EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000008622 (Gene tree)
Gene ID: 100601277
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 141918 bases
Position: chr20:16447075-16588992
Accession: 100601277
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000032741	R3H	PF01424.22	2.4e-11	1	1
ENSNLEP00000024855	R3H	PF01424.22	2.7e-11	1	1
ENSNLEP00000010571	R3H	PF01424.22	2.9e-11	1	1
ENSNLEP00000032762	R3H	PF01424.22	2.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000047983	R3HDM1-204	3303	-	ENSNLEP00000032762	1100 (aa)	-	A0A2I3GND2
ENSNLET00000051888	R3HDM1-205	1371	-	ENSNLEP00000034455	456 (aa)	-	A0A2I3GT91
ENSNLET00000046701	R3HDM1-206	1281	-	ENSNLEP00000048812	426 (aa)	-	A0A2I3HZ82
ENSNLET00000011087	R3HDM1-201	4792	XM_003267601	ENSNLEP00000010571	1100 (aa)	XP_003267649	G1RBH4
ENSNLET00000059723	R3HDM1-202	4376	XM_003267603	ENSNLEP00000024855	1044 (aa)	XP_003267651	A0A2I3FSW8
ENSNLET00000050322	R3HDM1-203	3899	XM_012502532	ENSNLEP00000032741	971 (aa)	XP_012357986	A0A2I3GN51

Gene Model

Click here to download ENSNLEG00000008622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000008622's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000008622	R3HDM1	99	50.099	ENSNLEG00000017351	R3HDM2	95	57.908
ENSNLEG00000008622	R3HDM1	65	58.726	ENSNLEG00000004823	ARPP21	84	58.904

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000008622	R3HDM1	100	99.425	ENSG00000048991	R3HDM1	100	99.425	Homo_sapiens
ENSNLEG00000008622	R3HDM1	88	63.467	ENSAPOG00000020850	r3hdm1	90	59.656	Acanthochromis_polyacanthus
ENSNLEG00000008622	R3HDM1	100	94.832	ENSAMEG00000014886	R3HDM1	100	95.014	Ailuropoda_melanoleuca
ENSNLEG00000008622	R3HDM1	87	58.088	ENSAOCG00000005192	r3hdm1	93	59.656	Amphiprion_ocellaris
ENSNLEG00000008622	R3HDM1	87	63.200	ENSAPEG00000016108	r3hdm1	95	63.200	Amphiprion_percula
ENSNLEG00000008622	R3HDM1	87	63.441	ENSATEG00000000232	r3hdm1	87	64.010	Anabas_testudineus
ENSNLEG00000008622	R3HDM1	100	78.771	ENSAPLG00000015231	R3HDM1	100	79.042	Anas_platyrhynchos
ENSNLEG00000008622	R3HDM1	100	76.465	ENSACAG00000001676	R3HDM1	100	76.640	Anolis_carolinensis
ENSNLEG00000008622	R3HDM1	100	98.278	ENSANAG00000035334	R3HDM1	100	98.278	Aotus_nancymaae
ENSNLEG00000008622	R3HDM1	87	62.133	ENSACLG00000027282	r3hdm1	94	62.133	Astatotilapia_calliptera
ENSNLEG00000008622	R3HDM1	89	78.571	ENSAMXG00000012861	R3HDM1	100	61.018	Astyanax_mexicanus
ENSNLEG00000008622	R3HDM1	88	74.684	ENSAMXG00000003536	r3hdm1	89	74.603	Astyanax_mexicanus
ENSNLEG00000008622	R3HDM1	60	40.490	ENSAMXG00000020587	arpp21	82	38.959	Astyanax_mexicanus
ENSNLEG00000008622	R3HDM1	100	92.671	ENSBTAG00000013302	R3HDM1	100	91.293	Bos_taurus
ENSNLEG00000008622	R3HDM1	100	98.000	ENSCJAG00000011718	R3HDM1	100	98.000	Callithrix_jacchus
