EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000006351 (Gene tree)
Gene ID: 100593367
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 18354 bases
Position: chr1a:76604126-76622479
Accession: 100593367
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000007738	tRNA-synt_1g	PF09334.11	2e-10	1	1
ENSNLEP00000007738	Anticodon_1	PF08264.13	1.8e-32	1	1
ENSNLEP00000033837	Anticodon_1	PF08264.13	2.4e-27	1	1
ENSNLEP00000007738	tRNA-synt_1	PF00133.22	4.8e-201	1	1
ENSNLEP00000033837	tRNA-synt_1	PF00133.22	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000049913	VARS-202	1206	-	ENSNLEP00000033837	401 (aa)	-	A0A2I3GRE7
ENSNLET00000008111	VARS-201	4306	XM_003272123	ENSNLEP00000007738	1264 (aa)	XP_003272171	G1R3G6

Gene Model

Click here to download ENSNLEG00000006351's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000006351's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000006351	VARS	97	42.785	ENSNLEG00000005625	VARS2	89	51.478

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000006351	VARS	100	98.734	ENSG00000204394	VARS	100	98.851	Homo_sapiens
ENSNLEG00000006351	VARS	98	64.635	ENSAPOG00000020921	vars	99	64.395	Acanthochromis_polyacanthus
ENSNLEG00000006351	VARS	98	64.635	ENSAPOG00000020691	vars	99	64.395	Acanthochromis_polyacanthus
ENSNLEG00000006351	VARS	100	94.625	ENSAMEG00000006417	VARS	100	94.625	Ailuropoda_melanoleuca
ENSNLEG00000006351	VARS	100	65.569	ENSACIG00000013752	vars	100	65.330	Amphilophus_citrinellus
ENSNLEG00000006351	VARS	100	64.624	ENSAOCG00000002447	vars	100	64.280	Amphiprion_ocellaris
ENSNLEG00000006351	VARS	100	64.624	ENSAPEG00000010638	vars	99	64.642	Amphiprion_percula
ENSNLEG00000006351	VARS	100	64.460	ENSATEG00000020219	vars	100	64.224	Anabas_testudineus
ENSNLEG00000006351	VARS	90	70.165	ENSACAG00000029133	-	99	69.991	Anolis_carolinensis
ENSNLEG00000006351	VARS	89	59.459	ENSACAG00000017289	-	100	61.944	Anolis_carolinensis
ENSNLEG00000006351	VARS	100	97.310	ENSANAG00000015453	VARS	100	97.310	Aotus_nancymaae
ENSNLEG00000006351	VARS	100	64.961	ENSACLG00000025699	vars	97	64.724	Astatotilapia_calliptera
ENSNLEG00000006351	VARS	94	65.638	ENSAMXG00000017716	vars	95	65.638	Astyanax_mexicanus
ENSNLEG00000006351	VARS	100	94.383	ENSBTAG00000005631	VARS	100	94.383	Bos_taurus
ENSNLEG00000006351	VARS	100	97.073	ENSCJAG00000002604	VARS	100	97.073	Callithrix_jacchus
ENSNLEG00000006351	VARS	100	93.908	ENSCAFG00000000636	VARS	100	93.908	Canis_familiaris
ENSNLEG00000006351	VARS	94	93.750	ENSCAFG00020020790	VARS	96	93.750	Canis_lupus_dingo
ENSNLEG00000006351	VARS	100	94.462	ENSCHIG00000011008	VARS	100	94.462	Capra_hircus
