EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000007888 (Gene tree)
Gene ID: 100600607
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 2736 bases
Position: chr5:136470853-136473588
Accession: 100600607
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000009615	RNA_ligase	PF09414.10	3.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000010075	LIG4-201	2736	XM_003270168	ENSNLEP00000009615	911 (aa)	XP_003270216	G1R8S8

Gene Model

Click here to download ENSNLEG00000007888's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000007888's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000007888	LIG4	100	97.585	ENSG00000174405	LIG4	100	97.630	Homo_sapiens
ENSNLEG00000007888	LIG4	99	65.055	ENSAPOG00000000866	lig4	99	65.275	Acanthochromis_polyacanthus
ENSNLEG00000007888	LIG4	100	89.462	ENSAMEG00000019685	LIG4	99	89.462	Ailuropoda_melanoleuca
ENSNLEG00000007888	LIG4	99	65.787	ENSACIG00000018309	lig4	99	66.007	Amphilophus_citrinellus
ENSNLEG00000007888	LIG4	99	65.055	ENSAOCG00000011768	lig4	99	65.275	Amphiprion_ocellaris
ENSNLEG00000007888	LIG4	99	65.165	ENSAPEG00000017815	lig4	99	65.385	Amphiprion_percula
ENSNLEG00000007888	LIG4	99	65.419	ENSATEG00000005583	lig4	99	65.529	Anabas_testudineus
ENSNLEG00000007888	LIG4	97	75.114	ENSAPLG00000001673	LIG4	99	75.114	Anas_platyrhynchos
ENSNLEG00000007888	LIG4	99	75.858	ENSACAG00000014566	LIG4	99	75.858	Anolis_carolinensis
ENSNLEG00000007888	LIG4	100	95.170	ENSANAG00000012446	LIG4	100	95.170	Aotus_nancymaae
ENSNLEG00000007888	LIG4	99	65.457	ENSACLG00000027051	lig4	99	65.457	Astatotilapia_calliptera
ENSNLEG00000007888	LIG4	99	64.333	ENSAMXG00000008192	lig4	94	64.333	Astyanax_mexicanus
ENSNLEG00000007888	LIG4	100	88.694	ENSBTAG00000015868	LIG4	100	88.694	Bos_taurus
ENSNLEG00000007888	LIG4	100	94.512	ENSCJAG00000014689	LIG4	100	94.512	Callithrix_jacchus
ENSNLEG00000007888	LIG4	100	90.231	ENSCAFG00000006031	LIG4	100	90.231	Canis_familiaris
ENSNLEG00000007888	LIG4	100	90.231	ENSCAFG00020021230	LIG4	100	90.231	Canis_lupus_dingo
ENSNLEG00000007888	LIG4	100	88.584	ENSCHIG00000001019	LIG4	100	88.584	Capra_hircus
ENSNLEG00000007888	LIG4	99	88.594	ENSCAPG00000006284	LIG4	99	88.594	Cavia_aperea
ENSNLEG00000007888	LIG4	100	88.584	ENSCPOG00000014266	LIG4	100	88.584	Cavia_porcellus
ENSNLEG00000007888	LIG4	100	94.841	ENSCCAG00000019971	LIG4	100	94.841	Cebus_capucinus
ENSNLEG00000007888	LIG4	100	96.487	ENSCATG00000021075	LIG4	100	96.487	Cercocebus_atys
ENSNLEG00000007888	LIG4	100	89.243	ENSCLAG00000003376	LIG4	100	89.243	Chinchilla_lanigera
ENSNLEG00000007888	LIG4	100	96.597	ENSCSAG00000000211	LIG4	100	96.597	Chlorocebus_sabaeus
ENSNLEG00000007888	LIG4	99	79.360	ENSCPBG00000023291	LIG4	100	78.758	Chrysemys_picta_bellii
ENSNLEG00000007888	LIG4	68	45.310	ENSCING00000009536	-	95	45.310	Ciona_intestinalis
ENSNLEG00000007888	LIG4	83	45.204	ENSCSAVG00000010336	-	98	45.204	Ciona_savignyi
ENSNLEG00000007888	LIG4	100	96.597	ENSCANG00000005805	LIG4	100	96.597	Colobus_angolensis_palliatus
ENSNLEG00000007888	LIG4	100	86.513	ENSCGRG00001012072	Lig4	100	86.513	Cricetulus_griseus_chok1gshd