ENSNLEG00000008622	R3HDM1	100	95.014	ENSCAFG00000005075	R3HDM1	100	95.195	Canis_familiaris
ENSNLEG00000008622	R3HDM1	100	95.558	ENSCAFG00020016119	R3HDM1	100	95.648	Canis_lupus_dingo
ENSNLEG00000008622	R3HDM1	100	93.744	ENSCHIG00000020851	R3HDM1	100	93.926	Capra_hircus
ENSNLEG00000008622	R3HDM1	100	89.104	ENSCPOG00000012784	R3HDM1	100	94.093	Cavia_porcellus
ENSNLEG00000008622	R3HDM1	100	98.180	ENSCCAG00000027199	R3HDM1	100	98.180	Cebus_capucinus
ENSNLEG00000008622	R3HDM1	100	99.077	ENSCATG00000023642	R3HDM1	100	98.818	Cercocebus_atys
ENSNLEG00000008622	R3HDM1	100	88.918	ENSCLAG00000007962	R3HDM1	94	95.861	Chinchilla_lanigera
ENSNLEG00000008622	R3HDM1	100	95.855	ENSCSAG00000016356	R3HDM1	100	95.855	Chlorocebus_sabaeus
ENSNLEG00000008622	R3HDM1	80	93.939	ENSCHOG00000013638	R3HDM1	81	94.118	Choloepus_hoffmanni
ENSNLEG00000008622	R3HDM1	91	91.144	ENSCPBG00000009645	R3HDM1	100	91.144	Chrysemys_picta_bellii
ENSNLEG00000008622	R3HDM1	100	98.638	ENSCANG00000034748	R3HDM1	100	98.638	Colobus_angolensis_palliatus
ENSNLEG00000008622	R3HDM1	99	88.614	ENSCGRG00001012357	R3hdm1	97	88.614	Cricetulus_griseus_chok1gshd
ENSNLEG00000008622	R3HDM1	99	91.182	ENSCGRG00000012080	R3hdm1	100	90.365	Cricetulus_griseus_crigri
ENSNLEG00000008622	R3HDM1	81	65.246	ENSCSEG00000008944	r3hdm1	82	65.246	Cynoglossus_semilaevis
ENSNLEG00000008622	R3HDM1	87	61.067	ENSCVAG00000007582	r3hdm1	91	61.067	Cyprinodon_variegatus
ENSNLEG00000008622	R3HDM1	64	36.218	ENSDARG00000061081	arpp21	95	34.904	Danio_rerio
ENSNLEG00000008622	R3HDM1	100	91.368	ENSDNOG00000000771	R3HDM1	100	90.721	Dasypus_novemcinctus
ENSNLEG00000008622	R3HDM1	100	83.137	ENSETEG00000013606	R3HDM1	100	83.681	Echinops_telfairi
ENSNLEG00000008622	R3HDM1	60	47.606	ENSEBUG00000014746	arpp21	97	43.546	Eptatretus_burgeri
ENSNLEG00000008622	R3HDM1	100	97.514	ENSEASG00005007392	R3HDM1	100	95.104	Equus_asinus_asinus
ENSNLEG00000008622	R3HDM1	99	97.514	ENSECAG00000019114	R3HDM1	100	95.376	Equus_caballus
ENSNLEG00000008622	R3HDM1	91	86.876	ENSEEUG00000012589	R3HDM1	91	86.876	Erinaceus_europaeus
ENSNLEG00000008622	R3HDM1	92	52.581	ENSELUG00000014413	r3hdm1	87	78.339	Esox_lucius
ENSNLEG00000008622	R3HDM1	83	78.387	ENSELUG00000004909	R3HDM1	99	55.844	Esox_lucius
ENSNLEG00000008622	R3HDM1	100	97.238	ENSFCAG00000027113	R3HDM1	100	94.651	Felis_catus
ENSNLEG00000008622	R3HDM1	75	73.077	ENSFALG00000013731	R3HDM1	93	66.068	Ficedula_albicollis
ENSNLEG00000008622	R3HDM1	100	88.576	ENSFDAG00000016478	R3HDM1	94	95.643	Fukomys_damarensis
ENSNLEG00000008622	R3HDM1	87	57.108	ENSFHEG00000018713	r3hdm1	100	47.790	Fundulus_heteroclitus
ENSNLEG00000008622	R3HDM1	61	64.565	ENSGMOG00000006042	-	74	65.000	Gadus_morhua
