EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000006524 (Gene tree)
Gene ID: 100587770
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 5755 bases
Position: chr13:21338168-21343922
Accession: 100587770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000007938	RRM_1	PF00076.22	1.4e-32	1	2
ENSNLEP00000007938	RRM_1	PF00076.22	1.4e-32	2	2
ENSNLEP00000040040	RRM_1	PF00076.22	3.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000039973	SRSF6-202	408	-	ENSNLEP00000040040	135 (aa)	-	A0A2I3H960
ENSNLET00000008321	SRSF6-201	3767	XM_003253584	ENSNLEP00000007938	344 (aa)	XP_003253632	G1R416

Gene Model

Click here to download ENSNLEG00000006524's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03040	Spliceosome	KEGG
nle05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000006524's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000006524	SRSF6	51	47.297	ENSNLEG00000015661	SRSF9	71	41.143
ENSNLEG00000006524	SRSF6	94	67.385	ENSNLEG00000030787	-	64	82.888
ENSNLEG00000006524	SRSF6	75	37.736	ENSNLEG00000033316	-	85	37.736
ENSNLEG00000006524	SRSF6	62	32.143	ENSNLEG00000035021	RBM4	59	32.143
ENSNLEG00000006524	SRSF6	57	39.744	ENSNLEG00000034042	-	86	39.474
ENSNLEG00000006524	SRSF6	50	71.642	ENSNLEG00000001615	SRSF5	86	62.295
ENSNLEG00000006524	SRSF6	58	40.670	ENSNLEG00000008088	-	77	50.000
ENSNLEG00000006524	SRSF6	56	46.835	ENSNLEG00000010737	SRSF3	72	41.176
ENSNLEG00000006524	SRSF6	56	48.101	ENSNLEG00000016349	SRSF7	58	48.101
ENSNLEG00000006524	SRSF6	61	34.066	ENSNLEG00000028393	-	54	33.766
ENSNLEG00000006524	SRSF6	62	32.143	ENSNLEG00000006213	RBM4B	57	32.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000006524	SRSF6	100	100.000	ENSG00000124193	SRSF6	100	100.000	Homo_sapiens
ENSNLEG00000006524	SRSF6	58	93.590	ENSAPOG00000016635	-	84	82.353	Acanthochromis_polyacanthus
ENSNLEG00000006524	SRSF6	94	85.846	ENSAMEG00000003710	SRSF6	94	85.583	Ailuropoda_melanoleuca
ENSNLEG00000006524	SRSF6	86	68.581	ENSACIG00000023658	-	56	87.778	Amphilophus_citrinellus
ENSNLEG00000006524	SRSF6	97	60.290	ENSACIG00000020091	-	95	80.315	Amphilophus_citrinellus
ENSNLEG00000006524	SRSF6	92	67.939	ENSAOCG00000019438	-	98	67.939	Amphiprion_ocellaris
ENSNLEG00000006524	SRSF6	65	82.955	ENSAOCG00000004309	-	57	83.152	Amphiprion_ocellaris
ENSNLEG00000006524	SRSF6	98	61.871	ENSAPEG00000013086	-	53	88.172	Amphiprion_percula
ENSNLEG00000006524	SRSF6	63	84.706	ENSAPEG00000020746	-	66	79.787	Amphiprion_percula
ENSNLEG00000006524	SRSF6	66	83.146	ENSATEG00000007255	-	71	80.000	Anabas_testudineus
