EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000006496 (Gene tree)
Gene ID: 100586306
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 161272 bases
Position: chr13:23270549-23431820
Accession: 100586306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000007924	ResIII	PF04851.15	9.9e-08	1	1
ENSNLEP00000046744	ResIII	PF04851.15	9.9e-08	1	1
ENSNLEP00000037353	ResIII	PF04851.15	1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000059266	CHD6-201	1119	-	ENSNLEP00000044383	372 (aa)	-	A0A2I3HL53
ENSNLET00000044533	CHD6-202	8091	-	ENSNLEP00000046744	2696 (aa)	-	A0A2I3HT21
ENSNLET00000008306	CHD6-204	8019	XM_003253583	ENSNLEP00000007924	2672 (aa)	XP_003253631	G1R402
ENSNLET00000048928	CHD6-205	1413	-	ENSNLEP00000030534	470 (aa)	-	A0A2I3GGV8
ENSNLET00000042220	CHD6-203	8058	-	ENSNLEP00000037353	2685 (aa)	-	A0A2I3H137

Gene Model

Click here to download ENSNLEG00000006496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000006496's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000006496	CHD6	62	60.236	ENSNLEG00000014445	CHD8	68	62.500
ENSNLEG00000006496	CHD6	71	62.194	ENSNLEG00000001026	CHD9	70	62.232
ENSNLEG00000006496	CHD6	73	68.052	ENSNLEG00000002027	CHD7	71	64.826

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000006496	CHD6	99	97.153	ENSG00000124177	CHD6	99	99.561	Homo_sapiens
ENSNLEG00000006496	CHD6	77	70.375	ENSAPOG00000013736	chd6	65	71.875	Acanthochromis_polyacanthus
ENSNLEG00000006496	CHD6	100	89.938	ENSAMEG00000009496	CHD6	100	89.827	Ailuropoda_melanoleuca
ENSNLEG00000006496	CHD6	74	74.402	ENSATEG00000005608	chd6	62	76.017	Anabas_testudineus
ENSNLEG00000006496	CHD6	99	70.337	ENSAPLG00000015592	CHD6	99	71.235	Anas_platyrhynchos
ENSNLEG00000006496	CHD6	94	73.220	ENSACAG00000006842	CHD6	95	74.388	Anolis_carolinensis
ENSNLEG00000006496	CHD6	99	95.381	ENSANAG00000037548	CHD6	100	94.960	Aotus_nancymaae
ENSNLEG00000006496	CHD6	77	72.490	ENSAMXG00000009576	chd6	77	68.926	Astyanax_mexicanus
ENSNLEG00000006496	CHD6	100	86.610	ENSBTAG00000005733	CHD6	100	86.647	Bos_taurus
ENSNLEG00000006496	CHD6	99	95.436	ENSCJAG00000017920	CHD6	100	94.884	Callithrix_jacchus
ENSNLEG00000006496	CHD6	100	90.118	ENSCAFG00000009236	CHD6	100	90.007	Canis_familiaris
ENSNLEG00000006496	CHD6	99	90.620	ENSCAFG00020012906	CHD6	99	95.271	Canis_lupus_dingo
ENSNLEG00000006496	CHD6	100	86.794	ENSCHIG00000017606	CHD6	100	86.794	Capra_hircus
ENSNLEG00000006496	CHD6	84	92.584	ENSTSYG00000014635	CHD6	100	92.584	Carlito_syrichta
ENSNLEG00000006496	CHD6	99	90.074	ENSCPOG00000015641	CHD6	100	89.680	Cavia_porcellus
ENSNLEG00000006496	CHD6	99	95.728	ENSCCAG00000036828	CHD6	100	95.728	Cebus_capucinus
ENSNLEG00000006496	CHD6	100	96.513	ENSCATG00000039248	CHD6	100	96.513	Cercocebus_atys
ENSNLEG00000006496	CHD6	99	89.912	ENSCLAG00000013743	CHD6	100	89.593	Chinchilla_lanigera
ENSNLEG00000006496	CHD6	99	96.673	ENSCSAG00000013997	CHD6	99	96.673	Chlorocebus_sabaeus
ENSNLEG00000006496	CHD6	91	89.211	ENSCHOG00000012647	CHD6	95	89.013	Choloepus_hoffmanni
ENSNLEG00000006496	CHD6	99	71.851	ENSCPBG00000019382	CHD6	99	72.385	Chrysemys_picta_bellii
