	SF3B2	100	91.749	Fukomys_damarensis
ENSNLEG00000006007	SF3B2	97	65.859	ENSFHEG00000020968	sf3b2	85	70.317	Fundulus_heteroclitus
ENSNLEG00000006007	SF3B2	75	72.470	ENSGMOG00000012131	sf3b2	96	76.589	Gadus_morhua
ENSNLEG00000006007	SF3B2	97	66.400	ENSGAFG00000001675	sf3b2	85	71.202	Gambusia_affinis
ENSNLEG00000006007	SF3B2	60	84.340	ENSGACG00000019012	sf3b2	96	75.587	Gasterosteus_aculeatus
ENSNLEG00000006007	SF3B2	100	74.172	ENSGAGG00000023916	SF3B2	86	82.736	Gopherus_agassizii
ENSNLEG00000006007	SF3B2	100	94.469	ENSGGOG00000028448	SF3B2	100	96.034	Gorilla_gorilla
ENSNLEG00000006007	SF3B2	86	70.897	ENSHBUG00000017349	sf3b2	87	71.373	Haplochromis_burtoni
ENSNLEG00000006007	SF3B2	100	91.134	ENSHGLG00000010807	SF3B2	100	91.995	Heterocephalus_glaber_female
ENSNLEG00000006007	SF3B2	100	91.300	ENSHGLG00100006361	SF3B2	100	92.146	Heterocephalus_glaber_male
ENSNLEG00000006007	SF3B2	97	62.698	ENSHCOG00000016203	sf3b2	97	62.108	Hippocampus_comes
ENSNLEG00000006007	SF3B2	97	62.796	ENSIPUG00000009383	sf3b2	85	69.764	Ictalurus_punctatus
ENSNLEG00000006007	SF3B2	100	91.740	ENSSTOG00000028892	SF3B2	100	92.588	Ictidomys_tridecemlineatus
ENSNLEG00000006007	SF3B2	100	90.716	ENSJJAG00000018193	Sf3b2	100	92.022	Jaculus_jaculus
ENSNLEG00000006007	SF3B2	60	85.687	ENSKMAG00000020181	sf3b2	84	70.997	Kryptolebias_marmoratus
ENSNLEG00000006007	SF3B2	97	65.490	ENSLBEG00000027739	sf3b2	88	75.389	Labrus_bergylta
ENSNLEG00000006007	SF3B2	80	77.523	ENSLACG00000010429	SF3B2	93	72.577	Latimeria_chalumnae
ENSNLEG00000006007	SF3B2	100	90.604	ENSLAFG00000002128	SF3B2	84	94.393	Loxodonta_africana
ENSNLEG00000006007	SF3B2	100	94.365	ENSMFAG00000003064	SF3B2	100	94.365	Macaca_fascicularis
ENSNLEG00000006007	SF3B2	100	89.744	ENSMMUG00000011743	SF3B2	100	90.594	Macaca_mulatta
ENSNLEG00000006007	SF3B2	100	94.358	ENSMNEG00000034437	SF3B2	100	94.358	Macaca_nemestrina
ENSNLEG00000006007	SF3B2	100	94.248	ENSMLEG00000029373	SF3B2	100	94.248	Mandrillus_leucophaeus
ENSNLEG00000006007	SF3B2	85	72.165	ENSMAMG00000014103	sf3b2	86	72.108	Mastacembelus_armatus
ENSNLEG00000006007	SF3B2	86	71.026	ENSMZEG00005020789	sf3b2	86	71.373	Maylandia_zebra
ENSNLEG00000006007	SF3B2	64	94.722	ENSMAUG00000017040	Sf3b2	100	94.722	Mesocricetus_auratus
ENSNLEG00000006007	SF3B2	100	92.144	ENSMICG00000008565	-	100	93.010	Microcebus_murinus
ENSNLEG00000006007	SF3B2	100	88.852	ENSMICG00000016942	-	86	90.933	Microcebus_murinus
ENSNLEG00000006007	SF3B2	100	91.021	ENSMOCG00000003136	Sf3b2	100	91.883	Microtus_ochrogaster
ENSNLEG00000006007	SF3B2	97	64.059	ENSMMOG00000012928	sf3b2	86	69.430	Mola_mola
ENSNLEG00000006007	SF3B2	85	87.203	ENSMODG00000008490	-	91	89.314	Monodelphis_domestica
ENSNLEG00000006007	SF3B2	73	83.696	ENSMODG00000025020	-	99	83.385	Monodelphis_domestica
ENSNLEG00000006007	SF3B2	86	67.974	ENSMALG00000015137	sf3b2	84	69.906	Monopterus_albus
ENSNLEG00000006007	SF3B2	100	90.123	MGP_CAROLIEiJ_G0022539	Sf3b2	100	90.981	Mus_caroli