ENSNLEG00000006524	SRSF6	94	82.407	ENSACAG00000002061	SRSF6	93	84.923	Anolis_carolinensis
ENSNLEG00000006524	SRSF6	100	100.000	ENSANAG00000024080	SRSF6	100	100.000	Aotus_nancymaae
ENSNLEG00000006524	SRSF6	54	89.041	ENSACLG00000024373	-	96	79.570	Astatotilapia_calliptera
ENSNLEG00000006524	SRSF6	55	93.243	ENSAMXG00000003101	-	78	64.505	Astyanax_mexicanus
ENSNLEG00000006524	SRSF6	55	91.892	ENSAMXG00000042692	-	96	78.519	Astyanax_mexicanus
ENSNLEG00000006524	SRSF6	100	99.259	ENSBTAG00000008527	SRSF6	100	99.259	Bos_taurus
ENSNLEG00000006524	SRSF6	100	100.000	ENSCJAG00000048403	SRSF6	100	100.000	Callithrix_jacchus
ENSNLEG00000006524	SRSF6	100	99.259	ENSCAFG00000009289	SRSF6	100	99.259	Canis_familiaris
ENSNLEG00000006524	SRSF6	100	99.259	ENSCAFG00020013559	SRSF6	100	99.259	Canis_lupus_dingo
ENSNLEG00000006524	SRSF6	100	99.259	ENSCHIG00000015890	-	100	99.259	Capra_hircus
ENSNLEG00000006524	SRSF6	100	97.110	ENSCHIG00000009148	-	100	97.110	Capra_hircus
ENSNLEG00000006524	SRSF6	100	82.948	ENSTSYG00000026476	SRSF6	100	82.948	Carlito_syrichta
ENSNLEG00000006524	SRSF6	100	100.000	ENSCPOG00000011761	SRSF6	100	100.000	Cavia_porcellus
ENSNLEG00000006524	SRSF6	94	71.914	ENSCCAG00000018540	-	62	87.766	Cebus_capucinus
ENSNLEG00000006524	SRSF6	100	100.000	ENSCCAG00000026018	-	100	100.000	Cebus_capucinus
ENSNLEG00000006524	SRSF6	100	100.000	ENSCATG00000030794	SRSF6	100	100.000	Cercocebus_atys
ENSNLEG00000006524	SRSF6	100	100.000	ENSCLAG00000010247	SRSF6	100	100.000	Chinchilla_lanigera
ENSNLEG00000006524	SRSF6	100	99.419	ENSCSAG00000014022	SRSF6	100	99.419	Chlorocebus_sabaeus
ENSNLEG00000006524	SRSF6	100	83.237	ENSCHOG00000000561	SRSF6	77	100.000	Choloepus_hoffmanni
ENSNLEG00000006524	SRSF6	58	97.436	ENSCPBG00000018200	SRSF6	94	85.061	Chrysemys_picta_bellii
ENSNLEG00000006524	SRSF6	100	99.128	ENSCANG00000037774	-	100	99.128	Colobus_angolensis_palliatus
ENSNLEG00000006524	SRSF6	100	84.884	ENSCANG00000042529	-	100	84.884	Colobus_angolensis_palliatus
ENSNLEG00000006524	SRSF6	100	98.519	ENSCGRG00001022339	Srsf6	100	98.519	Cricetulus_griseus_chok1gshd
ENSNLEG00000006524	SRSF6	63	95.814	ENSCGRG00000006618	Srsf6	100	95.814	Cricetulus_griseus_crigri
ENSNLEG00000006524	SRSF6	58	93.590	ENSCSEG00000019778	SRSF6	90	84.252	Cynoglossus_semilaevis
ENSNLEG00000006524	SRSF6	58	92.308	ENSCVAG00000001863	SRSF6	95	85.039	Cyprinodon_variegatus
ENSNLEG00000006524	SRSF6	55	90.541	ENSDARG00000016783	srsf6b	87	89.157	Danio_rerio
ENSNLEG00000006524	SRSF6	94	95.988	ENSDNOG00000008410	SRSF6	94	95.988	Dasypus_novemcinctus