ENSNLEG00000006496	CHD6	99	96.809	ENSCANG00000043435	CHD6	99	96.809	Colobus_angolensis_palliatus
ENSNLEG00000006496	CHD6	99	88.224	ENSCGRG00001002694	Chd6	100	88.060	Cricetulus_griseus_chok1gshd
ENSNLEG00000006496	CHD6	82	72.595	ENSDARG00000017244	chd6	79	72.755	Danio_rerio
ENSNLEG00000006496	CHD6	99	89.392	ENSDNOG00000004176	CHD6	99	89.439	Dasypus_novemcinctus
ENSNLEG00000006496	CHD6	99	91.729	ENSEASG00005023433	CHD6	99	91.729	Equus_asinus_asinus
ENSNLEG00000006496	CHD6	99	91.402	ENSECAG00000011761	CHD6	99	91.390	Equus_caballus
ENSNLEG00000006496	CHD6	72	78.058	ENSELUG00000012309	chd6	92	78.846	Esox_lucius
ENSNLEG00000006496	CHD6	100	90.048	ENSFCAG00000003572	CHD6	100	89.974	Felis_catus
ENSNLEG00000006496	CHD6	99	69.264	ENSFALG00000012563	CHD6	98	69.311	Ficedula_albicollis
ENSNLEG00000006496	CHD6	99	90.480	ENSFDAG00000013791	CHD6	99	90.540	Fukomys_damarensis
ENSNLEG00000006496	CHD6	73	68.908	ENSGMOG00000011715	chd6	85	68.948	Gadus_morhua
ENSNLEG00000006496	CHD6	78	68.758	ENSGACG00000000037	chd6	86	68.093	Gasterosteus_aculeatus
ENSNLEG00000006496	CHD6	99	97.366	ENSGGOG00000013123	CHD6	99	97.366	Gorilla_gorilla
ENSNLEG00000006496	CHD6	77	71.213	ENSHBUG00000014701	chd6	65	72.204	Haplochromis_burtoni
ENSNLEG00000006496	CHD6	99	90.483	ENSHGLG00000004548	CHD6	100	90.125	Heterocephalus_glaber_female
ENSNLEG00000006496	CHD6	99	90.483	ENSHGLG00100006401	CHD6	100	90.125	Heterocephalus_glaber_male
ENSNLEG00000006496	CHD6	76	76.538	ENSIPUG00000003692	chd6	73	76.845	Ictalurus_punctatus
ENSNLEG00000006496	CHD6	99	91.070	ENSSTOG00000013382	CHD6	100	90.746	Ictidomys_tridecemlineatus
ENSNLEG00000006496	CHD6	85	75.767	ENSLACG00000010881	CHD6	85	75.708	Latimeria_chalumnae
ENSNLEG00000006496	CHD6	72	78.926	ENSLOCG00000007386	chd6	84	74.300	Lepisosteus_oculatus
ENSNLEG00000006496	CHD6	100	90.272	ENSLAFG00000012144	CHD6	100	90.235	Loxodonta_africana
ENSNLEG00000006496	CHD6	100	96.788	ENSMFAG00000032830	CHD6	100	96.788	Macaca_fascicularis
ENSNLEG00000006496	CHD6	99	96.710	ENSMMUG00000020458	CHD6	99	96.710	Macaca_mulatta
ENSNLEG00000006496	CHD6	100	96.715	ENSMNEG00000040847	CHD6	100	96.715	Macaca_nemestrina
ENSNLEG00000006496	CHD6	100	96.788	ENSMLEG00000031965	CHD6	100	96.788	Mandrillus_leucophaeus
ENSNLEG00000006496	CHD6	74	72.297	ENSMAMG00000013111	chd6	62	75.793	Mastacembelus_armatus
ENSNLEG00000006496	CHD6	99	69.934	ENSMGAG00000001121	CHD6	99	70.760	Meleagris_gallopavo
ENSNLEG00000006496	CHD6	100	92.458	ENSMICG00000016641	CHD6	99	92.743	Microcebus_murinus
ENSNLEG00000006496	CHD6	89	79.926	ENSMODG00000000720	-	99	80.050	Monodelphis_domestica
ENSNLEG00000006496	CHD6	99	87.038	MGP_CAROLIEiJ_G0024604	Chd6	100	92.249	Mus_caroli
ENSNLEG00000006496	CHD6	99	87.186	ENSMUSG00000057133	Chd6	100	92.165	Mus_musculus
ENSNLEG00000006496	CHD6	99	87.001	MGP_PahariEiJ_G0026048	Chd6	100	92.586	Mus_pahari
ENSNLEG00000006496	CHD6	99	87.223	MGP_SPRETEiJ_G0025526	Chd6	100	92.249	Mus_spretus
ENSNLEG00000006496	CHD6	100	88.388	ENSMPUG00000017695	CHD6	100	88.462	Mustela_putorius_furo