ENSNLEG00000006007	SF3B2	100	90.909	ENSMUSG00000024853	Sf3b2	100	91.770	Mus_musculus
ENSNLEG00000006007	SF3B2	100	90.909	MGP_PahariEiJ_G0014036	Sf3b2	100	91.770	Mus_pahari
ENSNLEG00000006007	SF3B2	100	90.797	MGP_SPRETEiJ_G0023453	Sf3b2	100	91.657	Mus_spretus
ENSNLEG00000006007	SF3B2	100	91.218	ENSMPUG00000011349	SF3B2	84	94.778	Mustela_putorius_furo
ENSNLEG00000006007	SF3B2	100	90.022	ENSMLUG00000011136	SF3B2	84	93.864	Myotis_lucifugus
ENSNLEG00000006007	SF3B2	100	91.134	ENSNGAG00000012103	Sf3b2	100	91.995	Nannospalax_galili
ENSNLEG00000006007	SF3B2	77	89.773	ENSMEUG00000000019	SF3B2	79	89.773	Notamacropus_eugenii
ENSNLEG00000006007	SF3B2	100	88.600	ENSODEG00000017764	SF3B2	100	88.488	Octodon_degus
ENSNLEG00000006007	SF3B2	97	66.367	ENSONIG00000013068	sf3b2	87	72.464	Oreochromis_niloticus
ENSNLEG00000006007	SF3B2	87	76.768	ENSOANG00000012482	SF3B2	96	78.249	Ornithorhynchus_anatinus
ENSNLEG00000006007	SF3B2	63	63.818	ENSOCUG00000024154	-	100	64.000	Oryctolagus_cuniculus
ENSNLEG00000006007	SF3B2	97	65.870	ENSORLG00000008235	sf3b2	85	71.206	Oryzias_latipes
ENSNLEG00000006007	SF3B2	97	65.870	ENSORLG00020005357	sf3b2	87	71.206	Oryzias_latipes_hni
ENSNLEG00000006007	SF3B2	97	65.984	ENSORLG00015022454	sf3b2	82	75.195	Oryzias_latipes_hsok
ENSNLEG00000006007	SF3B2	87	69.406	ENSOMEG00000017480	sf3b2	85	70.933	Oryzias_melastigma
ENSNLEG00000006007	SF3B2	100	86.784	ENSOGAG00000005799	SF3B2	100	87.832	Otolemur_garnettii
ENSNLEG00000006007	SF3B2	100	87.556	ENSOARG00000002125	SF3B2	99	93.952	Ovis_aries
ENSNLEG00000006007	SF3B2	100	95.344	ENSPPAG00000007359	SF3B2	100	95.344	Pan_paniscus
ENSNLEG00000006007	SF3B2	100	91.438	ENSPPRG00000013334	SF3B2	84	95.039	Panthera_pardus
ENSNLEG00000006007	SF3B2	100	91.328	ENSPTIG00000015022	SF3B2	84	95.039	Panthera_tigris_altaica
ENSNLEG00000006007	SF3B2	100	95.667	ENSPTRG00000003912	SF3B2	100	95.667	Pan_troglodytes
ENSNLEG00000006007	SF3B2	100	94.469	ENSPANG00000008593	SF3B2	100	94.469	Papio_anubis
ENSNLEG00000006007	SF3B2	97	64.373	ENSPKIG00000016576	sf3b2	86	76.875	Paramormyrops_kingsleyae
ENSNLEG00000006007	SF3B2	94	75.972	ENSPSIG00000003158	SF3B2	100	84.185	Pelodiscus_sinensis
ENSNLEG00000006007	SF3B2	75	79.813	ENSPMGG00000000819	sf3b2	86	65.415	Periophthalmus_magnuspinnatus
ENSNLEG00000006007	SF3B2	93	79.733	ENSPEMG00000015451	-	91	82.000	Peromyscus_maniculatus_bairdii
ENSNLEG00000006007	SF3B2	100	91.246	ENSPEMG00000015437	Sf3b2	100	92.108	Peromyscus_maniculatus_bairdii
ENSNLEG00000006007	SF3B2	85	86.658	ENSPCIG00000008381	SF3B2	87	88.771	Phascolarctos_cinereus
ENSNLEG00000006007	SF3B2	97	65.865	ENSPFOG00000002552	sf3b2	85	71.334	Poecilia_formosa
ENSNLEG00000006007	SF3B2	97	65.865	ENSPLAG00000001471	sf3b2	85	71.466	Poecilia_latipinna
ENSNLEG00000006007	SF3B2	97	65.711	ENSPMEG00000013180	sf3b2	85	71.164	Poecilia_mexicana
ENSNLEG00000006007	SF3B2	86	70.434	ENSPREG00000002665	sf3b2	85	71.053	Poecilia_reticulata