ENSNLEG00000006351	VARS	100	95.491	ENSTSYG00000001567	VARS	100	95.491	Carlito_syrichta
ENSNLEG00000006351	VARS	100	87.136	ENSCAPG00000013736	VARS	99	89.965	Cavia_aperea
ENSNLEG00000006351	VARS	100	91.139	ENSCPOG00000000870	VARS	100	91.139	Cavia_porcellus
ENSNLEG00000006351	VARS	100	97.231	ENSCCAG00000035656	VARS	100	97.231	Cebus_capucinus
ENSNLEG00000006351	VARS	100	97.785	ENSCATG00000022394	VARS	100	97.785	Cercocebus_atys
ENSNLEG00000006351	VARS	88	89.589	ENSCLAG00000009470	VARS	92	89.589	Chinchilla_lanigera
ENSNLEG00000006351	VARS	100	98.259	ENSCSAG00000008784	VARS	100	98.259	Chlorocebus_sabaeus
ENSNLEG00000006351	VARS	100	59.466	ENSCPBG00000007943	VARS	96	74.025	Chrysemys_picta_bellii
ENSNLEG00000006351	VARS	100	97.943	ENSCANG00000033570	VARS	100	97.943	Colobus_angolensis_palliatus
ENSNLEG00000006351	VARS	100	92.484	ENSCGRG00001005686	Vars	100	92.484	Cricetulus_griseus_chok1gshd
ENSNLEG00000006351	VARS	100	88.592	ENSCGRG00000013352	Vars	78	87.270	Cricetulus_griseus_crigri
ENSNLEG00000006351	VARS	100	64.743	ENSCSEG00000019652	vars	100	64.585	Cynoglossus_semilaevis
ENSNLEG00000006351	VARS	100	65.035	ENSCVAG00000022398	vars	100	65.035	Cyprinodon_variegatus
ENSNLEG00000006351	VARS	100	64.701	ENSDARG00000044575	vars	100	64.697	Danio_rerio
ENSNLEG00000006351	VARS	73	85.809	ENSDNOG00000038678	-	100	91.809	Dasypus_novemcinctus
ENSNLEG00000006351	VARS	100	89.078	ENSDORG00000016433	Vars	95	92.474	Dipodomys_ordii
ENSNLEG00000006351	VARS	66	90.265	ENSETEG00000003824	VARS	76	85.533	Echinops_telfairi
ENSNLEG00000006351	VARS	100	51.202	ENSEBUG00000004637	vars	100	61.813	Eptatretus_burgeri
ENSNLEG00000006351	VARS	75	62.389	ENSEBUG00000007086	vars	84	69.284	Eptatretus_burgeri
ENSNLEG00000006351	VARS	100	95.174	ENSEASG00005015673	VARS	100	95.174	Equus_asinus_asinus
ENSNLEG00000006351	VARS	100	94.150	ENSECAG00000014620	VARS	100	94.625	Equus_caballus
ENSNLEG00000006351	VARS	83	92.734	ENSEEUG00000004116	VARS	83	92.734	Erinaceus_europaeus
ENSNLEG00000006351	VARS	100	64.225	ENSELUG00000006550	vars	97	64.253	Esox_lucius
ENSNLEG00000006351	VARS	100	94.304	ENSFCAG00000004510	VARS	100	94.304	Felis_catus
ENSNLEG00000006351	VARS	82	91.237	ENSFDAG00000011401	VARS	100	91.237	Fukomys_damarensis
ENSNLEG00000006351	VARS	100	65.035	ENSFHEG00000010672	vars	100	65.268	Fundulus_heteroclitus
ENSNLEG00000006351	VARS	100	58.373	ENSGMOG00000014908	vars	97	65.890	Gadus_morhua
ENSNLEG00000006351	VARS	100	65.423	ENSGAFG00000021630	vars	100	65.423	Gambusia_affinis
ENSNLEG00000006351	VARS	92	66.332	ENSGACG00000009601	vars	98	66.000	Gasterosteus_aculeatus
ENSNLEG00000006351	VARS	50	64.984	ENSGAGG00000006508	-	91	64.511	Gopherus_agassizii
