EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000007510 (Gene tree)
Gene ID: 100590695
Gene Symbol: CSTF2
Alias: CstF-64
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 21518 bases
Position: chrX:89054438-89075955
Accession: 100590695
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000030371	RRM_1	PF00076.22	1.8e-25	1	1
ENSNLEP00000009141	RRM_1	PF00076.22	2.2e-25	1	1
ENSNLEP00000033210	RRM_1	PF00076.22	2.2e-25	1	1
ENSNLEP00000041639	RRM_1	PF00076.22	2.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000009580	CSTF2-203	1719	-	ENSNLEP00000009141	572 (aa)	-	G1R7G7
ENSNLET00000043117	CSTF2-202	2655	XM_003276444	ENSNLEP00000041639	597 (aa)	XP_003276492	A0A2I3HDC7
ENSNLET00000046606	CSTF2-204	1659	-	ENSNLEP00000030371	552 (aa)	-	A0A2I3GGD6
ENSNLET00000051848	CSTF2-201	2012	XM_003276443	ENSNLEP00000033210	577 (aa)	XP_003276491	A0A2I3GPP0

Gene Model

Click here to download ENSNLEG00000007510's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000007510's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000007510	CSTF2	99	65.934	ENSNLEG00000012025	CSTF2T	99	68.051

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000007510	CSTF2	100	99.665	ENSG00000101811	CSTF2	100	99.665	Homo_sapiens
ENSNLEG00000007510	CSTF2	99	61.239	ENSAPOG00000005630	cstf2	97	61.307	Acanthochromis_polyacanthus
ENSNLEG00000007510	CSTF2	100	95.861	ENSAMEG00000002082	CSTF2	100	95.861	Ailuropoda_melanoleuca
ENSNLEG00000007510	CSTF2	87	82.231	ENSACIG00000012852	cstf2	96	59.785	Amphilophus_citrinellus
ENSNLEG00000007510	CSTF2	99	60.568	ENSAOCG00000020905	cstf2	97	61.661	Amphiprion_ocellaris
ENSNLEG00000007510	CSTF2	99	60.568	ENSAPEG00000006526	cstf2	97	61.661	Amphiprion_percula
ENSNLEG00000007510	CSTF2	87	80.247	ENSATEG00000018186	cstf2	97	59.649	Anabas_testudineus
ENSNLEG00000007510	CSTF2	97	78.778	ENSAPLG00000007255	CSTF2	98	78.319	Anas_platyrhynchos
ENSNLEG00000007510	CSTF2	100	99.094	ENSANAG00000022342	CSTF2	100	99.094	Aotus_nancymaae
ENSNLEG00000007510	CSTF2	99	60.963	ENSACLG00000000779	cstf2	93	62.186	Astatotilapia_calliptera
ENSNLEG00000007510	CSTF2	72	98.413	ENSAMXG00000021477	cstf2	96	98.413	Astyanax_mexicanus
ENSNLEG00000007510	CSTF2	100	95.979	ENSBTAG00000003547	CSTF2	100	95.979	Bos_taurus
ENSNLEG00000007510	CSTF2	100	98.827	ENSCJAG00000004422	CSTF2	100	98.827	Callithrix_jacchus
ENSNLEG00000007510	CSTF2	100	96.360	ENSCAFG00000017551	CSTF2	100	96.360	Canis_familiaris
ENSNLEG00000007510	CSTF2	100	96.482	ENSCAFG00020007619	CSTF2	100	96.482	Canis_lupus_dingo
ENSNLEG00000007510	CSTF2	100	96.329	ENSCHIG00000016994	CSTF2	100	96.329	Capra_hircus
