EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000008088 (Gene tree)
Gene ID: 100604024
Gene Symbol: -
Alias: ASF|MGC5228|SF2|SF2p33|SFRS1|SRp30a
Full Name: serine and arginine rich splicing factor 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 6985 bases
Position: chr14:8609259-8616243
Accession: 100604024
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000009873	RRM_1	PF00076.22	2e-33	1	2
ENSNLEP00000009873	RRM_1	PF00076.22	2e-33	2	2
ENSNLEP00000048927	RRM_1	PF00076.22	7.9e-16	1	1
ENSNLEP00000023868	RRM_1	PF00076.22	6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000010351	-	5632	XM_012503324	ENSNLEP00000009873	253 (aa)	XP_012358778	G1R9I1
ENSNLET00000032827	-	522	-	ENSNLEP00000023868	173 (aa)	-	M3ZAY1
ENSNLET00000051416	-	222	-	ENSNLEP00000048927	73 (aa)	-	A0A2I3HZJ4

Gene Model

Click here to download ENSNLEG00000008088's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03040	Spliceosome	KEGG
nle04657	IL-17 signaling pathway	KEGG
nle05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000008088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000008088	-	79	48.276	ENSNLEG00000016349	SRSF7	53	48.649
ENSNLEG00000008088	-	78	61.404	ENSNLEG00000001615	SRSF5	86	45.968
ENSNLEG00000008088	-	99	68.056	ENSNLEG00000015661	SRSF9	97	62.698
ENSNLEG00000008088	-	79	50.000	ENSNLEG00000010737	SRSF3	63	50.000
ENSNLEG00000008088	-	77	46.429	ENSNLEG00000030787	-	57	39.759
ENSNLEG00000008088	-	77	50.000	ENSNLEG00000006524	SRSF6	58	40.670
ENSNLEG00000008088	-	84	62.295	ENSNLEG00000033316	-	96	54.762

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000008088	-	100	100.000	ENSG00000136450	SRSF1	100	100.000	Homo_sapiens
ENSNLEG00000008088	-	99	90.278	ENSAPOG00000008542	-	100	86.220	Acanthochromis_polyacanthus
ENSNLEG00000008088	-	93	91.176	ENSAPOG00000002748	-	98	84.362	Acanthochromis_polyacanthus
ENSNLEG00000008088	-	99	98.611	ENSAMEG00000002635	SRSF1	99	97.154	Ailuropoda_melanoleuca
ENSNLEG00000008088	-	93	91.176	ENSACIG00000008091	srsf1a	98	78.926	Amphilophus_citrinellus
ENSNLEG00000008088	-	93	91.176	ENSAOCG00000010671	-	98	85.185	Amphiprion_ocellaris
ENSNLEG00000008088	-	99	90.278	ENSAOCG00000000337	-	100	86.508	Amphiprion_ocellaris
ENSNLEG00000008088	-	93	91.176	ENSAPEG00000009915	-	98	85.185	Amphiprion_percula
ENSNLEG00000008088	-	99	90.278	ENSAPEG00000023352	-	99	86.561	Amphiprion_percula
ENSNLEG00000008088	-	93	91.176	ENSATEG00000022403	-	98	84.898	Anabas_testudineus
ENSNLEG00000008088	-	99	87.500	ENSATEG00000021567	-	100	84.959	Anabas_testudineus
ENSNLEG00000008088	-	99	97.222	ENSACAG00000005542	-	99	98.374	Anolis_carolinensis
