EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000008293 (Gene tree)
Gene ID: 100607321
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 30262 bases
Position: chr11:119753762-119784023
Accession: 100607321
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000033156	MMR_HSR1	PF01926.23	7e-14	1	1
ENSNLEP00000010132	MMR_HSR1	PF01926.23	7.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000042129	LSG1-202	1974	-	ENSNLEP00000033156	657 (aa)	-	A0A2I3GPB4
ENSNLET00000010632	LSG1-201	3584	XM_003280418	ENSNLEP00000010132	658 (aa)	XP_003280466	G1RA85

Gene Model

Click here to download ENSNLEG00000008293's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000008293's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000008293	LSG1	100	95.897	ENSG00000041802	LSG1	100	95.897	Homo_sapiens
ENSNLEG00000008293	LSG1	99	65.303	ENSAPOG00000009694	lsg1	99	65.909	Acanthochromis_polyacanthus
ENSNLEG00000008293	LSG1	99	83.156	ENSAMEG00000009343	LSG1	99	83.156	Ailuropoda_melanoleuca
ENSNLEG00000008293	LSG1	98	64.286	ENSACIG00000012406	lsg1	99	64.947	Amphilophus_citrinellus
ENSNLEG00000008293	LSG1	99	64.848	ENSAOCG00000016066	lsg1	99	65.000	Amphiprion_ocellaris
ENSNLEG00000008293	LSG1	99	64.848	ENSAPEG00000003252	lsg1	99	64.848	Amphiprion_percula
ENSNLEG00000008293	LSG1	98	64.869	ENSATEG00000011794	lsg1	99	64.804	Anabas_testudineus
ENSNLEG00000008293	LSG1	95	64.873	ENSACAG00000004222	LSG1	99	64.184	Anolis_carolinensis
ENSNLEG00000008293	LSG1	100	94.225	ENSANAG00000021153	LSG1	100	94.225	Aotus_nancymaae
ENSNLEG00000008293	LSG1	99	64.297	ENSACLG00000000520	lsg1	99	63.678	Astatotilapia_calliptera
ENSNLEG00000008293	LSG1	99	63.284	ENSAMXG00000008271	lsg1	99	63.731	Astyanax_mexicanus
ENSNLEG00000008293	LSG1	100	84.825	ENSBTAG00000008461	LSG1	100	85.129	Bos_taurus
ENSNLEG00000008293	LSG1	69	52.041	WBGene00016907	C53H9.2	94	58.871	Caenorhabditis_elegans
ENSNLEG00000008293	LSG1	100	93.465	ENSCJAG00000013962	LSG1	100	93.465	Callithrix_jacchus
ENSNLEG00000008293	LSG1	95	85.440	ENSCAFG00000013445	LSG1	99	85.440	Canis_familiaris
ENSNLEG00000008293	LSG1	99	83.964	ENSCAFG00020002216	LSG1	99	85.072	Canis_lupus_dingo
ENSNLEG00000008293	LSG1	99	84.498	ENSCHIG00000015769	LSG1	99	84.498	Capra_hircus
ENSNLEG00000008293	LSG1	100	89.074	ENSTSYG00000001447	LSG1	100	89.074	Carlito_syrichta
ENSNLEG00000008293	LSG1	95	76.752	ENSCAPG00000009856	LSG1	100	75.637	Cavia_aperea
ENSNLEG00000008293	LSG1	100	92.553	ENSCCAG00000035744	LSG1	100	92.553	Cebus_capucinus
