EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000006653 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: poly(A) binding protein cytoplasmic 1 like
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 27212 bases
Position: chr13:19808743-19835954
Accession: 100594852
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000008094	PABP	PF00658.18	2.4e-28	1	1
ENSNLEP00000043292	PABP	PF00658.18	4.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000008481	-	2127	XM_012511652	ENSNLEP00000008094	168 (aa)	XP_012367106	G1R4H2
ENSNLET00000045211	-	516	-	ENSNLEP00000043292	171 (aa)	-	A0A2I3HIF7

Gene Model

Click here to download ENSNLEG00000006653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000006653's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000006653	-	92	53.892	ENSNLEG00000030011	-	60	54.037

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000006653	-	93	96.855	ENSG00000101104	PABPC1L	93	96.855	Homo_sapiens
ENSNLEG00000006653	-	100	92.857	ENSANAG00000026826	PABPC1L	93	93.711	Aotus_nancymaae
ENSNLEG00000006653	-	96	75.776	ENSBTAG00000050862	-	82	77.333	Bos_taurus
ENSNLEG00000006653	-	100	94.048	ENSCJAG00000017628	PABPC1L	93	93.082	Callithrix_jacchus
ENSNLEG00000006653	-	100	83.333	ENSTSYG00000006645	PABPC1L	91	87.407	Carlito_syrichta
ENSNLEG00000006653	-	100	92.262	ENSCCAG00000023338	PABPC1L	90	94.776	Cebus_capucinus
ENSNLEG00000006653	-	93	96.154	ENSCATG00000034065	PABPC1L	93	94.969	Cercocebus_atys
ENSNLEG00000006653	-	89	58.000	ENSCPBG00000017765	-	79	59.712	Chrysemys_picta_bellii
ENSNLEG00000006653	-	93	75.758	ENSCANG00000037530	PABPC1L	91	73.585	Colobus_angolensis_palliatus
ENSNLEG00000006653	-	93	74.214	ENSEASG00005023406	-	86	78.417	Equus_asinus_asinus
ENSNLEG00000006653	-	100	76.190	ENSECAG00000022681	PABPC1L	93	76.433	Equus_caballus
ENSNLEG00000006653	-	92	97.452	ENSGGOG00000004584	PABPC1L	93	96.855	Gorilla_gorilla
ENSNLEG00000006653	-	100	97.024	ENSMFAG00000040365	PABPC1L	91	97.222	Macaca_fascicularis
ENSNLEG00000006653	-	84	97.222	ENSMMUG00000013209	-	91	97.222	Macaca_mulatta
ENSNLEG00000006653	-	93	86.792	ENSMNEG00000032298	PABPC1L	90	83.333	Macaca_nemestrina
ENSNLEG00000006653	-	93	96.154	ENSMLEG00000043139	PABPC1L	93	95.597	Mandrillus_leucophaeus
ENSNLEG00000006653	-	96	83.851	ENSMICG00000000974	-	92	84.672	Microcebus_murinus
ENSNLEG00000006653	-	93	96.855	ENSPPAG00000039677	PABPC1L	93	96.855	Pan_paniscus
ENSNLEG00000006653	-	87	78.767	ENSPPRG00000020242	-	90	80.597	Panthera_pardus
ENSNLEG00000006653	-	93	96.855	ENSPTRG00000044192	-	93	96.855	Pan_troglodytes
ENSNLEG00000006653	-	93	96.154	ENSPANG00000018788	PABPC1L	93	95.597	Papio_anubis
ENSNLEG00000006653	-	54	80.000	ENSPREG00000015197	-	73	80.000	Poecilia_reticulata
ENSNLEG00000006653	-	93	78.616	ENSPCOG00000020630	PABPC1L	90	82.836	Propithecus_coquereli
ENSNLEG00000006653	-	93	94.872	ENSRBIG00000035381	PABPC1L	93	94.340	Rhinopithecus_bieti
ENSNLEG00000006653	-	93	95.513	ENSRROG00000044498	PABPC1L	93	94.969	Rhinopithecus_roxellana
ENSNLEG00000006653	-	100	76.190	ENSSBOG00000020828	-	92	77.070	Saimiri_boliviensis_boliviensis
ENSNLEG00000006653	-	100	92.262	ENSSBOG00000009532	-	93	93.082	Saimiri_boliviensis_boliviensis
ENSNLEG00000006653	-	89	78.000	ENSUAMG00000017682	PABPC1L	90	78.986	Ursus_americanus