ENSNLEG00000008088	-	70	92.157	ENSANAG00000025417	-	99	76.016	Aotus_nancymaae
ENSNLEG00000008088	-	100	100.000	ENSANAG00000020583	-	100	100.000	Aotus_nancymaae
ENSNLEG00000008088	-	95	95.652	ENSAMXG00000035996	srsf1a	98	93.145	Astyanax_mexicanus
ENSNLEG00000008088	-	86	95.270	ENSAMXG00000024373	-	94	77.778	Astyanax_mexicanus
ENSNLEG00000008088	-	100	100.000	ENSBTAG00000014766	SRSF1	100	100.000	Bos_taurus
ENSNLEG00000008088	-	97	87.324	ENSCJAG00000008111	-	88	91.371	Callithrix_jacchus
ENSNLEG00000008088	-	100	100.000	ENSCJAG00000041713	-	100	100.000	Callithrix_jacchus
ENSNLEG00000008088	-	100	100.000	ENSCAFG00000017430	SRSF1	100	100.000	Canis_familiaris
ENSNLEG00000008088	-	100	100.000	ENSCAFG00020025632	-	100	100.000	Canis_lupus_dingo
ENSNLEG00000008088	-	99	98.611	ENSCHIG00000010787	SRSF1	99	100.000	Capra_hircus
ENSNLEG00000008088	-	100	100.000	ENSTSYG00000013899	-	100	100.000	Carlito_syrichta
ENSNLEG00000008088	-	100	100.000	ENSCPOG00000032681	-	100	100.000	Cavia_porcellus
ENSNLEG00000008088	-	100	100.000	ENSCCAG00000029484	-	100	100.000	Cebus_capucinus
ENSNLEG00000008088	-	99	94.444	ENSCATG00000005962	-	75	96.629	Cercocebus_atys
ENSNLEG00000008088	-	100	100.000	ENSCATG00000042294	-	100	100.000	Cercocebus_atys
ENSNLEG00000008088	-	100	100.000	ENSCLAG00000014707	-	100	100.000	Chinchilla_lanigera
ENSNLEG00000008088	-	100	99.209	ENSCSAG00000005642	-	100	99.209	Chlorocebus_sabaeus
ENSNLEG00000008088	-	99	98.611	ENSCHOG00000001899	SRSF1	99	100.000	Choloepus_hoffmanni
ENSNLEG00000008088	-	100	98.814	ENSCPBG00000009851	-	100	98.814	Chrysemys_picta_bellii
ENSNLEG00000008088	-	100	100.000	ENSCANG00000029726	-	100	100.000	Colobus_angolensis_palliatus
ENSNLEG00000008088	-	100	100.000	ENSCGRG00001000670	Srsf1	100	100.000	Cricetulus_griseus_chok1gshd
ENSNLEG00000008088	-	100	100.000	ENSCGRG00000005590	Srsf1	100	100.000	Cricetulus_griseus_crigri
ENSNLEG00000008088	-	93	91.176	ENSCSEG00000014272	-	98	84.553	Cynoglossus_semilaevis
ENSNLEG00000008088	-	99	88.889	ENSCSEG00000009973	-	100	80.303	Cynoglossus_semilaevis
ENSNLEG00000008088	-	93	91.176	ENSCVAG00000018617	-	98	85.185	Cyprinodon_variegatus
ENSNLEG00000008088	-	95	84.058	ENSCVAG00000005458	-	98	86.179	Cyprinodon_variegatus
ENSNLEG00000008088	-	95	95.652	ENSDARG00000057691	srsf1a	98	92.095	Danio_rerio
ENSNLEG00000008088	-	96	96.708	ENSDARG00000017843	srsf1b	98	96.708	Danio_rerio
ENSNLEG00000008088	-	100	100.000	ENSDNOG00000011737	-	100	100.000	Dasypus_novemcinctus
ENSNLEG00000008088	-	100	100.000	ENSDORG00000015082	Srsf1	100	100.000	Dipodomys_ordii
ENSNLEG00000008088	-	99	95.833	ENSETEG00000005349	-	63	98.913	Echinops_telfairi