ENSNLEG00000008293	LSG1	100	96.049	ENSCATG00000042060	LSG1	100	95.434	Cercocebus_atys
ENSNLEG00000008293	LSG1	100	96.809	ENSCSAG00000008796	LSG1	92	96.809	Chlorocebus_sabaeus
ENSNLEG00000008293	LSG1	99	69.115	ENSCPBG00000015941	LSG1	83	69.715	Chrysemys_picta_bellii
ENSNLEG00000008293	LSG1	74	63.158	ENSCING00000007079	-	99	63.158	Ciona_intestinalis
ENSNLEG00000008293	LSG1	75	55.967	ENSCSAVG00000002514	-	96	55.967	Ciona_savignyi
ENSNLEG00000008293	LSG1	100	96.353	ENSCANG00000030709	LSG1	100	96.353	Colobus_angolensis_palliatus
ENSNLEG00000008293	LSG1	100	82.424	ENSCGRG00001019846	Lsg1	100	82.576	Cricetulus_griseus_chok1gshd
ENSNLEG00000008293	LSG1	100	82.424	ENSCGRG00000014617	Lsg1	100	82.576	Cricetulus_griseus_crigri
ENSNLEG00000008293	LSG1	98	65.077	ENSCSEG00000008522	lsg1	99	64.103	Cynoglossus_semilaevis
ENSNLEG00000008293	LSG1	97	66.199	ENSCVAG00000002484	lsg1	99	66.717	Cyprinodon_variegatus
ENSNLEG00000008293	LSG1	99	67.173	ENSDARG00000015352	lsg1	99	67.021	Danio_rerio
ENSNLEG00000008293	LSG1	100	85.498	ENSDNOG00000006224	LSG1	100	85.196	Dasypus_novemcinctus
ENSNLEG00000008293	LSG1	84	57.787	FBgn0266284	Ns3	93	56.031	Drosophila_melanogaster
ENSNLEG00000008293	LSG1	89	86.667	ENSETEG00000003888	LSG1	89	86.667	Echinops_telfairi
ENSNLEG00000008293	LSG1	88	58.081	ENSEBUG00000003119	lsg1	85	56.882	Eptatretus_burgeri
ENSNLEG00000008293	LSG1	100	86.950	ENSEASG00005000678	LSG1	100	86.950	Equus_asinus_asinus
ENSNLEG00000008293	LSG1	100	87.253	ENSECAG00000017659	LSG1	100	87.253	Equus_caballus
ENSNLEG00000008293	LSG1	87	83.621	ENSEEUG00000015217	LSG1	87	83.621	Erinaceus_europaeus
ENSNLEG00000008293	LSG1	99	62.632	ENSELUG00000023973	lsg1	99	62.027	Esox_lucius
ENSNLEG00000008293	LSG1	99	86.018	ENSFCAG00000024957	LSG1	99	86.018	Felis_catus
ENSNLEG00000008293	LSG1	92	66.558	ENSFALG00000007210	LSG1	94	66.558	Ficedula_albicollis
ENSNLEG00000008293	LSG1	100	78.431	ENSFDAG00000017373	LSG1	100	78.431	Fukomys_damarensis
ENSNLEG00000008293	LSG1	97	65.217	ENSFHEG00000003680	lsg1	99	65.165	Fundulus_heteroclitus
ENSNLEG00000008293	LSG1	81	72.689	ENSGMOG00000015834	lsg1	99	60.725	Gadus_morhua
ENSNLEG00000008293	LSG1	99	63.690	ENSGALG00000007058	LSG1	87	63.514	Gallus_gallus
ENSNLEG00000008293	LSG1	97	65.835	ENSGAFG00000015831	lsg1	99	65.753	Gambusia_affinis
ENSNLEG00000008293	LSG1	98	63.623	ENSGACG00000009323	lsg1	99	62.985	Gasterosteus_aculeatus
ENSNLEG00000008293	LSG1	100	96.499	ENSGGOG00000000520	LSG1	100	96.499	Gorilla_gorilla