ENSNLEG00000006351	VARS	100	52.868	ENSGAGG00000006067	-	96	78.182	Gopherus_agassizii
ENSNLEG00000006351	VARS	100	98.813	ENSGGOG00000011364	VARS	100	98.813	Gorilla_gorilla
ENSNLEG00000006351	VARS	100	64.884	ENSHBUG00000017151	vars	97	64.646	Haplochromis_burtoni
ENSNLEG00000006351	VARS	100	90.269	ENSHGLG00000011646	VARS	100	89.953	Heterocephalus_glaber_female
ENSNLEG00000006351	VARS	100	80.320	ENSHGLG00100018062	VARS	100	82.641	Heterocephalus_glaber_male
ENSNLEG00000006351	VARS	99	64.446	ENSHCOG00000012198	vars	99	64.386	Hippocampus_comes
ENSNLEG00000006351	VARS	100	65.136	ENSIPUG00000005218	vars	100	65.136	Ictalurus_punctatus
ENSNLEG00000006351	VARS	100	94.229	ENSSTOG00000013112	VARS	100	94.229	Ictidomys_tridecemlineatus
ENSNLEG00000006351	VARS	100	72.816	ENSJJAG00000015343	-	100	71.519	Jaculus_jaculus
ENSNLEG00000006351	VARS	100	91.139	ENSJJAG00000019749	-	100	90.506	Jaculus_jaculus
ENSNLEG00000006351	VARS	100	64.929	ENSKMAG00000009455	vars	100	64.692	Kryptolebias_marmoratus
ENSNLEG00000006351	VARS	100	64.664	ENSLBEG00000010341	vars	100	64.427	Labrus_bergylta
ENSNLEG00000006351	VARS	94	62.284	ENSLACG00000015232	VARS	99	62.695	Latimeria_chalumnae
ENSNLEG00000006351	VARS	100	66.250	ENSLOCG00000004240	vars	100	66.250	Lepisosteus_oculatus
ENSNLEG00000006351	VARS	100	93.038	ENSLAFG00000023090	VARS	100	92.642	Loxodonta_africana
ENSNLEG00000006351	VARS	100	98.180	ENSMFAG00000001032	VARS	100	98.180	Macaca_fascicularis
ENSNLEG00000006351	VARS	100	98.180	ENSMMUG00000006828	VARS	100	98.180	Macaca_mulatta
ENSNLEG00000006351	VARS	100	98.339	ENSMNEG00000042072	VARS	100	98.339	Macaca_nemestrina
ENSNLEG00000006351	VARS	100	97.943	ENSMLEG00000039307	VARS	100	97.943	Mandrillus_leucophaeus
ENSNLEG00000006351	VARS	100	64.646	ENSMAMG00000003949	vars	100	64.821	Mastacembelus_armatus
ENSNLEG00000006351	VARS	100	64.961	ENSMZEG00005018327	vars	100	64.325	Maylandia_zebra
ENSNLEG00000006351	VARS	100	92.009	ENSMAUG00000006715	Vars	100	92.009	Mesocricetus_auratus
ENSNLEG00000006351	VARS	100	94.858	ENSMICG00000003548	VARS	100	95.522	Microcebus_murinus
ENSNLEG00000006351	VARS	100	89.557	ENSMOCG00000015404	Vars	100	89.399	Microtus_ochrogaster
ENSNLEG00000006351	VARS	100	64.286	ENSMMOG00000015801	vars	100	64.286	Mola_mola
ENSNLEG00000006351	VARS	100	86.392	ENSMODG00000015204	-	100	86.392	Monodelphis_domestica
ENSNLEG00000006351	VARS	84	58.523	ENSMODG00000001325	-	98	61.988	Monodelphis_domestica
ENSNLEG00000006351	VARS	99	64.595	ENSMALG00000022532	vars	99	64.460	Monopterus_albus
ENSNLEG00000006351	VARS	100	92.722	MGP_CAROLIEiJ_G0021491	Vars	100	92.247	Mus_caroli