ENSNLEG00000008088	-	100	100.000	ENSEASG00005002922	-	100	100.000	Equus_asinus_asinus
ENSNLEG00000008088	-	99	98.611	ENSECAG00000016654	SRSF1	99	100.000	Equus_caballus
ENSNLEG00000008088	-	99	98.611	ENSEEUG00000009255	-	63	100.000	Erinaceus_europaeus
ENSNLEG00000008088	-	95	92.754	ENSELUG00000021646	srsf1a	98	79.839	Esox_lucius
ENSNLEG00000008088	-	100	100.000	ENSFCAG00000002250	-	100	100.000	Felis_catus
ENSNLEG00000008088	-	88	98.026	ENSFALG00000005062	-	100	82.213	Ficedula_albicollis
ENSNLEG00000008088	-	100	100.000	ENSFDAG00000010646	-	100	100.000	Fukomys_damarensis
ENSNLEG00000008088	-	93	91.176	ENSFHEG00000003174	srsf1a	98	85.185	Fundulus_heteroclitus
ENSNLEG00000008088	-	93	94.118	ENSGMOG00000014787	-	99	82.645	Gadus_morhua
ENSNLEG00000008088	-	99	98.611	ENSGALG00000005525	SRSF1	99	98.780	Gallus_gallus
ENSNLEG00000008088	-	99	88.889	ENSGACG00000020621	srsf1b	100	74.390	Gasterosteus_aculeatus
ENSNLEG00000008088	-	100	98.814	ENSGAGG00000022965	-	100	98.814	Gopherus_agassizii
ENSNLEG00000008088	-	100	100.000	ENSGGOG00000004386	SRSF1	100	100.000	Gorilla_gorilla
ENSNLEG00000008088	-	93	91.176	ENSHBUG00000016788	srsf1a	98	84.774	Haplochromis_burtoni
ENSNLEG00000008088	-	88	98.693	ENSHGLG00000000600	-	100	99.070	Heterocephalus_glaber_female
ENSNLEG00000008088	-	88	98.693	ENSHGLG00000000669	-	100	99.070	Heterocephalus_glaber_female
ENSNLEG00000008088	-	100	100.000	ENSHGLG00100016906	-	100	100.000	Heterocephalus_glaber_male
ENSNLEG00000008088	-	95	88.406	ENSHCOG00000018918	srsf1a	97	81.928	Hippocampus_comes
ENSNLEG00000008088	-	99	95.833	ENSIPUG00000008750	srsf1b	99	95.935	Ictalurus_punctatus
ENSNLEG00000008088	-	95	94.203	ENSIPUG00000017039	srsf1a	98	93.145	Ictalurus_punctatus
ENSNLEG00000008088	-	100	100.000	ENSSTOG00000000243	-	100	100.000	Ictidomys_tridecemlineatus
ENSNLEG00000008088	-	99	97.222	ENSJJAG00000014464	-	95	88.189	Jaculus_jaculus
ENSNLEG00000008088	-	100	100.000	ENSJJAG00000000102	-	100	100.000	Jaculus_jaculus
ENSNLEG00000008088	-	93	91.176	ENSKMAG00000019232	srsf1a	98	83.951	Kryptolebias_marmoratus
ENSNLEG00000008088	-	99	77.778	ENSLBEG00000015294	-	98	83.133	Labrus_bergylta
ENSNLEG00000008088	-	93	91.176	ENSLBEG00000020864	-	98	84.362	Labrus_bergylta
ENSNLEG00000008088	-	95	98.551	ENSLACG00000014160	srsf1a	92	93.878	Latimeria_chalumnae
ENSNLEG00000008088	-	99	98.611	ENSLOCG00000005994	srsf1a	99	97.154	Lepisosteus_oculatus
ENSNLEG00000008088	-	99	98.611	ENSLAFG00000025743	SRSF1	99	100.000	Loxodonta_africana
ENSNLEG00000008088	-	100	100.000	ENSMFAG00000040003	-	100	100.000	Macaca_fascicularis
ENSNLEG00000008088	-	100	100.000	ENSMMUG00000004725	SRSF1	100	100.000	Macaca_mulatta