ENSNLEG00000008293	LSG1	99	63.952	ENSHBUG00000005659	lsg1	99	64.134	Haplochromis_burtoni
ENSNLEG00000008293	LSG1	100	76.621	ENSHGLG00000017390	LSG1	100	77.225	Heterocephalus_glaber_female
ENSNLEG00000008293	LSG1	100	76.621	ENSHGLG00100018587	LSG1	100	77.225	Heterocephalus_glaber_male
ENSNLEG00000008293	LSG1	97	64.297	ENSHCOG00000016848	lsg1	99	62.003	Hippocampus_comes
ENSNLEG00000008293	LSG1	99	65.455	ENSIPUG00000008631	lsg1	99	65.303	Ictalurus_punctatus
ENSNLEG00000008293	LSG1	82	79.249	ENSSTOG00000010234	LSG1	99	81.836	Ictidomys_tridecemlineatus
ENSNLEG00000008293	LSG1	100	81.571	ENSJJAG00000015513	Lsg1	100	81.571	Jaculus_jaculus
ENSNLEG00000008293	LSG1	98	63.876	ENSKMAG00000009681	lsg1	99	63.526	Kryptolebias_marmoratus
ENSNLEG00000008293	LSG1	98	63.199	ENSLBEG00000024261	lsg1	99	63.318	Labrus_bergylta
ENSNLEG00000008293	LSG1	99	65.817	ENSLACG00000013399	LSG1	99	65.817	Latimeria_chalumnae
ENSNLEG00000008293	LSG1	98	66.924	ENSLOCG00000004918	lsg1	99	66.063	Lepisosteus_oculatus
ENSNLEG00000008293	LSG1	100	83.915	ENSLAFG00000012919	-	100	83.915	Loxodonta_africana
ENSNLEG00000008293	LSG1	100	96.657	ENSMFAG00000039903	LSG1	100	96.043	Macaca_fascicularis
ENSNLEG00000008293	LSG1	100	96.809	ENSMMUG00000010708	LSG1	100	96.809	Macaca_mulatta
ENSNLEG00000008293	LSG1	100	96.505	ENSMNEG00000031538	LSG1	100	95.738	Macaca_nemestrina
ENSNLEG00000008293	LSG1	100	96.505	ENSMLEG00000041184	LSG1	100	96.505	Mandrillus_leucophaeus
ENSNLEG00000008293	LSG1	99	62.424	ENSMAMG00000000470	lsg1	99	62.121	Mastacembelus_armatus
ENSNLEG00000008293	LSG1	99	63.922	ENSMZEG00005017865	lsg1	99	64.145	Maylandia_zebra
ENSNLEG00000008293	LSG1	89	66.780	ENSMGAG00000007050	LSG1	99	65.709	Meleagris_gallopavo
ENSNLEG00000008293	LSG1	91	80.431	ENSMAUG00000016976	Lsg1	93	81.095	Mesocricetus_auratus
ENSNLEG00000008293	LSG1	100	86.646	ENSMICG00000049087	LSG1	100	86.646	Microcebus_murinus
ENSNLEG00000008293	LSG1	100	80.665	ENSMOCG00000022136	Lsg1	100	80.363	Microtus_ochrogaster
ENSNLEG00000008293	LSG1	83	73.510	ENSMMOG00000008884	lsg1	99	73.510	Mola_mola
ENSNLEG00000008293	LSG1	99	59.879	ENSMODG00000019828	LSG1	99	59.009	Monodelphis_domestica
ENSNLEG00000008293	LSG1	100	82.067	MGP_CAROLIEiJ_G0020648	Lsg1	100	82.094	Mus_caroli
ENSNLEG00000008293	LSG1	100	82.219	ENSMUSG00000022538	Lsg1	100	82.246	Mus_musculus
ENSNLEG00000008293	LSG1	98	82.407	MGP_PahariEiJ_G0016352	Lsg1	100	83.030	Mus_pahari
ENSNLEG00000008293	LSG1	100	82.219	MGP_SPRETEiJ_G0021544	Lsg1	100	82.246	Mus_spretus
ENSNLEG00000008293	LSG1	99	84.498	ENSMPUG00000003734	LSG1	99	84.498	Mustela_putorius_furo