ENSNLEG00000008622	R3HDM1	94	77.681	ENSGALG00000012246	R3HDM1	99	85.902	Gallus_gallus
ENSNLEG00000008622	R3HDM1	87	61.333	ENSGAFG00000006203	r3hdm1	95	61.333	Gambusia_affinis
ENSNLEG00000008622	R3HDM1	86	68.269	ENSGACG00000014925	r3hdm1	92	68.269	Gasterosteus_aculeatus
ENSNLEG00000008622	R3HDM1	99	83.380	ENSGAGG00000007840	R3HDM1	100	78.462	Gopherus_agassizii
ENSNLEG00000008622	R3HDM1	100	99.234	ENSGGOG00000008156	R3HDM1	100	99.234	Gorilla_gorilla
ENSNLEG00000008622	R3HDM1	100	89.437	ENSHGLG00000015718	R3HDM1	94	95.861	Heterocephalus_glaber_female
ENSNLEG00000008622	R3HDM1	100	88.820	ENSHGLG00100003184	-	94	95.861	Heterocephalus_glaber_male
ENSNLEG00000008622	R3HDM1	100	69.175	ENSHGLG00100015374	-	100	73.652	Heterocephalus_glaber_male
ENSNLEG00000008622	R3HDM1	87	59.786	ENSHCOG00000013366	r3hdm1	91	60.590	Hippocampus_comes
ENSNLEG00000008622	R3HDM1	87	68.365	ENSIPUG00000001676	R3HDM1	98	58.842	Ictalurus_punctatus
ENSNLEG00000008622	R3HDM1	89	68.615	ENSIPUG00000013629	r3hdm1	94	70.288	Ictalurus_punctatus
ENSNLEG00000008622	R3HDM1	53	37.876	ENSIPUG00000020552	arpp21	51	39.674	Ictalurus_punctatus
ENSNLEG00000008622	R3HDM1	100	95.277	ENSSTOG00000007572	R3HDM1	100	96.296	Ictidomys_tridecemlineatus
ENSNLEG00000008622	R3HDM1	94	85.806	ENSLACG00000005334	R3HDM1	100	71.117	Latimeria_chalumnae
ENSNLEG00000008622	R3HDM1	100	66.608	ENSLOCG00000001641	r3hdm1	100	66.548	Lepisosteus_oculatus
ENSNLEG00000008622	R3HDM1	100	90.757	ENSLAFG00000009065	R3HDM1	100	90.933	Loxodonta_africana
ENSNLEG00000008622	R3HDM1	100	99.000	ENSMFAG00000030331	R3HDM1	100	99.507	Macaca_fascicularis
ENSNLEG00000008622	R3HDM1	100	98.818	ENSMMUG00000009844	R3HDM1	100	98.818	Macaca_mulatta
ENSNLEG00000008622	R3HDM1	100	98.818	ENSMNEG00000027793	R3HDM1	100	99.507	Macaca_nemestrina
ENSNLEG00000008622	R3HDM1	100	99.091	ENSMLEG00000043189	R3HDM1	100	99.091	Mandrillus_leucophaeus
ENSNLEG00000008622	R3HDM1	87	62.466	ENSMAMG00000004532	r3hdm1	93	59.004	Mastacembelus_armatus
ENSNLEG00000008622	R3HDM1	87	62.133	ENSMZEG00005003157	r3hdm1	95	57.353	Maylandia_zebra
ENSNLEG00000008622	R3HDM1	100	78.320	ENSMGAG00000012461	R3HDM1	100	78.500	Meleagris_gallopavo
ENSNLEG00000008622	R3HDM1	100	88.158	ENSMAUG00000010315	R3hdm1	100	90.698	Mesocricetus_auratus
ENSNLEG00000008622	R3HDM1	100	94.280	ENSMICG00000005900	-	100	94.280	Microcebus_murinus
ENSNLEG00000008622	R3HDM1	95	92.424	ENSMICG00000042655	-	100	92.424	Microcebus_murinus
ENSNLEG00000008622	R3HDM1	90	77.471	ENSMODG00000000923	R3HDM1	97	77.662	Monodelphis_domestica
ENSNLEG00000008622	R3HDM1	99	58.065	ENSMALG00000009000	r3hdm1	91	58.065	Monopterus_albus
ENSNLEG00000008622	R3HDM1	100	87.412	MGP_CAROLIEiJ_G0014543	R3hdm1	100	93.724	Mus_caroli
ENSNLEG00000008622	R3HDM1	100	87.412	ENSMUSG00000056211	R3hdm1	100	93.724	Mus_musculus