ENSNLEG00000008088	-	100	97.233	ENSMMUG00000003260	-	100	97.233	Macaca_mulatta
ENSNLEG00000008088	-	100	100.000	ENSMNEG00000027680	-	100	100.000	Macaca_nemestrina
ENSNLEG00000008088	-	100	98.266	ENSMNEG00000015983	-	100	98.266	Macaca_nemestrina
ENSNLEG00000008088	-	100	94.466	ENSMLEG00000015243	-	100	94.466	Mandrillus_leucophaeus
ENSNLEG00000008088	-	99	98.611	ENSMLEG00000040509	SRSF1	99	100.000	Mandrillus_leucophaeus
ENSNLEG00000008088	-	99	88.889	ENSMAMG00000019687	-	100	85.081	Mastacembelus_armatus
ENSNLEG00000008088	-	99	94.444	ENSMAMG00000019691	-	100	88.211	Mastacembelus_armatus
ENSNLEG00000008088	-	93	91.176	ENSMAMG00000018454	-	98	85.185	Mastacembelus_armatus
ENSNLEG00000008088	-	100	100.000	ENSMAUG00000021845	Srsf1	100	100.000	Mesocricetus_auratus
ENSNLEG00000008088	-	100	100.000	ENSMICG00000013639	-	100	100.000	Microcebus_murinus
ENSNLEG00000008088	-	100	100.000	ENSMOCG00000001996	Srsf1	100	100.000	Microtus_ochrogaster
ENSNLEG00000008088	-	93	91.176	ENSMMOG00000014354	srsf1a	98	78.099	Mola_mola
ENSNLEG00000008088	-	99	98.611	ENSMODG00000014781	-	63	98.919	Monodelphis_domestica
ENSNLEG00000008088	-	99	91.667	ENSMALG00000007763	-	79	79.695	Monopterus_albus
ENSNLEG00000008088	-	95	89.855	ENSMALG00000017129	-	75	88.601	Monopterus_albus
ENSNLEG00000008088	-	100	100.000	MGP_CAROLIEiJ_G0016943	Srsf1	100	100.000	Mus_caroli
ENSNLEG00000008088	-	100	100.000	ENSMUSG00000018379	Srsf1	100	100.000	Mus_musculus
ENSNLEG00000008088	-	100	100.000	MGP_PahariEiJ_G0018074	Srsf1	100	100.000	Mus_pahari
ENSNLEG00000008088	-	100	100.000	MGP_SPRETEiJ_G0017790	Srsf1	100	100.000	Mus_spretus
ENSNLEG00000008088	-	99	98.611	ENSMPUG00000015369	SRSF1	99	100.000	Mustela_putorius_furo
ENSNLEG00000008088	-	99	98.611	ENSMLUG00000011040	SRSF1	99	100.000	Myotis_lucifugus
ENSNLEG00000008088	-	99	91.667	ENSMLUG00000023995	-	100	90.323	Myotis_lucifugus
ENSNLEG00000008088	-	99	98.611	ENSNGAG00000011395	Srsf1	99	100.000	Nannospalax_galili
ENSNLEG00000008088	-	99	91.667	ENSNBRG00000008041	srsf1b	80	82.741	Neolamprologus_brichardi
ENSNLEG00000008088	-	99	98.611	ENSMEUG00000002783	-	100	98.425	Notamacropus_eugenii
ENSNLEG00000008088	-	88	98.693	ENSOPRG00000001234	-	100	98.907	Ochotona_princeps
ENSNLEG00000008088	-	100	99.209	ENSODEG00000011481	-	100	99.209	Octodon_degus
ENSNLEG00000008088	-	93	91.176	ENSONIG00000013160	-	98	84.774	Oreochromis_niloticus
ENSNLEG00000008088	-	99	94.444	ENSONIG00000004860	-	81	90.863	Oreochromis_niloticus
ENSNLEG00000008088	-	99	72.222	ENSOCUG00000010894	-	77	71.795	Oryctolagus_cuniculus