ENSNLEG00000008293	LSG1	99	86.343	ENSMLUG00000012548	LSG1	99	86.343	Myotis_lucifugus
ENSNLEG00000008293	LSG1	100	81.791	ENSNGAG00000021872	Lsg1	100	80.425	Nannospalax_galili
ENSNLEG00000008293	LSG1	69	69.774	ENSMEUG00000009041	-	82	69.706	Notamacropus_eugenii
ENSNLEG00000008293	LSG1	99	63.952	ENSONIG00000002635	lsg1	99	63.868	Oreochromis_niloticus
ENSNLEG00000008293	LSG1	95	72.887	ENSOANG00000012742	LSG1	99	71.930	Ornithorhynchus_anatinus
ENSNLEG00000008293	LSG1	100	86.343	ENSOCUG00000004817	LSG1	100	86.343	Oryctolagus_cuniculus
ENSNLEG00000008293	LSG1	98	63.975	ENSORLG00000007695	lsg1	99	64.384	Oryzias_latipes
ENSNLEG00000008293	LSG1	98	63.876	ENSORLG00020016286	lsg1	99	63.775	Oryzias_latipes_hni
ENSNLEG00000008293	LSG1	98	64.596	ENSORLG00015012025	lsg1	99	64.231	Oryzias_latipes_hsok
ENSNLEG00000008293	LSG1	98	62.791	ENSOMEG00000022379	lsg1	99	62.918	Oryzias_melastigma
ENSNLEG00000008293	LSG1	100	86.707	ENSOGAG00000003475	LSG1	100	86.707	Otolemur_garnettii
ENSNLEG00000008293	LSG1	99	84.219	ENSOARG00000020403	LSG1	99	83.612	Ovis_aries
ENSNLEG00000008293	LSG1	100	95.586	ENSPPAG00000029271	LSG1	100	95.586	Pan_paniscus
ENSNLEG00000008293	LSG1	99	85.564	ENSPPRG00000010281	LSG1	99	85.564	Panthera_pardus
ENSNLEG00000008293	LSG1	99	86.322	ENSPTIG00000010789	LSG1	99	86.322	Panthera_tigris_altaica
ENSNLEG00000008293	LSG1	100	95.586	ENSPTRG00000015760	LSG1	100	95.586	Pan_troglodytes
ENSNLEG00000008293	LSG1	100	96.353	ENSPANG00000018249	LSG1	100	95.738	Papio_anubis
ENSNLEG00000008293	LSG1	96	65.312	ENSPKIG00000002895	lsg1	100	64.060	Paramormyrops_kingsleyae
ENSNLEG00000008293	LSG1	96	65.732	ENSPSIG00000009821	LSG1	99	65.109	Pelodiscus_sinensis
ENSNLEG00000008293	LSG1	95	64.968	ENSPMGG00000000931	lsg1	99	64.547	Periophthalmus_magnuspinnatus
ENSNLEG00000008293	LSG1	100	82.477	ENSPEMG00000012082	-	100	82.175	Peromyscus_maniculatus_bairdii
ENSNLEG00000008293	LSG1	99	59.912	ENSPMAG00000007451	lsg1	99	59.618	Petromyzon_marinus
ENSNLEG00000008293	LSG1	99	68.394	ENSPCIG00000013890	LSG1	82	68.394	Phascolarctos_cinereus
ENSNLEG00000008293	LSG1	97	65.538	ENSPFOG00000021882	lsg1	99	65.663	Poecilia_formosa
ENSNLEG00000008293	LSG1	97	64.651	ENSPLAG00000019536	lsg1	99	65.315	Poecilia_latipinna
ENSNLEG00000008293	LSG1	97	64.724	ENSPMEG00000017281	lsg1	99	64.865	Poecilia_mexicana
ENSNLEG00000008293	LSG1	97	55.183	ENSPREG00000006048	lsg1	99	55.621	Poecilia_reticulata
ENSNLEG00000008293	LSG1	92	95.222	ENSPPYG00000014425	LSG1	100	94.234	Pongo_abelii