ENSNLEG00000007888	LIG4	100	86.513	ENSCGRG00000013417	Lig4	100	86.513	Cricetulus_griseus_crigri
ENSNLEG00000007888	LIG4	97	66.136	ENSCSEG00000013905	lig4	95	66.136	Cynoglossus_semilaevis
ENSNLEG00000007888	LIG4	99	66.002	ENSCVAG00000007896	lig4	99	66.002	Cyprinodon_variegatus
ENSNLEG00000007888	LIG4	99	64.009	ENSDARG00000060620	lig4	98	64.009	Danio_rerio
ENSNLEG00000007888	LIG4	100	89.803	ENSDNOG00000000513	LIG4	100	89.803	Dasypus_novemcinctus
ENSNLEG00000007888	LIG4	100	88.584	ENSDORG00000027303	Lig4	100	88.584	Dipodomys_ordii
ENSNLEG00000007888	LIG4	89	31.228	FBgn0030506	Lig4	91	31.228	Drosophila_melanogaster
ENSNLEG00000007888	LIG4	99	84.479	ENSETEG00000015563	LIG4	100	84.812	Echinops_telfairi
ENSNLEG00000007888	LIG4	99	43.501	ENSEBUG00000014243	lig4	99	43.501	Eptatretus_burgeri
ENSNLEG00000007888	LIG4	100	90.999	ENSEASG00005022073	LIG4	100	90.999	Equus_asinus_asinus
ENSNLEG00000007888	LIG4	100	90.670	ENSECAG00000003257	LIG4	100	90.670	Equus_caballus
ENSNLEG00000007888	LIG4	99	66.593	ENSELUG00000006787	lig4	99	66.703	Esox_lucius
ENSNLEG00000007888	LIG4	100	89.682	ENSFCAG00000031985	LIG4	100	89.682	Felis_catus
ENSNLEG00000007888	LIG4	89	75.735	ENSFALG00000004214	LIG4	99	75.735	Ficedula_albicollis
ENSNLEG00000007888	LIG4	100	89.243	ENSFDAG00000008973	LIG4	100	89.243	Fukomys_damarensis
ENSNLEG00000007888	LIG4	99	64.895	ENSFHEG00000007398	lig4	89	65.006	Fundulus_heteroclitus
ENSNLEG00000007888	LIG4	85	63.928	ENSGMOG00000012843	lig4	99	63.928	Gadus_morhua
ENSNLEG00000007888	LIG4	100	75.000	ENSGALG00000016854	LIG4	100	75.000	Gallus_gallus
ENSNLEG00000007888	LIG4	99	65.145	ENSGAFG00000019779	lig4	95	64.945	Gambusia_affinis
ENSNLEG00000007888	LIG4	99	63.123	ENSGACG00000014135	lig4	99	63.123	Gasterosteus_aculeatus
ENSNLEG00000007888	LIG4	100	97.695	ENSGGOG00000027771	LIG4	100	97.695	Gorilla_gorilla
ENSNLEG00000007888	LIG4	99	65.237	ENSHBUG00000006245	lig4	99	65.237	Haplochromis_burtoni
ENSNLEG00000007888	LIG4	100	89.352	ENSHGLG00000000718	LIG4	100	89.352	Heterocephalus_glaber_female
ENSNLEG00000007888	LIG4	100	89.352	ENSHGLG00100003265	LIG4	100	89.352	Heterocephalus_glaber_male
ENSNLEG00000007888	LIG4	99	63.956	ENSHCOG00000012010	lig4	99	63.956	Hippocampus_comes
ENSNLEG00000007888	LIG4	99	64.654	ENSIPUG00000013748	lig4	99	64.654	Ictalurus_punctatus
ENSNLEG00000007888	LIG4	100	89.791	ENSSTOG00000024303	LIG4	100	89.791	Ictidomys_tridecemlineatus
ENSNLEG00000007888	LIG4	100	87.377	ENSJJAG00000006750	Lig4	100	87.377	Jaculus_jaculus
ENSNLEG00000007888	LIG4	99	65.227	ENSKMAG00000001149	lig4	99	65.227	Kryptolebias_marmoratus
ENSNLEG00000007888	LIG4	91	65.625	ENSLBEG00000014578	lig4	100	65.865	Labrus_bergylta
ENSNLEG00000007888	LIG4	99	72.235	ENSLACG00000003282	LIG4	99	72.235	Latimeria_chalumnae
ENSNLEG00000007888	LIG4	99	70.504	ENSLOCG00000008901	lig4	98	70.504	Lepisosteus_oculatus
ENSNLEG00000007888	LIG4	100	87.842	ENSLAFG00000031152	LIG4	100	87.842	Loxodonta_africana
ENSNLEG00000007888	LIG4	100	96.707	ENSMFAG00000037235	LIG4	100	96.707	Macaca_fascicularis