ENSNLEG00000006496	CHD6	100	89.497	ENSMLUG00000016247	CHD6	100	89.423	Myotis_lucifugus
ENSNLEG00000006496	CHD6	78	72.495	ENSNBRG00000013839	chd6	79	72.536	Neolamprologus_brichardi
ENSNLEG00000006496	CHD6	99	86.052	ENSOPRG00000013376	-	100	85.714	Ochotona_princeps
ENSNLEG00000006496	CHD6	85	72.802	ENSONIG00000000393	chd6	88	72.264	Oreochromis_niloticus
ENSNLEG00000006496	CHD6	99	69.354	ENSOANG00000014347	CHD6	99	69.587	Ornithorhynchus_anatinus
ENSNLEG00000006496	CHD6	99	88.413	ENSOCUG00000012394	CHD6	99	88.396	Oryctolagus_cuniculus
ENSNLEG00000006496	CHD6	80	69.456	ENSORLG00020021891	chd6	95	83.166	Oryzias_latipes_hni
ENSNLEG00000006496	CHD6	99	90.593	ENSOGAG00000002427	CHD6	99	90.596	Otolemur_garnettii
ENSNLEG00000006496	CHD6	99	84.740	ENSOARG00000002597	CHD6	99	84.865	Ovis_aries
ENSNLEG00000006496	CHD6	100	90.048	ENSPPRG00000014756	CHD6	100	90.121	Panthera_pardus
ENSNLEG00000006496	CHD6	100	89.938	ENSPTIG00000011094	CHD6	100	90.011	Panthera_tigris_altaica
ENSNLEG00000006496	CHD6	99	97.218	ENSPTRG00000013504	CHD6	99	97.218	Pan_troglodytes
ENSNLEG00000006496	CHD6	100	96.884	ENSPANG00000025554	CHD6	100	96.884	Papio_anubis
ENSNLEG00000006496	CHD6	77	75.116	ENSPKIG00000005578	chd6	79	72.032	Paramormyrops_kingsleyae
ENSNLEG00000006496	CHD6	77	75.683	ENSPMGG00000014877	chd6	83	75.447	Periophthalmus_magnuspinnatus
ENSNLEG00000006496	CHD6	100	78.723	ENSPCIG00000028037	CHD6	100	79.237	Phascolarctos_cinereus
ENSNLEG00000006496	CHD6	79	72.373	ENSPLAG00000003128	chd6	68	71.676	Poecilia_latipinna
ENSNLEG00000006496	CHD6	74	75.097	ENSPREG00000022653	chd6	99	83.333	Poecilia_reticulata
ENSNLEG00000006496	CHD6	99	97.339	ENSPPYG00000011016	CHD6	99	97.339	Pongo_abelii
ENSNLEG00000006496	CHD6	99	92.191	ENSPCOG00000001089	CHD6	99	91.786	Propithecus_coquereli
ENSNLEG00000006496	CHD6	78	73.715	ENSPNYG00000022516	chd6	78	73.005	Pundamilia_nyererei
ENSNLEG00000006496	CHD6	81	69.964	ENSPNAG00000012825	chd6	79	70.157	Pygocentrus_nattereri
ENSNLEG00000006496	CHD6	99	87.112	ENSRNOG00000016744	Chd6	100	86.218	Rattus_norvegicus
ENSNLEG00000006496	CHD6	99	95.505	ENSSBOG00000022089	CHD6	100	95.505	Saimiri_boliviensis_boliviensis
ENSNLEG00000006496	CHD6	99	78.684	ENSSHAG00000017072	CHD6	99	79.396	Sarcophilus_harrisii
ENSNLEG00000006496	CHD6	78	76.172	ENSSFOG00015012920	chd6	81	73.025	Scleropages_formosus
ENSNLEG00000006496	CHD6	59	99.342	ENSSARG00000002615	-	61	99.342	Sorex_araneus
ENSNLEG00000006496	CHD6	100	88.987	ENSSSCG00000007360	CHD6	100	90.134	Sus_scrofa
ENSNLEG00000006496	CHD6	83	76.017	ENSTNIG00000017487	chd6	88	74.290	Tetraodon_nigroviridis
ENSNLEG00000006496	CHD6	100	86.574	ENSTTRG00000013438	CHD6	100	86.464	Tursiops_truncatus
ENSNLEG00000006496	CHD6	99	89.225	ENSUAMG00000024036	CHD6	99	89.213	Ursus_americanus
ENSNLEG00000006496	CHD6	99	90.587	ENSUMAG00000002017	CHD6	99	90.576	Ursus_maritimus
ENSNLEG00000006496	CHD6	94	87.355	ENSVPAG00000007941	CHD6	95	87.286	Vicugna_pacos
ENSNLEG00000006496	CHD6	100	90.158	ENSVVUG00000029164	CHD6	100	90.048	Vulpes_vulpes
ENSNLEG00000006496	CHD6	82	71.942	ENSXETG00000021445	chd6	89	68.335	Xenopus_tropicalis