ENSNLEG00000007510	CSTF2	100	98.660	ENSTSYG00000006529	CSTF2	100	98.660	Carlito_syrichta
ENSNLEG00000007510	CSTF2	100	95.812	ENSCPOG00000015255	CSTF2	100	95.812	Cavia_porcellus
ENSNLEG00000007510	CSTF2	100	99.094	ENSCCAG00000032975	CSTF2	100	99.094	Cebus_capucinus
ENSNLEG00000007510	CSTF2	100	99.497	ENSCATG00000022835	CSTF2	100	99.497	Cercocebus_atys
ENSNLEG00000007510	CSTF2	100	96.147	ENSCLAG00000001904	CSTF2	100	96.147	Chinchilla_lanigera
ENSNLEG00000007510	CSTF2	100	99.665	ENSCSAG00000010360	CSTF2	100	99.665	Chlorocebus_sabaeus
ENSNLEG00000007510	CSTF2	70	100.000	ENSCHOG00000012803	CSTF2	75	100.000	Choloepus_hoffmanni
ENSNLEG00000007510	CSTF2	100	76.516	ENSCPBG00000014293	CSTF2	100	76.271	Chrysemys_picta_bellii
ENSNLEG00000007510	CSTF2	100	99.665	ENSCANG00000030612	CSTF2	100	99.665	Colobus_angolensis_palliatus
ENSNLEG00000007510	CSTF2	100	92.586	ENSCGRG00001023023	Cstf2	100	92.586	Cricetulus_griseus_chok1gshd
ENSNLEG00000007510	CSTF2	100	89.483	ENSCGRG00000003897	Cstf2	100	89.483	Cricetulus_griseus_crigri
ENSNLEG00000007510	CSTF2	87	82.988	ENSCVAG00000005731	cstf2	96	62.278	Cyprinodon_variegatus
ENSNLEG00000007510	CSTF2	72	98.182	ENSDARG00000090788	cstf2	93	92.188	Danio_rerio
ENSNLEG00000007510	CSTF2	100	92.919	ENSDORG00000007195	Cstf2	100	92.919	Dipodomys_ordii
ENSNLEG00000007510	CSTF2	73	93.243	ENSETEG00000004931	CSTF2	68	93.243	Echinops_telfairi
ENSNLEG00000007510	CSTF2	100	96.650	ENSEASG00005001216	CSTF2	100	96.650	Equus_asinus_asinus
ENSNLEG00000007510	CSTF2	100	96.650	ENSECAG00000009325	CSTF2	100	96.650	Equus_caballus
ENSNLEG00000007510	CSTF2	100	97.152	ENSFCAG00000007000	CSTF2	100	97.152	Felis_catus
ENSNLEG00000007510	CSTF2	92	77.660	ENSFALG00000003859	CSTF2	100	77.837	Ficedula_albicollis
ENSNLEG00000007510	CSTF2	100	96.360	ENSFDAG00000002416	CSTF2	100	96.360	Fukomys_damarensis
ENSNLEG00000007510	CSTF2	87	81.148	ENSFHEG00000017065	cstf2	93	62.679	Fundulus_heteroclitus
ENSNLEG00000007510	CSTF2	99	57.011	ENSGMOG00000005145	cstf2	99	59.002	Gadus_morhua
ENSNLEG00000007510	CSTF2	100	79.174	ENSGALG00000006760	CSTF2	100	85.333	Gallus_gallus
ENSNLEG00000007510	CSTF2	99	59.747	ENSGAFG00000020027	cstf2	96	61.279	Gambusia_affinis
ENSNLEG00000007510	CSTF2	99	56.401	ENSGACG00000017326	cstf2	94	81.633	Gasterosteus_aculeatus
ENSNLEG00000007510	CSTF2	100	78.469	ENSGAGG00000006037	CSTF2	100	78.583	Gopherus_agassizii
ENSNLEG00000007510	CSTF2	100	99.665	ENSGGOG00000022267	CSTF2	100	99.665	Gorilla_gorilla
ENSNLEG00000007510	CSTF2	99	60.893	ENSHBUG00000016183	cstf2	93	62.118	Haplochromis_burtoni