ENSNLEG00000006524	SRSF6	100	100.000	ENSDORG00000028378	Srsf6	100	100.000	Dipodomys_ordii
ENSNLEG00000006524	SRSF6	92	92.812	ENSETEG00000006221	SRSF6	94	90.154	Echinops_telfairi
ENSNLEG00000006524	SRSF6	100	96.821	ENSEASG00005023429	SRSF6	100	96.821	Equus_asinus_asinus
ENSNLEG00000006524	SRSF6	100	96.821	ENSECAG00000023932	SRSF6	100	96.821	Equus_caballus
ENSNLEG00000006524	SRSF6	56	93.846	ENSEEUG00000002324	SRSF6	90	93.939	Erinaceus_europaeus
ENSNLEG00000006524	SRSF6	73	77.778	ENSELUG00000013506	SRSF6	88	77.778	Esox_lucius
ENSNLEG00000006524	SRSF6	98	59.286	ENSELUG00000024182	SRSF6	85	87.356	Esox_lucius
ENSNLEG00000006524	SRSF6	100	97.399	ENSFCAG00000032814	SRSF6	100	97.399	Felis_catus
ENSNLEG00000006524	SRSF6	94	81.790	ENSFDAG00000012191	SRSF6	94	78.769	Fukomys_damarensis
ENSNLEG00000006524	SRSF6	87	71.148	ENSFHEG00000023065	srsf6a	55	87.500	Fundulus_heteroclitus
ENSNLEG00000006524	SRSF6	56	90.789	ENSGMOG00000014458	srsf6a	52	78.646	Gadus_morhua
ENSNLEG00000006524	SRSF6	61	76.829	ENSGMOG00000006105	srsf6a	62	70.391	Gadus_morhua
ENSNLEG00000006524	SRSF6	100	97.037	ENSGALG00000000990	SRSF6	100	97.037	Gallus_gallus
ENSNLEG00000006524	SRSF6	58	92.308	ENSGAFG00000019088	-	72	82.400	Gambusia_affinis
ENSNLEG00000006524	SRSF6	98	61.194	ENSGACG00000006084	srsf6a	53	83.871	Gasterosteus_aculeatus
ENSNLEG00000006524	SRSF6	58	97.436	ENSGAGG00000003238	SRSF6	94	85.061	Gopherus_agassizii
ENSNLEG00000006524	SRSF6	100	100.000	ENSGGOG00000009808	SRSF6	100	100.000	Gorilla_gorilla
ENSNLEG00000006524	SRSF6	56	89.474	ENSHBUG00000006386	-	58	83.696	Haplochromis_burtoni
ENSNLEG00000006524	SRSF6	90	76.038	ENSHGLG00000007701	-	58	79.144	Heterocephalus_glaber_female
ENSNLEG00000006524	SRSF6	100	100.000	ENSHGLG00000007348	SRSF6	100	100.000	Heterocephalus_glaber_female
ENSNLEG00000006524	SRSF6	94	82.099	ENSHGLG00100005043	SRSF6	94	79.077	Heterocephalus_glaber_male
ENSNLEG00000006524	SRSF6	58	89.744	ENSHCOG00000002740	srsf6a	57	83.152	Hippocampus_comes
ENSNLEG00000006524	SRSF6	58	92.308	ENSIPUG00000004776	-	72	72.103	Ictalurus_punctatus
ENSNLEG00000006524	SRSF6	100	100.000	ENSSTOG00000010866	SRSF6	100	100.000	Ictidomys_tridecemlineatus
ENSNLEG00000006524	SRSF6	56	96.335	ENSJJAG00000020690	Srsf6	91	96.373	Jaculus_jaculus
ENSNLEG00000006524	SRSF6	54	93.151	ENSKMAG00000011934	srsf6a	59	85.870	Kryptolebias_marmoratus
ENSNLEG00000006524	SRSF6	58	92.308	ENSLBEG00000007356	srsf6a	52	85.484	Labrus_bergylta
ENSNLEG00000006524	SRSF6	89	82.903	ENSLACG00000005466	SRSF6	54	91.848	Latimeria_chalumnae