ENSNLEG00000008622	R3HDM1	100	87.324	MGP_PahariEiJ_G0027779	R3hdm1	100	93.724	Mus_pahari
ENSNLEG00000008622	R3HDM1	100	87.588	MGP_SPRETEiJ_G0015350	R3hdm1	100	93.724	Mus_spretus
ENSNLEG00000008622	R3HDM1	100	94.470	ENSMPUG00000002412	R3HDM1	100	94.651	Mustela_putorius_furo
ENSNLEG00000008622	R3HDM1	100	92.767	ENSMLUG00000013824	R3HDM1	100	92.767	Myotis_lucifugus
ENSNLEG00000008622	R3HDM1	89	72.607	ENSMEUG00000011784	R3HDM1	100	72.737	Notamacropus_eugenii
ENSNLEG00000008622	R3HDM1	100	88.292	ENSODEG00000008607	R3HDM1	94	96.296	Octodon_degus
ENSNLEG00000008622	R3HDM1	94	66.873	ENSONIG00000012017	r3hdm1	91	66.873	Oreochromis_niloticus
ENSNLEG00000008622	R3HDM1	100	81.605	ENSOANG00000007987	R3HDM1	100	81.876	Ornithorhynchus_anatinus
ENSNLEG00000008622	R3HDM1	89	93.496	ENSOCUG00000017366	R3HDM1	98	93.902	Oryctolagus_cuniculus
ENSNLEG00000008622	R3HDM1	87	60.638	ENSORLG00000004297	r3hdm1	90	60.638	Oryzias_latipes
ENSNLEG00000008622	R3HDM1	89	61.067	ENSORLG00015017355	r3hdm1	91	61.067	Oryzias_latipes_hsok
ENSNLEG00000008622	R3HDM1	100	93.291	ENSOGAG00000003136	R3HDM1	100	93.291	Otolemur_garnettii
ENSNLEG00000008622	R3HDM1	100	93.563	ENSOARG00000010788	R3HDM1	100	93.744	Ovis_aries
ENSNLEG00000008622	R3HDM1	100	99.235	ENSPPAG00000027858	R3HDM1	100	99.235	Pan_paniscus
ENSNLEG00000008622	R3HDM1	100	94.251	ENSPPRG00000002626	R3HDM1	100	94.379	Panthera_pardus
ENSNLEG00000008622	R3HDM1	100	94.251	ENSPTIG00000016581	R3HDM1	100	94.379	Panthera_tigris_altaica
ENSNLEG00000008622	R3HDM1	100	99.235	ENSPTRG00000012494	R3HDM1	100	99.235	Pan_troglodytes
ENSNLEG00000008622	R3HDM1	100	99.000	ENSPANG00000026448	R3HDM1	100	99.000	Papio_anubis
ENSNLEG00000008622	R3HDM1	94	76.358	ENSPKIG00000004328	r3hdm1	91	76.677	Paramormyrops_kingsleyae
ENSNLEG00000008622	R3HDM1	100	78.933	ENSPSIG00000012915	R3HDM1	100	79.204	Pelodiscus_sinensis
ENSNLEG00000008622	R3HDM1	100	88.644	ENSPEMG00000015187	R3hdm1	100	90.365	Peromyscus_maniculatus_bairdii
ENSNLEG00000008622	R3HDM1	91	52.696	ENSPMAG00000003369	-	99	43.188	Petromyzon_marinus
ENSNLEG00000008622	R3HDM1	100	90.385	ENSPCIG00000002491	R3HDM1	100	84.324	Phascolarctos_cinereus
ENSNLEG00000008622	R3HDM1	81	67.532	ENSPFOG00000015036	r3hdm1	85	67.532	Poecilia_formosa
ENSNLEG00000008622	R3HDM1	87	59.626	ENSPLAG00000018042	r3hdm1	91	59.626	Poecilia_latipinna
ENSNLEG00000008622	R3HDM1	87	59.626	ENSPMEG00000023947	r3hdm1	91	59.626	Poecilia_mexicana
ENSNLEG00000008622	R3HDM1	81	68.608	ENSPREG00000007902	r3hdm1	94	60.000	Poecilia_reticulata
ENSNLEG00000008622	R3HDM1	100	98.854	ENSPPYG00000012815	R3HDM1	100	98.183	Pongo_abelii
ENSNLEG00000008622	R3HDM1	100	82.230	ENSPCAG00000006208	R3HDM1	100	81.596	Procavia_capensis
ENSNLEG00000008622	R3HDM1	100	94.300	ENSPCOG00000012698	R3HDM1	100	94.300	Propithecus_coquereli