ENSNLEG00000006007	SF3B2	76	90.936	ENSPPYG00000003034	-	99	92.059	Pongo_abelii
ENSNLEG00000006007	SF3B2	100	90.340	ENSPCAG00000005129	SF3B2	84	94.256	Procavia_capensis
ENSNLEG00000006007	SF3B2	100	93.805	ENSPCOG00000025375	SF3B2	100	93.805	Propithecus_coquereli
ENSNLEG00000006007	SF3B2	55	96.262	ENSPVAG00000016975	-	54	96.262	Pteropus_vampyrus
ENSNLEG00000006007	SF3B2	56	99.561	ENSPVAG00000005466	-	79	99.561	Pteropus_vampyrus
ENSNLEG00000006007	SF3B2	82	70.725	ENSPNYG00000023594	sf3b2	92	70.805	Pundamilia_nyererei
ENSNLEG00000006007	SF3B2	59	84.082	ENSPNAG00000001891	sf3b2	86	69.962	Pygocentrus_nattereri
ENSNLEG00000006007	SF3B2	100	91.134	ENSRNOG00000020412	Sf3b2	100	91.995	Rattus_norvegicus
ENSNLEG00000006007	SF3B2	100	94.358	ENSRBIG00000034065	SF3B2	100	94.358	Rhinopithecus_bieti
ENSNLEG00000006007	SF3B2	100	94.358	ENSRROG00000034496	SF3B2	100	94.358	Rhinopithecus_roxellana
ENSNLEG00000006007	SF3B2	100	87.922	ENSSBOG00000026337	SF3B2	100	87.978	Saimiri_boliviensis_boliviensis
ENSNLEG00000006007	SF3B2	96	65.896	ENSSHAG00000018043	-	89	71.111	Sarcophilus_harrisii
ENSNLEG00000006007	SF3B2	85	81.795	ENSSHAG00000010933	-	84	82.857	Sarcophilus_harrisii
ENSNLEG00000006007	SF3B2	97	64.537	ENSSFOG00015021125	sf3b2	86	71.795	Scleropages_formosus
ENSNLEG00000006007	SF3B2	59	85.389	ENSSMAG00000004079	sf3b2	88	71.912	Scophthalmus_maximus
ENSNLEG00000006007	SF3B2	75	85.199	ENSSDUG00000008499	sf3b2	85	69.821	Seriola_dumerili
ENSNLEG00000006007	SF3B2	59	85.958	ENSSLDG00000006838	sf3b2	86	71.953	Seriola_lalandi_dorsalis
ENSNLEG00000006007	SF3B2	54	99.206	ENSSARG00000003707	-	52	99.206	Sorex_araneus
ENSNLEG00000006007	SF3B2	100	75.280	ENSSPUG00000009198	SF3B2	85	81.167	Sphenodon_punctatus
ENSNLEG00000006007	SF3B2	97	66.963	ENSSPAG00000004406	sf3b2	86	72.300	Stegastes_partitus
ENSNLEG00000006007	SF3B2	100	90.450	ENSSSCG00000012957	SF3B2	84	93.995	Sus_scrofa
ENSNLEG00000006007	SF3B2	81	76.692	ENSTRUG00000007611	sf3b2	88	69.659	Takifugu_rubripes
ENSNLEG00000006007	SF3B2	87	66.836	ENSTNIG00000007441	sf3b2	87	66.138	Tetraodon_nigroviridis
ENSNLEG00000006007	SF3B2	91	84.392	ENSTBEG00000004258	SF3B2	82	93.321	Tupaia_belangeri
ENSNLEG00000006007	SF3B2	100	90.889	ENSTTRG00000014339	SF3B2	84	94.386	Tursiops_truncatus
ENSNLEG00000006007	SF3B2	100	89.474	ENSUAMG00000020754	SF3B2	82	93.886	Ursus_americanus
ENSNLEG00000006007	SF3B2	100	91.438	ENSUMAG00000010994	SF3B2	84	95.039	Ursus_maritimus
ENSNLEG00000006007	SF3B2	69	98.305	ENSVPAG00000008695	SF3B2	62	98.305	Vicugna_pacos
ENSNLEG00000006007	SF3B2	100	91.218	ENSVVUG00000027029	SF3B2	84	94.778	Vulpes_vulpes
ENSNLEG00000006007	SF3B2	87	69.299	ENSXETG00000008422	sf3b2	87	75.072	Xenopus_tropicalis
ENSNLEG00000006007	SF3B2	60	85.283	ENSXCOG00000008943	sf3b2	84	75.430	Xiphophorus_couchianus
ENSNLEG00000006007	SF3B2	60	85.283	ENSXMAG00000008467	sf3b2	85	71.073	Xiphophorus_maculatus