ENSNLEG00000008088	-	93	91.176	ENSORLG00000004580	srsf1a	98	85.185	Oryzias_latipes
ENSNLEG00000008088	-	93	91.176	ENSORLG00020009456	srsf1a	98	85.185	Oryzias_latipes_hni
ENSNLEG00000008088	-	93	91.176	ENSORLG00015014384	srsf1a	98	84.774	Oryzias_latipes_hsok
ENSNLEG00000008088	-	70	90.341	ENSOMEG00000004106	srsf1a	92	82.743	Oryzias_melastigma
ENSNLEG00000008088	-	99	98.611	ENSOGAG00000025950	-	99	100.000	Otolemur_garnettii
ENSNLEG00000008088	-	99	97.222	ENSOARG00000008323	SRSF1	99	95.122	Ovis_aries
ENSNLEG00000008088	-	100	100.000	ENSPPAG00000043403	-	100	100.000	Pan_paniscus
ENSNLEG00000008088	-	100	100.000	ENSPPRG00000004238	-	100	100.000	Panthera_pardus
ENSNLEG00000008088	-	100	100.000	ENSPTRG00000049077	SRSF1	100	100.000	Pan_troglodytes
ENSNLEG00000008088	-	100	100.000	ENSPANG00000022305	-	100	100.000	Papio_anubis
ENSNLEG00000008088	-	100	85.549	ENSPANG00000030275	-	100	85.549	Papio_anubis
ENSNLEG00000008088	-	96	95.062	ENSPKIG00000007204	srsf1a	98	95.062	Paramormyrops_kingsleyae
ENSNLEG00000008088	-	99	97.222	ENSPKIG00000012857	srsf1b	99	95.935	Paramormyrops_kingsleyae
ENSNLEG00000008088	-	88	96.732	ENSPSIG00000009000	-	100	92.000	Pelodiscus_sinensis
ENSNLEG00000008088	-	94	84.937	ENSPMGG00000005467	-	99	85.470	Periophthalmus_magnuspinnatus
ENSNLEG00000008088	-	95	89.855	ENSPMGG00000013112	-	99	85.654	Periophthalmus_magnuspinnatus
ENSNLEG00000008088	-	100	100.000	ENSPEMG00000021416	Srsf1	100	100.000	Peromyscus_maniculatus_bairdii
ENSNLEG00000008088	-	99	98.611	ENSPCIG00000006076	-	99	99.190	Phascolarctos_cinereus
ENSNLEG00000008088	-	96	82.857	ENSPFOG00000018325	-	86	85.714	Poecilia_formosa
ENSNLEG00000008088	-	96	82.857	ENSPLAG00000008416	srsf1b	98	85.714	Poecilia_latipinna
ENSNLEG00000008088	-	93	91.176	ENSPMEG00000020607	-	98	87.805	Poecilia_mexicana
ENSNLEG00000008088	-	93	91.176	ENSPMEG00000014312	-	98	87.805	Poecilia_mexicana
ENSNLEG00000008088	-	96	82.857	ENSPMEG00000002388	-	98	85.714	Poecilia_mexicana
ENSNLEG00000008088	-	95	89.855	ENSPREG00000009667	srsf1a	98	85.185	Poecilia_reticulata
ENSNLEG00000008088	-	100	100.000	ENSPPYG00000008240	SRSF1	100	100.000	Pongo_abelii
ENSNLEG00000008088	-	99	98.611	ENSPCAG00000005199	SRSF1	99	100.000	Procavia_capensis
ENSNLEG00000008088	-	100	100.000	ENSPCOG00000023654	-	100	100.000	Propithecus_coquereli
ENSNLEG00000008088	-	99	86.111	ENSPCOG00000025736	-	95	76.531	Propithecus_coquereli
ENSNLEG00000008088	-	89	100.000	ENSPVAG00000000519	-	74	100.000	Pteropus_vampyrus
ENSNLEG00000008088	-	99	97.222	ENSPNAG00000014601	srsf1b	99	94.309	Pygocentrus_nattereri
ENSNLEG00000008088	-	95	95.652	ENSPNAG00000022241	srsf1a	98	90.947	Pygocentrus_nattereri