ENSNLEG00000008622	R3HDM1	100	85.688	ENSPVAG00000006098	R3HDM1	100	85.688	Pteropus_vampyrus
ENSNLEG00000008622	R3HDM1	94	74.522	ENSPNAG00000013952	r3hdm1	95	58.387	Pygocentrus_nattereri
ENSNLEG00000008622	R3HDM1	88	76.603	ENSPNAG00000005436	R3HDM1	99	76.527	Pygocentrus_nattereri
ENSNLEG00000008622	R3HDM1	67	38.627	ENSPNAG00000004162	arpp21	58	50.129	Pygocentrus_nattereri
ENSNLEG00000008622	R3HDM1	100	87.236	ENSRNOG00000004099	R3hdm1	100	87.236	Rattus_norvegicus
ENSNLEG00000008622	R3HDM1	100	98.206	ENSRBIG00000033317	R3HDM1	100	99.631	Rhinopithecus_bieti
ENSNLEG00000008622	R3HDM1	100	98.895	ENSRROG00000034534	R3HDM1	100	98.663	Rhinopithecus_roxellana
ENSNLEG00000008622	R3HDM1	100	97.636	ENSSBOG00000020389	R3HDM1	100	97.636	Saimiri_boliviensis_boliviensis
ENSNLEG00000008622	R3HDM1	100	84.072	ENSSHAG00000016999	R3HDM1	100	84.253	Sarcophilus_harrisii
ENSNLEG00000008622	R3HDM1	100	56.927	ENSSFOG00015019851	-	100	56.750	Scleropages_formosus
ENSNLEG00000008622	R3HDM1	100	72.162	ENSSFOG00015014134	r3hdm1	100	70.773	Scleropages_formosus
ENSNLEG00000008622	R3HDM1	99	60.541	ENSSMAG00000001669	r3hdm1	99	44.606	Scophthalmus_maximus
ENSNLEG00000008622	R3HDM1	87	62.766	ENSSDUG00000010749	r3hdm1	91	62.766	Seriola_dumerili
ENSNLEG00000008622	R3HDM1	92	69.231	ENSSLDG00000004499	r3hdm1	91	57.457	Seriola_lalandi_dorsalis
ENSNLEG00000008622	R3HDM1	74	79.565	ENSSARG00000000352	-	69	82.060	Sorex_araneus
ENSNLEG00000008622	R3HDM1	100	80.217	ENSSPUG00000004167	R3HDM1	100	80.307	Sphenodon_punctatus
ENSNLEG00000008622	R3HDM1	87	63.467	ENSSPAG00000004648	r3hdm1	91	63.467	Stegastes_partitus
ENSNLEG00000008622	R3HDM1	100	96.685	ENSSSCG00000015692	R3HDM1	100	94.923	Sus_scrofa
ENSNLEG00000008622	R3HDM1	100	73.713	ENSTGUG00000011750	R3HDM1	100	73.442	Taeniopygia_guttata
ENSNLEG00000008622	R3HDM1	81	67.208	ENSTRUG00000011654	r3hdm1	84	67.208	Takifugu_rubripes
ENSNLEG00000008622	R3HDM1	82	67.412	ENSTNIG00000010362	r3hdm1	99	45.274	Tetraodon_nigroviridis
ENSNLEG00000008622	R3HDM1	100	87.568	ENSTTRG00000003935	R3HDM1	100	87.942	Tursiops_truncatus
ENSNLEG00000008622	R3HDM1	70	96.521	ENSUAMG00000024806	R3HDM1	93	96.521	Ursus_americanus
ENSNLEG00000008622	R3HDM1	100	93.943	ENSUMAG00000005552	R3HDM1	100	94.045	Ursus_maritimus
ENSNLEG00000008622	R3HDM1	97	94.485	ENSVPAG00000007333	R3HDM1	93	89.990	Vicugna_pacos
ENSNLEG00000008622	R3HDM1	100	97.238	ENSVVUG00000006457	R3HDM1	100	91.894	Vulpes_vulpes
ENSNLEG00000008622	R3HDM1	90	67.472	ENSXETG00000019330	r3hdm1	100	67.271	Xenopus_tropicalis
ENSNLEG00000008622	R3HDM1	71	50.064	ENSXCOG00000017448	r3hdm1	94	50.323	Xiphophorus_couchianus
ENSNLEG00000008622	R3HDM1	81	68.285	ENSXMAG00000007885	r3hdm1	88	61.600	Xiphophorus_maculatus