ENSNLEG00000007510	CSTF2	100	81.976	ENSHGLG00000013455	-	100	81.976	Heterocephalus_glaber_female
ENSNLEG00000007510	CSTF2	100	96.707	ENSHGLG00000000659	-	100	96.707	Heterocephalus_glaber_female
ENSNLEG00000007510	CSTF2	100	96.707	ENSHGLG00100001130	-	100	96.707	Heterocephalus_glaber_male
ENSNLEG00000007510	CSTF2	100	82.149	ENSHGLG00100015391	-	100	82.149	Heterocephalus_glaber_male
ENSNLEG00000007510	CSTF2	99	62.612	ENSHCOG00000005157	cstf2	97	63.148	Hippocampus_comes
ENSNLEG00000007510	CSTF2	100	60.653	ENSIPUG00000017839	cstf2	99	60.922	Ictalurus_punctatus
ENSNLEG00000007510	CSTF2	100	95.841	ENSSTOG00000023445	CSTF2	100	95.841	Ictidomys_tridecemlineatus
ENSNLEG00000007510	CSTF2	100	94.454	ENSJJAG00000020507	Cstf2	100	94.454	Jaculus_jaculus
ENSNLEG00000007510	CSTF2	99	59.347	ENSKMAG00000001068	cstf2	96	62.138	Kryptolebias_marmoratus
ENSNLEG00000007510	CSTF2	56	94.915	ENSLBEG00000028720	cstf2	87	89.062	Labrus_bergylta
ENSNLEG00000007510	CSTF2	99	66.722	ENSLACG00000015927	CSTF2	99	67.805	Latimeria_chalumnae
ENSNLEG00000007510	CSTF2	98	77.778	ENSLOCG00000015300	cstf2	93	65.345	Lepisosteus_oculatus
ENSNLEG00000007510	CSTF2	100	92.462	ENSLAFG00000000474	CSTF2	100	92.462	Loxodonta_africana
ENSNLEG00000007510	CSTF2	100	99.665	ENSMFAG00000043888	CSTF2	100	99.665	Macaca_fascicularis
ENSNLEG00000007510	CSTF2	100	99.638	ENSMMUG00000013008	CSTF2	100	99.638	Macaca_mulatta
ENSNLEG00000007510	CSTF2	100	99.665	ENSMNEG00000041824	CSTF2	100	99.665	Macaca_nemestrina
ENSNLEG00000007510	CSTF2	100	99.665	ENSMLEG00000036870	CSTF2	100	99.665	Mandrillus_leucophaeus
ENSNLEG00000007510	CSTF2	82	79.399	ENSMAMG00000020364	cstf2	96	59.963	Mastacembelus_armatus
ENSNLEG00000007510	CSTF2	99	60.963	ENSMZEG00005007200	cstf2	96	62.186	Maylandia_zebra
ENSNLEG00000007510	CSTF2	93	69.463	ENSMGAG00000004139	CSTF2	100	84.861	Meleagris_gallopavo
ENSNLEG00000007510	CSTF2	100	92.931	ENSMAUG00000000965	Cstf2	100	92.931	Mesocricetus_auratus
ENSNLEG00000007510	CSTF2	100	96.482	ENSMICG00000014121	CSTF2	100	96.482	Microcebus_murinus
ENSNLEG00000007510	CSTF2	100	92.174	ENSMOCG00000008081	Cstf2	100	92.174	Microtus_ochrogaster
ENSNLEG00000007510	CSTF2	84	92.308	ENSMMOG00000000538	cstf2	97	55.793	Mola_mola
ENSNLEG00000007510	CSTF2	100	80.066	ENSMODG00000011785	CSTF2	100	82.013	Monodelphis_domestica
ENSNLEG00000007510	CSTF2	100	92.931	MGP_CAROLIEiJ_G0033383	Cstf2	100	92.931	Mus_caroli
ENSNLEG00000007510	CSTF2	100	92.931	ENSMUSG00000031256	Cstf2	100	92.931	Mus_musculus
ENSNLEG00000007510	CSTF2	100	92.919	MGP_PahariEiJ_G0031923	Cstf2	100	93.092	Mus_pahari