ENSNLEG00000007888	LIG4	100	96.707	ENSMMUG00000008874	LIG4	100	96.707	Macaca_mulatta
ENSNLEG00000007888	LIG4	100	96.707	ENSMNEG00000023575	LIG4	100	96.707	Macaca_nemestrina
ENSNLEG00000007888	LIG4	100	96.378	ENSMLEG00000026720	LIG4	100	96.378	Mandrillus_leucophaeus
ENSNLEG00000007888	LIG4	99	65.275	ENSMAMG00000008472	lig4	99	65.495	Mastacembelus_armatus
ENSNLEG00000007888	LIG4	99	65.457	ENSMZEG00005001855	lig4	99	65.457	Maylandia_zebra
ENSNLEG00000007888	LIG4	99	76.070	ENSMGAG00000015532	LIG4	99	76.070	Meleagris_gallopavo
ENSNLEG00000007888	LIG4	100	84.523	ENSMOCG00000019000	Lig4	100	84.523	Microtus_ochrogaster
ENSNLEG00000007888	LIG4	99	64.673	ENSMMOG00000004390	lig4	99	64.673	Mola_mola
ENSNLEG00000007888	LIG4	100	83.754	ENSMODG00000025064	LIG4	100	84.211	Monodelphis_domestica
ENSNLEG00000007888	LIG4	99	65.449	ENSMALG00000008555	lig4	99	65.449	Monopterus_albus
ENSNLEG00000007888	LIG4	100	86.608	MGP_CAROLIEiJ_G0030809	Lig4	100	86.608	Mus_caroli
ENSNLEG00000007888	LIG4	100	86.389	ENSMUSG00000049717	Lig4	100	86.389	Mus_musculus
ENSNLEG00000007888	LIG4	100	86.608	MGP_PahariEiJ_G0021270	Lig4	100	86.608	Mus_pahari
ENSNLEG00000007888	LIG4	100	86.389	MGP_SPRETEiJ_G0031917	Lig4	100	86.389	Mus_spretus
ENSNLEG00000007888	LIG4	100	89.352	ENSMPUG00000018675	LIG4	100	89.352	Mustela_putorius_furo
ENSNLEG00000007888	LIG4	100	90.560	ENSMLUG00000001267	LIG4	100	90.560	Myotis_lucifugus
ENSNLEG00000007888	LIG4	100	86.937	ENSNGAG00000013258	Lig4	100	86.937	Nannospalax_galili
ENSNLEG00000007888	LIG4	99	65.677	ENSNBRG00000021252	lig4	99	65.677	Neolamprologus_brichardi
ENSNLEG00000007888	LIG4	100	87.925	ENSOPRG00000005765	LIG4	100	87.925	Ochotona_princeps
ENSNLEG00000007888	LIG4	100	87.377	ENSODEG00000019683	LIG4	100	87.377	Octodon_degus
ENSNLEG00000007888	LIG4	99	65.237	ENSONIG00000011969	lig4	98	65.457	Oreochromis_niloticus
ENSNLEG00000007888	LIG4	100	90.889	ENSOCUG00000015734	LIG4	100	90.889	Oryctolagus_cuniculus
ENSNLEG00000007888	LIG4	99	63.956	ENSORLG00000004041	lig4	99	63.956	Oryzias_latipes
ENSNLEG00000007888	LIG4	99	64.396	ENSORLG00020019607	lig4	99	64.396	Oryzias_latipes_hni
ENSNLEG00000007888	LIG4	99	64.066	ENSORLG00015017754	lig4	99	64.066	Oryzias_latipes_hsok
ENSNLEG00000007888	LIG4	74	70.118	ENSOMEG00000003459	lig4	98	70.118	Oryzias_melastigma
ENSNLEG00000007888	LIG4	100	91.667	ENSOGAG00000032120	LIG4	99	91.667	Otolemur_garnettii
ENSNLEG00000007888	LIG4	82	90.336	ENSOARG00000005590	LIG4	98	90.336	Ovis_aries
ENSNLEG00000007888	LIG4	100	97.256	ENSPPAG00000032998	LIG4	100	97.256	Pan_paniscus
ENSNLEG00000007888	LIG4	100	90.121	ENSPPRG00000017804	LIG4	100	90.121	Panthera_pardus
ENSNLEG00000007888	LIG4	100	90.011	ENSPTIG00000010051	LIG4	100	90.011	Panthera_tigris_altaica
ENSNLEG00000007888	LIG4	100	97.366	ENSPTRG00000006025	LIG4	100	97.366	Pan_troglodytes
ENSNLEG00000007888	LIG4	100	96.597	ENSPANG00000007562	LIG4	100	96.597	Papio_anubis
ENSNLEG00000007888	LIG4	99	66.520	ENSPKIG00000011645	lig4	98	66.520	Paramormyrops_kingsleyae
ENSNLEG00000007888	LIG4	99	78.571	ENSPSIG00000001504	LIG4	99	78.571	Pelodiscus_sinensis