ENSNLEG00000008088	-	99	98.611	ENSRNOG00000050323	Srsf1	99	100.000	Rattus_norvegicus
ENSNLEG00000008088	-	100	100.000	ENSRBIG00000034445	-	100	100.000	Rhinopithecus_bieti
ENSNLEG00000008088	-	100	100.000	ENSRROG00000041506	-	100	100.000	Rhinopithecus_roxellana
ENSNLEG00000008088	-	100	100.000	ENSSBOG00000025377	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSNLEG00000008088	-	99	98.611	ENSSHAG00000002552	-	99	99.190	Sarcophilus_harrisii
ENSNLEG00000008088	-	82	78.333	ENSSFOG00015001585	-	72	80.519	Scleropages_formosus
ENSNLEG00000008088	-	97	97.183	ENSSFOG00015004800	srsf1a	98	96.327	Scleropages_formosus
ENSNLEG00000008088	-	66	81.250	ENSSFOG00015010677	-	59	83.077	Scleropages_formosus
ENSNLEG00000008088	-	93	91.176	ENSSMAG00000007018	-	98	83.128	Scophthalmus_maximus
ENSNLEG00000008088	-	99	88.889	ENSSMAG00000009719	-	100	86.275	Scophthalmus_maximus
ENSNLEG00000008088	-	99	88.889	ENSSDUG00000003929	-	99	77.510	Seriola_dumerili
ENSNLEG00000008088	-	93	91.176	ENSSDUG00000011303	-	98	84.362	Seriola_dumerili
ENSNLEG00000008088	-	99	88.889	ENSSLDG00000016868	-	99	82.661	Seriola_lalandi_dorsalis
ENSNLEG00000008088	-	99	86.111	ENSSLDG00000016895	-	99	76.113	Seriola_lalandi_dorsalis
ENSNLEG00000008088	-	93	91.176	ENSSLDG00000010543	-	98	84.362	Seriola_lalandi_dorsalis
ENSNLEG00000008088	-	99	98.611	ENSSARG00000010949	-	63	100.000	Sorex_araneus
ENSNLEG00000008088	-	100	98.814	ENSSPUG00000000804	-	100	98.814	Sphenodon_punctatus
ENSNLEG00000008088	-	93	91.176	ENSSPAG00000022562	-	98	85.597	Stegastes_partitus
ENSNLEG00000008088	-	99	88.889	ENSSPAG00000014152	-	99	84.556	Stegastes_partitus
ENSNLEG00000008088	-	100	100.000	ENSSSCG00000017626	-	100	100.000	Sus_scrofa
ENSNLEG00000008088	-	88	96.732	ENSTGUG00000008416	-	100	97.283	Taeniopygia_guttata
ENSNLEG00000008088	-	93	91.176	ENSTRUG00000003691	srsf1a	98	84.362	Takifugu_rubripes
ENSNLEG00000008088	-	93	91.176	ENSTNIG00000016223	srsf1a	98	84.362	Tetraodon_nigroviridis
ENSNLEG00000008088	-	99	94.444	ENSTBEG00000015378	-	63	98.370	Tupaia_belangeri
ENSNLEG00000008088	-	88	98.693	ENSTTRG00000007310	SRSF1	100	98.907	Tursiops_truncatus
ENSNLEG00000008088	-	99	98.611	ENSUAMG00000009858	SRSF1	99	100.000	Ursus_americanus
ENSNLEG00000008088	-	100	100.000	ENSUMAG00000000455	-	100	100.000	Ursus_maritimus
ENSNLEG00000008088	-	99	98.611	ENSVPAG00000010094	SRSF1	99	99.593	Vicugna_pacos
ENSNLEG00000008088	-	100	100.000	ENSVVUG00000011882	-	100	100.000	Vulpes_vulpes
ENSNLEG00000008088	-	99	98.611	ENSXETG00000008954	srsf1	99	91.321	Xenopus_tropicalis
ENSNLEG00000008088	-	93	91.176	ENSXMAG00000011766	srsf1a	98	85.185	Xiphophorus_maculatus