ENSNLEG00000008293	LSG1	91	85.333	ENSPCAG00000005511	LSG1	90	85.333	Procavia_capensis
ENSNLEG00000008293	LSG1	100	88.467	ENSPCOG00000012360	LSG1	100	88.467	Propithecus_coquereli
ENSNLEG00000008293	LSG1	99	64.145	ENSPNYG00000021994	lsg1	99	63.526	Pundamilia_nyererei
ENSNLEG00000008293	LSG1	99	66.767	ENSPNAG00000015533	lsg1	99	66.516	Pygocentrus_nattereri
ENSNLEG00000008293	LSG1	100	82.504	ENSRNOG00000001727	Lsg1	100	82.504	Rattus_norvegicus
ENSNLEG00000008293	LSG1	100	95.745	ENSRBIG00000029053	LSG1	100	95.745	Rhinopithecus_bieti
ENSNLEG00000008293	LSG1	100	95.745	ENSRROG00000037702	LSG1	100	95.745	Rhinopithecus_roxellana
ENSNLEG00000008293	LSG1	66	57.485	YGL099W	LSG1	68	57.485	Saccharomyces_cerevisiae
ENSNLEG00000008293	LSG1	100	93.921	ENSSBOG00000034938	LSG1	100	93.921	Saimiri_boliviensis_boliviensis
ENSNLEG00000008293	LSG1	79	67.429	ENSSHAG00000003487	LSG1	99	66.793	Sarcophilus_harrisii
ENSNLEG00000008293	LSG1	98	65.015	ENSSFOG00015008955	lsg1	99	63.568	Scleropages_formosus
ENSNLEG00000008293	LSG1	98	64.869	ENSSDUG00000004622	lsg1	99	64.902	Seriola_dumerili
ENSNLEG00000008293	LSG1	98	64.907	ENSSLDG00000010869	lsg1	99	64.536	Seriola_lalandi_dorsalis
ENSNLEG00000008293	LSG1	81	84.118	ENSSARG00000012981	LSG1	81	84.118	Sorex_araneus
ENSNLEG00000008293	LSG1	99	67.411	ENSSPUG00000016347	LSG1	99	67.463	Sphenodon_punctatus
ENSNLEG00000008293	LSG1	99	62.879	ENSSPAG00000005508	lsg1	99	62.784	Stegastes_partitus
ENSNLEG00000008293	LSG1	99	84.347	ENSSSCG00000011827	LSG1	99	83.587	Sus_scrofa
ENSNLEG00000008293	LSG1	89	65.546	ENSTGUG00000009068	LSG1	99	65.042	Taeniopygia_guttata
ENSNLEG00000008293	LSG1	97	61.778	ENSTRUG00000017380	lsg1	99	61.187	Takifugu_rubripes
ENSNLEG00000008293	LSG1	97	64.043	ENSTNIG00000015570	lsg1	99	63.897	Tetraodon_nigroviridis
ENSNLEG00000008293	LSG1	99	77.542	ENSTTRG00000000559	LSG1	99	76.631	Tursiops_truncatus
ENSNLEG00000008293	LSG1	99	84.347	ENSUAMG00000012454	LSG1	99	84.347	Ursus_americanus
ENSNLEG00000008293	LSG1	99	84.347	ENSUMAG00000000855	LSG1	99	84.347	Ursus_maritimus
ENSNLEG00000008293	LSG1	95	81.440	ENSVPAG00000012400	LSG1	99	81.440	Vicugna_pacos
ENSNLEG00000008293	LSG1	95	84.320	ENSVVUG00000008956	LSG1	97	84.320	Vulpes_vulpes
ENSNLEG00000008293	LSG1	99	65.865	ENSXETG00000003451	lsg1	99	66.052	Xenopus_tropicalis
ENSNLEG00000008293	LSG1	97	64.961	ENSXCOG00000003239	lsg1	99	64.511	Xiphophorus_couchianus
ENSNLEG00000008293	LSG1	97	64.907	ENSXMAG00000005536	lsg1	99	64.458	Xiphophorus_maculatus