ENSNLEG00000007888	LIG4	99	63.333	ENSPMGG00000013486	lig4	99	62.898	Periophthalmus_magnuspinnatus
ENSNLEG00000007888	LIG4	100	86.842	ENSPEMG00000000076	Lig4	100	86.842	Peromyscus_maniculatus_bairdii
ENSNLEG00000007888	LIG4	100	83.553	ENSPCIG00000021882	LIG4	100	83.553	Phascolarctos_cinereus
ENSNLEG00000007888	LIG4	99	65.184	ENSPFOG00000000797	lig4	99	65.055	Poecilia_formosa
ENSNLEG00000007888	LIG4	99	65.072	ENSPLAG00000001196	lig4	99	64.945	Poecilia_latipinna
ENSNLEG00000007888	LIG4	99	65.295	ENSPMEG00000021353	lig4	99	65.165	Poecilia_mexicana
ENSNLEG00000007888	LIG4	99	65.072	ENSPREG00000007323	lig4	99	64.835	Poecilia_reticulata
ENSNLEG00000007888	LIG4	100	97.585	ENSPPYG00000005540	LIG4	100	97.585	Pongo_abelii
ENSNLEG00000007888	LIG4	100	90.340	ENSPVAG00000016403	LIG4	100	90.340	Pteropus_vampyrus
ENSNLEG00000007888	LIG4	99	65.347	ENSPNYG00000009660	lig4	99	65.347	Pundamilia_nyererei
ENSNLEG00000007888	LIG4	100	64.294	ENSPNAG00000028069	LIG4	100	64.294	Pygocentrus_nattereri
ENSNLEG00000007888	LIG4	100	64.294	ENSPNAG00000028056	lig4	100	64.294	Pygocentrus_nattereri
ENSNLEG00000007888	LIG4	100	85.291	ENSRNOG00000014605	Lig4	100	85.291	Rattus_norvegicus
ENSNLEG00000007888	LIG4	100	95.170	ENSRBIG00000039962	LIG4	100	95.170	Rhinopithecus_bieti
ENSNLEG00000007888	LIG4	100	96.048	ENSRROG00000006040	LIG4	100	96.048	Rhinopithecus_roxellana
ENSNLEG00000007888	LIG4	100	94.512	ENSSBOG00000019029	LIG4	100	94.512	Saimiri_boliviensis_boliviensis
ENSNLEG00000007888	LIG4	100	80.022	ENSSHAG00000009525	LIG4	100	80.592	Sarcophilus_harrisii
ENSNLEG00000007888	LIG4	100	65.611	ENSSFOG00015012835	lig4	100	65.611	Scleropages_formosus
ENSNLEG00000007888	LIG4	99	63.566	ENSSMAG00000011267	lig4	99	63.566	Scophthalmus_maximus
ENSNLEG00000007888	LIG4	99	66.186	ENSSDUG00000010343	lig4	98	66.186	Seriola_dumerili
ENSNLEG00000007888	LIG4	99	64.286	ENSSLDG00000003239	lig4	99	64.286	Seriola_lalandi_dorsalis
ENSNLEG00000007888	LIG4	100	82.823	ENSSARG00000006573	LIG4	100	82.823	Sorex_araneus
ENSNLEG00000007888	LIG4	93	77.251	ENSSPUG00000002444	LIG4	100	77.251	Sphenodon_punctatus
ENSNLEG00000007888	LIG4	99	65.055	ENSSPAG00000001609	lig4	99	65.055	Stegastes_partitus
ENSNLEG00000007888	LIG4	100	88.035	ENSSSCG00000009540	LIG4	100	88.035	Sus_scrofa
ENSNLEG00000007888	LIG4	99	75.221	ENSTGUG00000010795	LIG4	99	75.221	Taeniopygia_guttata
ENSNLEG00000007888	LIG4	99	64.945	ENSTRUG00000009984	lig4	99	64.945	Takifugu_rubripes
ENSNLEG00000007888	LIG4	99	65.055	ENSTNIG00000010348	lig4	99	65.275	Tetraodon_nigroviridis
ENSNLEG00000007888	LIG4	100	90.889	ENSTBEG00000017741	LIG4	100	90.889	Tupaia_belangeri
ENSNLEG00000007888	LIG4	100	89.572	ENSTTRG00000012660	LIG4	100	89.572	Tursiops_truncatus
ENSNLEG00000007888	LIG4	100	89.572	ENSUAMG00000003773	LIG4	100	89.572	Ursus_americanus
ENSNLEG00000007888	LIG4	99	72.687	ENSXETG00000002654	lig4	99	72.687	Xenopus_tropicalis
ENSNLEG00000007888	LIG4	99	65.184	ENSXCOG00000017401	lig4	99	64.725	Xiphophorus_couchianus
ENSNLEG00000007888	LIG4	99	65.222	ENSXMAG00000015142	lig4	99	64.764	Xiphophorus_maculatus