ENSNLEG00000006524	SRSF6	69	95.816	ENSLAFG00000006682	SRSF6	89	95.652	Loxodonta_africana
ENSNLEG00000006524	SRSF6	100	100.000	ENSMFAG00000036925	SRSF6	100	100.000	Macaca_fascicularis
ENSNLEG00000006524	SRSF6	100	100.000	ENSMMUG00000006742	SRSF6	100	100.000	Macaca_mulatta
ENSNLEG00000006524	SRSF6	100	97.965	ENSMNEG00000038270	-	100	97.965	Macaca_nemestrina
ENSNLEG00000006524	SRSF6	100	98.837	ENSMNEG00000027392	-	100	98.837	Macaca_nemestrina
ENSNLEG00000006524	SRSF6	63	99.070	ENSMLEG00000031524	SRSF6	100	99.070	Mandrillus_leucophaeus
ENSNLEG00000006524	SRSF6	63	87.059	ENSMAMG00000023477	-	89	87.059	Mastacembelus_armatus
ENSNLEG00000006524	SRSF6	98	61.871	ENSMAMG00000017161	srsf6a	53	87.634	Mastacembelus_armatus
ENSNLEG00000006524	SRSF6	98	58.333	ENSMZEG00005020658	-	60	82.873	Maylandia_zebra
ENSNLEG00000006524	SRSF6	56	89.474	ENSMZEG00005008032	-	57	83.696	Maylandia_zebra
ENSNLEG00000006524	SRSF6	100	98.519	ENSMAUG00000019086	-	100	98.519	Mesocricetus_auratus
ENSNLEG00000006524	SRSF6	100	100.000	ENSMICG00000008537	SRSF6	100	100.000	Microcebus_murinus
ENSNLEG00000006524	SRSF6	63	95.814	ENSMOCG00000018738	Srsf6	100	95.814	Microtus_ochrogaster
ENSNLEG00000006524	SRSF6	58	92.308	ENSMMOG00000015241	-	78	90.361	Mola_mola
ENSNLEG00000006524	SRSF6	58	97.436	ENSMODG00000003107	SRSF6	95	91.104	Monodelphis_domestica
ENSNLEG00000006524	SRSF6	100	98.519	MGP_CAROLIEiJ_G0024606	Srsf6	100	98.519	Mus_caroli
ENSNLEG00000006524	SRSF6	100	98.519	ENSMUSG00000016921	Srsf6	100	98.519	Mus_musculus
ENSNLEG00000006524	SRSF6	100	98.519	MGP_PahariEiJ_G0026050	Srsf6	100	98.519	Mus_pahari
ENSNLEG00000006524	SRSF6	100	98.519	MGP_SPRETEiJ_G0025528	Srsf6	100	98.519	Mus_spretus
ENSNLEG00000006524	SRSF6	83	97.569	ENSMPUG00000017692	SRSF6	99	97.569	Mustela_putorius_furo
ENSNLEG00000006524	SRSF6	93	80.745	ENSMLUG00000016618	SRSF6	94	80.615	Myotis_lucifugus
ENSNLEG00000006524	SRSF6	100	100.000	ENSNGAG00000017560	Srsf6	100	100.000	Nannospalax_galili
ENSNLEG00000006524	SRSF6	58	93.590	ENSNBRG00000001846	-	52	87.634	Neolamprologus_brichardi
ENSNLEG00000006524	SRSF6	56	89.474	ENSNBRG00000014709	-	58	83.696	Neolamprologus_brichardi
ENSNLEG00000006524	SRSF6	58	97.436	ENSMEUG00000014615	SRSF6	99	92.787	Notamacropus_eugenii
ENSNLEG00000006524	SRSF6	75	96.923	ENSOPRG00000002017	-	100	96.923	Ochotona_princeps
ENSNLEG00000006524	SRSF6	100	100.000	ENSODEG00000016510	-	100	100.000	Octodon_degus
ENSNLEG00000006524	SRSF6	61	86.585	ENSONIG00000020247	-	53	84.239	Oreochromis_niloticus
ENSNLEG00000006524	SRSF6	74	58.268	ENSOCUG00000023999	-	70	63.687	Oryctolagus_cuniculus