ENSNLEG00000007510	CSTF2	100	92.931	MGP_SPRETEiJ_G0034548	Cstf2	100	92.931	Mus_spretus
ENSNLEG00000007510	CSTF2	100	91.111	ENSMPUG00000002339	CSTF2	100	91.111	Mustela_putorius_furo
ENSNLEG00000007510	CSTF2	100	89.666	ENSMLUG00000004598	CSTF2	98	89.666	Myotis_lucifugus
ENSNLEG00000007510	CSTF2	100	94.819	ENSNGAG00000021985	Cstf2	100	94.991	Nannospalax_galili
ENSNLEG00000007510	CSTF2	92	63.054	ENSNBRG00000021694	cstf2	100	58.101	Neolamprologus_brichardi
ENSNLEG00000007510	CSTF2	100	78.497	ENSMEUG00000007875	-	100	79.895	Notamacropus_eugenii
ENSNLEG00000007510	CSTF2	91	80.038	ENSMEUG00000014025	-	100	81.574	Notamacropus_eugenii
ENSNLEG00000007510	CSTF2	100	82.517	ENSMEUG00000011186	-	100	84.091	Notamacropus_eugenii
ENSNLEG00000007510	CSTF2	90	80.995	ENSOPRG00000003106	CSTF2	87	80.995	Ochotona_princeps
ENSNLEG00000007510	CSTF2	100	95.494	ENSODEG00000002059	CSTF2	100	95.494	Octodon_degus
ENSNLEG00000007510	CSTF2	93	79.600	ENSONIG00000002631	cstf2	87	75.812	Oreochromis_niloticus
ENSNLEG00000007510	CSTF2	88	98.214	ENSOANG00000004208	CSTF2	87	90.000	Ornithorhynchus_anatinus
ENSNLEG00000007510	CSTF2	100	94.974	ENSOCUG00000010468	CSTF2	100	94.974	Oryctolagus_cuniculus
ENSNLEG00000007510	CSTF2	86	80.498	ENSORLG00000001380	cstf2	97	59.051	Oryzias_latipes
ENSNLEG00000007510	CSTF2	86	80.913	ENSORLG00020021917	cstf2	97	59.402	Oryzias_latipes_hni
ENSNLEG00000007510	CSTF2	86	80.498	ENSORLG00015011996	cstf2	97	59.051	Oryzias_latipes_hsok
ENSNLEG00000007510	CSTF2	86	81.328	ENSOMEG00000015507	cstf2	97	60.498	Oryzias_melastigma
ENSNLEG00000007510	CSTF2	100	91.256	ENSOGAG00000011192	CSTF2	100	90.143	Otolemur_garnettii
ENSNLEG00000007510	CSTF2	100	96.329	ENSOARG00000001022	CSTF2	100	96.329	Ovis_aries
ENSNLEG00000007510	CSTF2	100	99.665	ENSPPAG00000031804	CSTF2	100	99.665	Pan_paniscus
ENSNLEG00000007510	CSTF2	100	97.320	ENSPPRG00000022492	CSTF2	100	97.320	Panthera_pardus
ENSNLEG00000007510	CSTF2	100	96.985	ENSPTIG00000009922	CSTF2	100	96.985	Panthera_tigris_altaica
ENSNLEG00000007510	CSTF2	100	99.665	ENSPTRG00000022090	CSTF2	100	99.665	Pan_troglodytes
ENSNLEG00000007510	CSTF2	100	99.665	ENSPANG00000002303	CSTF2	100	99.665	Papio_anubis
ENSNLEG00000007510	CSTF2	99	63.240	ENSPKIG00000005033	cstf2	97	61.431	Paramormyrops_kingsleyae
ENSNLEG00000007510	CSTF2	87	81.743	ENSPMGG00000006534	cstf2	97	59.441	Periophthalmus_magnuspinnatus
ENSNLEG00000007510	CSTF2	100	92.069	ENSPEMG00000019415	Cstf2	100	92.069	Peromyscus_maniculatus_bairdii
ENSNLEG00000007510	CSTF2	100	80.952	ENSPCIG00000002989	CSTF2	100	82.594	Phascolarctos_cinereus