ENSNLEG00000006351	VARS	100	92.801	ENSMUSG00000007029	Vars	100	92.326	Mus_musculus
ENSNLEG00000006351	VARS	100	92.089	MGP_PahariEiJ_G0020486	Vars	100	91.693	Mus_pahari
ENSNLEG00000006351	VARS	100	92.801	MGP_SPRETEiJ_G0022396	Vars	100	92.326	Mus_spretus
ENSNLEG00000006351	VARS	100	94.383	ENSMPUG00000010821	VARS	100	94.383	Mustela_putorius_furo
ENSNLEG00000006351	VARS	78	92.206	ENSMLUG00000013126	VARS	100	92.814	Myotis_lucifugus
ENSNLEG00000006351	VARS	100	91.772	ENSNGAG00000012151	Vars	100	92.089	Nannospalax_galili
ENSNLEG00000006351	VARS	100	64.651	ENSNBRG00000020520	vars	100	64.413	Neolamprologus_brichardi
ENSNLEG00000006351	VARS	100	82.753	ENSMEUG00000011378	VARS	100	82.753	Notamacropus_eugenii
ENSNLEG00000006351	VARS	100	93.117	ENSOPRG00000003607	VARS	100	93.117	Ochotona_princeps
ENSNLEG00000006351	VARS	100	90.823	ENSODEG00000017681	VARS	100	90.269	Octodon_degus
ENSNLEG00000006351	VARS	100	65.285	ENSONIG00000013064	vars	99	68.000	Oreochromis_niloticus
ENSNLEG00000006351	VARS	77	79.097	ENSOANG00000005400	VARS	98	78.266	Ornithorhynchus_anatinus
ENSNLEG00000006351	VARS	100	91.483	ENSOCUG00000022463	VARS	100	91.640	Oryctolagus_cuniculus
ENSNLEG00000006351	VARS	100	64.297	ENSORLG00000013063	vars	100	64.313	Oryzias_latipes
ENSNLEG00000006351	VARS	100	64.842	ENSORLG00020003504	vars	100	64.842	Oryzias_latipes_hni
ENSNLEG00000006351	VARS	100	64.738	ENSORLG00015009001	vars	100	64.738	Oryzias_latipes_hsok
ENSNLEG00000006351	VARS	100	64.946	ENSOMEG00000015016	vars	100	64.869	Oryzias_melastigma
ENSNLEG00000006351	VARS	100	94.858	ENSOGAG00000007515	VARS	100	94.858	Otolemur_garnettii
ENSNLEG00000006351	VARS	100	98.813	ENSPPAG00000034012	VARS	100	98.813	Pan_paniscus
ENSNLEG00000006351	VARS	100	94.462	ENSPPRG00000014855	VARS	100	94.462	Panthera_pardus
ENSNLEG00000006351	VARS	85	94.424	ENSPTIG00000010462	VARS	95	94.495	Panthera_tigris_altaica
ENSNLEG00000006351	VARS	100	98.734	ENSPTRG00000017985	VARS	100	98.734	Pan_troglodytes
ENSNLEG00000006351	VARS	100	96.372	ENSPANG00000014565	VARS	100	96.372	Papio_anubis
ENSNLEG00000006351	VARS	100	64.015	ENSPKIG00000016304	vars	100	64.015	Paramormyrops_kingsleyae
ENSNLEG00000006351	VARS	100	65.642	ENSPMGG00000023909	vars	100	65.485	Periophthalmus_magnuspinnatus
ENSNLEG00000006351	VARS	100	93.117	ENSPEMG00000006639	Vars	100	93.117	Peromyscus_maniculatus_bairdii
ENSNLEG00000006351	VARS	100	85.839	ENSPCIG00000018553	VARS	100	85.839	Phascolarctos_cinereus
ENSNLEG00000006351	VARS	100	65.681	ENSPFOG00000015690	vars	100	65.681	Poecilia_formosa
ENSNLEG00000006351	VARS	100	66.247	ENSPLAG00000009590	vars	100	65.932	Poecilia_latipinna
ENSNLEG00000006351	VARS	100	65.681	ENSPMEG00000004708	vars	100	65.681	Poecilia_mexicana