ENSNLEG00000006524	SRSF6	83	80.392	ENSOCUG00000009785	-	98	83.784	Oryctolagus_cuniculus
ENSNLEG00000006524	SRSF6	58	94.872	ENSORLG00020017506	srsf6a	90	70.323	Oryzias_latipes_hni
ENSNLEG00000006524	SRSF6	100	96.532	ENSOGAG00000014468	SRSF6	100	96.532	Otolemur_garnettii
ENSNLEG00000006524	SRSF6	93	93.789	ENSOARG00000003117	SRSF6	94	93.538	Ovis_aries
ENSNLEG00000006524	SRSF6	90	86.084	ENSPPAG00000043131	-	100	88.350	Pan_paniscus
ENSNLEG00000006524	SRSF6	100	99.709	ENSPPAG00000034327	-	100	99.709	Pan_paniscus
ENSNLEG00000006524	SRSF6	100	97.399	ENSPPRG00000008917	SRSF6	100	97.399	Panthera_pardus
ENSNLEG00000006524	SRSF6	63	96.774	ENSPTIG00000019153	SRSF6	100	96.774	Panthera_tigris_altaica
ENSNLEG00000006524	SRSF6	100	100.000	ENSPTRG00000044686	-	100	100.000	Pan_troglodytes
ENSNLEG00000006524	SRSF6	90	86.084	ENSPTRG00000046274	-	100	88.350	Pan_troglodytes
ENSNLEG00000006524	SRSF6	100	100.000	ENSPANG00000035224	SRSF6	100	100.000	Papio_anubis
ENSNLEG00000006524	SRSF6	58	93.590	ENSPKIG00000015603	-	88	84.252	Paramormyrops_kingsleyae
ENSNLEG00000006524	SRSF6	59	77.500	ENSPKIG00000015703	-	95	61.745	Paramormyrops_kingsleyae
ENSNLEG00000006524	SRSF6	100	63.143	ENSPKIG00000018463	-	83	89.286	Paramormyrops_kingsleyae
ENSNLEG00000006524	SRSF6	88	71.753	ENSPMGG00000014963	srsf6a	55	89.130	Periophthalmus_magnuspinnatus
ENSNLEG00000006524	SRSF6	85	87.931	ENSPEMG00000022405	-	96	87.931	Peromyscus_maniculatus_bairdii
ENSNLEG00000006524	SRSF6	100	98.519	ENSPCIG00000003820	SRSF6	100	98.519	Phascolarctos_cinereus
ENSNLEG00000006524	SRSF6	58	92.308	ENSPFOG00000006437	srsf6a	50	83.158	Poecilia_formosa
ENSNLEG00000006524	SRSF6	58	92.308	ENSPLAG00000009243	srsf6a	80	82.677	Poecilia_latipinna
ENSNLEG00000006524	SRSF6	58	92.308	ENSPMEG00000006042	SRSF6	54	87.027	Poecilia_mexicana
ENSNLEG00000006524	SRSF6	59	91.139	ENSPREG00000001040	srsf6a	87	83.846	Poecilia_reticulata
ENSNLEG00000006524	SRSF6	100	100.000	ENSPPYG00000011019	SRSF6	100	100.000	Pongo_abelii
ENSNLEG00000006524	SRSF6	58	98.718	ENSPCAG00000010954	SRSF6	96	93.498	Procavia_capensis
ENSNLEG00000006524	SRSF6	100	100.000	ENSPCOG00000026364	SRSF6	100	100.000	Propithecus_coquereli
ENSNLEG00000006524	SRSF6	94	95.963	ENSPVAG00000015232	SRSF6	94	95.666	Pteropus_vampyrus
ENSNLEG00000006524	SRSF6	58	93.590	ENSPNYG00000011272	-	51	87.634	Pundamilia_nyererei
ENSNLEG00000006524	SRSF6	56	89.474	ENSPNYG00000004944	-	58	83.696	Pundamilia_nyererei
ENSNLEG00000006524	SRSF6	59	95.000	ENSPNAG00000023179	-	94	84.252	Pygocentrus_nattereri