ENSNLEG00000007510	CSTF2	99	56.993	ENSPLAG00000011176	cstf2	96	59.549	Poecilia_latipinna
ENSNLEG00000007510	CSTF2	99	56.993	ENSPMEG00000017743	cstf2	96	59.201	Poecilia_mexicana
ENSNLEG00000007510	CSTF2	59	71.429	ENSPREG00000011481	cstf2	97	61.160	Poecilia_reticulata
ENSNLEG00000007510	CSTF2	100	99.832	ENSPPYG00000020541	CSTF2	100	99.832	Pongo_abelii
ENSNLEG00000007510	CSTF2	100	98.007	ENSPCOG00000027744	CSTF2	100	98.007	Propithecus_coquereli
ENSNLEG00000007510	CSTF2	97	81.149	ENSPVAG00000008342	CSTF2	100	81.149	Pteropus_vampyrus
ENSNLEG00000007510	CSTF2	59	91.781	ENSPNYG00000010852	cstf2	94	91.781	Pundamilia_nyererei
ENSNLEG00000007510	CSTF2	99	61.698	ENSPNAG00000018887	cstf2	97	62.045	Pygocentrus_nattereri
ENSNLEG00000007510	CSTF2	100	92.522	ENSRNOG00000048025	Cstf2	100	92.522	Rattus_norvegicus
ENSNLEG00000007510	CSTF2	100	97.920	ENSRBIG00000030745	CSTF2	100	97.920	Rhinopithecus_bieti
ENSNLEG00000007510	CSTF2	100	99.665	ENSRROG00000045042	CSTF2	100	99.665	Rhinopithecus_roxellana
ENSNLEG00000007510	CSTF2	100	98.913	ENSSBOG00000021649	CSTF2	100	98.913	Saimiri_boliviensis_boliviensis
ENSNLEG00000007510	CSTF2	98	100.000	ENSSHAG00000003681	CSTF2	92	83.133	Sarcophilus_harrisii
ENSNLEG00000007510	CSTF2	99	64.060	ENSSFOG00015006348	cstf2	98	63.471	Scleropages_formosus
ENSNLEG00000007510	CSTF2	99	58.633	ENSSMAG00000013463	cstf2	97	59.520	Scophthalmus_maximus
ENSNLEG00000007510	CSTF2	100	65.179	ENSSPUG00000005288	-	98	80.508	Sphenodon_punctatus
ENSNLEG00000007510	CSTF2	100	95.645	ENSSSCG00000012486	CSTF2	100	97.306	Sus_scrofa
ENSNLEG00000007510	CSTF2	100	79.252	ENSTGUG00000002253	CSTF2	100	79.422	Taeniopygia_guttata
ENSNLEG00000007510	CSTF2	99	59.130	ENSTNIG00000016860	cstf2	99	59.337	Tetraodon_nigroviridis
ENSNLEG00000007510	CSTF2	55	100.000	ENSTBEG00000010029	-	69	100.000	Tupaia_belangeri
ENSNLEG00000007510	CSTF2	100	96.880	ENSTTRG00000013556	CSTF2	100	96.880	Tursiops_truncatus
ENSNLEG00000007510	CSTF2	100	96.346	ENSUAMG00000026605	CSTF2	100	96.346	Ursus_americanus
ENSNLEG00000007510	CSTF2	100	89.685	ENSUMAG00000012417	CSTF2	100	98.616	Ursus_maritimus
ENSNLEG00000007510	CSTF2	73	96.501	ENSVPAG00000006466	CSTF2	72	96.501	Vicugna_pacos
ENSNLEG00000007510	CSTF2	100	96.534	ENSVVUG00000004717	CSTF2	100	96.534	Vulpes_vulpes
ENSNLEG00000007510	CSTF2	82	92.188	ENSXETG00000009642	cstf2	100	66.552	Xenopus_tropicalis
ENSNLEG00000007510	CSTF2	88	76.829	ENSXCOG00000016436	cstf2	84	96.970	Xiphophorus_couchianus
ENSNLEG00000007510	CSTF2	58	71.171	ENSXMAG00000013524	cstf2	97	57.426	Xiphophorus_maculatus