ENSNLEG00000006351	VARS	100	64.044	ENSPREG00000013264	vars	100	63.715	Poecilia_reticulata
ENSNLEG00000006351	VARS	100	96.915	ENSPPYG00000016460	VARS	100	96.915	Pongo_abelii
ENSNLEG00000006351	VARS	100	87.379	ENSPCAG00000013565	VARS	86	92.101	Procavia_capensis
ENSNLEG00000006351	VARS	100	94.704	ENSPCOG00000010942	VARS	100	95.178	Propithecus_coquereli
ENSNLEG00000006351	VARS	100	90.902	ENSPVAG00000012403	VARS	100	90.902	Pteropus_vampyrus
ENSNLEG00000006351	VARS	100	64.884	ENSPNYG00000022511	vars	100	64.646	Pundamilia_nyererei
ENSNLEG00000006351	VARS	100	64.624	ENSPNAG00000020962	vars	100	64.391	Pygocentrus_nattereri
ENSNLEG00000006351	VARS	100	93.038	ENSRNOG00000000867	Vars	100	93.038	Rattus_norvegicus
ENSNLEG00000006351	VARS	100	98.180	ENSRBIG00000041669	VARS	100	98.180	Rhinopithecus_bieti
ENSNLEG00000006351	VARS	100	98.180	ENSRROG00000045490	VARS	100	98.180	Rhinopithecus_roxellana
ENSNLEG00000006351	VARS	100	96.835	ENSSBOG00000035402	VARS	100	96.835	Saimiri_boliviensis_boliviensis
ENSNLEG00000006351	VARS	100	81.383	ENSSHAG00000006937	VARS	100	81.618	Sarcophilus_harrisii
ENSNLEG00000006351	VARS	100	64.402	ENSSFOG00015014272	vars	98	71.733	Scleropages_formosus
ENSNLEG00000006351	VARS	100	63.777	ENSSMAG00000009596	vars	99	63.615	Scophthalmus_maximus
ENSNLEG00000006351	VARS	100	64.628	ENSSDUG00000014177	vars	100	64.391	Seriola_dumerili
ENSNLEG00000006351	VARS	100	64.628	ENSSLDG00000025316	vars	100	64.391	Seriola_lalandi_dorsalis
ENSNLEG00000006351	VARS	100	64.802	ENSSPAG00000017068	vars	100	64.875	Stegastes_partitus
ENSNLEG00000006351	VARS	100	92.411	ENSSSCG00000038950	VARS	100	92.885	Sus_scrofa
ENSNLEG00000006351	VARS	82	64.142	ENSTRUG00000012307	vars	98	64.183	Takifugu_rubripes
ENSNLEG00000006351	VARS	85	51.170	ENSTRUG00000002238	-	99	52.493	Takifugu_rubripes
ENSNLEG00000006351	VARS	100	64.973	ENSTNIG00000008011	vars	100	64.812	Tetraodon_nigroviridis
ENSNLEG00000006351	VARS	54	95.880	ENSTBEG00000004728	-	60	95.880	Tupaia_belangeri
ENSNLEG00000006351	VARS	100	89.078	ENSTTRG00000014128	VARS	100	85.680	Tursiops_truncatus
ENSNLEG00000006351	VARS	100	90.802	ENSUAMG00000010424	VARS	100	90.802	Ursus_americanus
ENSNLEG00000006351	VARS	93	93.810	ENSUMAG00000013486	VARS	98	93.333	Ursus_maritimus
ENSNLEG00000006351	VARS	100	93.518	ENSVVUG00000021323	VARS	100	93.281	Vulpes_vulpes
ENSNLEG00000006351	VARS	96	62.813	ENSXETG00000024076	vars	98	61.974	Xenopus_tropicalis
ENSNLEG00000006351	VARS	100	65.591	ENSXCOG00000019172	vars	100	65.591	Xiphophorus_couchianus
ENSNLEG00000006351	VARS	100	65.525	ENSXMAG00000010927	vars	100	65.525	Xiphophorus_maculatus