ENSNLEG00000006524	SRSF6	100	96.221	ENSRNOG00000006380	Srsf6	100	96.221	Rattus_norvegicus
ENSNLEG00000006524	SRSF6	100	97.674	ENSRBIG00000041414	SRSF6	100	97.674	Rhinopithecus_bieti
ENSNLEG00000006524	SRSF6	100	100.000	ENSRROG00000029989	SRSF6	100	100.000	Rhinopithecus_roxellana
ENSNLEG00000006524	SRSF6	100	100.000	ENSSBOG00000033708	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSNLEG00000006524	SRSF6	94	87.346	ENSSHAG00000012805	SRSF6	95	90.798	Sarcophilus_harrisii
ENSNLEG00000006524	SRSF6	88	64.286	ENSSFOG00015019681	-	53	81.959	Scleropages_formosus
ENSNLEG00000006524	SRSF6	55	93.243	ENSSFOG00015015169	SRSF6	60	89.130	Scleropages_formosus
ENSNLEG00000006524	SRSF6	59	92.500	ENSSMAG00000014861	-	95	67.969	Scophthalmus_maximus
ENSNLEG00000006524	SRSF6	56	88.158	ENSSMAG00000017447	-	55	79.891	Scophthalmus_maximus
ENSNLEG00000006524	SRSF6	98	61.151	ENSSDUG00000016097	srsf6a	53	87.634	Seriola_dumerili
ENSNLEG00000006524	SRSF6	63	87.059	ENSSDUG00000011036	-	90	87.059	Seriola_dumerili
ENSNLEG00000006524	SRSF6	63	87.059	ENSSLDG00000014858	-	90	87.059	Seriola_lalandi_dorsalis
ENSNLEG00000006524	SRSF6	98	61.871	ENSSLDG00000022841	srsf6a	54	87.634	Seriola_lalandi_dorsalis
ENSNLEG00000006524	SRSF6	75	95.769	ENSSARG00000001602	SRSF6	100	95.769	Sorex_araneus
ENSNLEG00000006524	SRSF6	100	97.037	ENSSPUG00000004967	SRSF6	100	97.037	Sphenodon_punctatus
ENSNLEG00000006524	SRSF6	63	84.706	ENSSPAG00000021913	-	86	84.706	Stegastes_partitus
ENSNLEG00000006524	SRSF6	98	61.871	ENSSPAG00000002362	srsf6a	67	86.243	Stegastes_partitus
ENSNLEG00000006524	SRSF6	100	96.821	ENSSSCG00000007362	SRSF6	100	96.821	Sus_scrofa
ENSNLEG00000006524	SRSF6	92	84.520	ENSTGUG00000003455	SRSF6	94	85.061	Taeniopygia_guttata
ENSNLEG00000006524	SRSF6	59	92.500	ENSTRUG00000021397	-	87	92.500	Takifugu_rubripes
ENSNLEG00000006524	SRSF6	87	71.096	ENSTNIG00000001692	srsf6a	57	86.022	Tetraodon_nigroviridis
ENSNLEG00000006524	SRSF6	84	94.483	ENSTBEG00000013448	SRSF6	93	94.483	Tupaia_belangeri
ENSNLEG00000006524	SRSF6	75	96.154	ENSTTRG00000015410	SRSF6	100	96.154	Tursiops_truncatus
ENSNLEG00000006524	SRSF6	100	99.259	ENSUAMG00000003559	SRSF6	100	99.259	Ursus_americanus
ENSNLEG00000006524	SRSF6	63	96.774	ENSUMAG00000001154	SRSF6	100	96.774	Ursus_maritimus
ENSNLEG00000006524	SRSF6	75	100.000	ENSVPAG00000003016	SRSF6	74	100.000	Vicugna_pacos
ENSNLEG00000006524	SRSF6	100	78.519	ENSVVUG00000019276	-	100	78.519	Vulpes_vulpes
ENSNLEG00000006524	SRSF6	58	92.308	ENSXMAG00000021849	srsf6a	55	86.413	Xiphophorus_maculatus