EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000008891 (Gene tree)
Gene ID: 100588545
Gene Symbol: RCL1
Alias: RNAC|RPCL1
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 71505 bases
Position: chr1a:5677133-5748637
Accession: 100588545
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000010840	RTC	PF01137.21	2.5e-56	1	1
ENSNLEP00000025016	RTC	PF01137.21	7.7e-34	1	1
ENSNLEP00000010840	RTC_insert	PF05189.13	8.6e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000043433	RCL1-202	525	-	ENSNLEP00000025016	174 (aa)	-	A0A2I3FU82
ENSNLET00000011369	RCL1-201	1098	XM_003273884	ENSNLEP00000010840	365 (aa)	XP_003273932	G1RC91

Gene Model

Click here to download ENSNLEG00000008891's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000008891's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000008891	RCL1	100	96.783	ENSG00000120158	RCL1	100	96.783	Homo_sapiens
ENSNLEG00000008891	RCL1	100	76.203	ENSAPOG00000015666	rcl1	100	76.203	Acanthochromis_polyacanthus
ENSNLEG00000008891	RCL1	100	94.370	ENSAMEG00000002631	RCL1	100	94.370	Ailuropoda_melanoleuca
ENSNLEG00000008891	RCL1	99	76.757	ENSACIG00000021195	rcl1	99	76.757	Amphilophus_citrinellus
ENSNLEG00000008891	RCL1	100	75.668	ENSAOCG00000002223	rcl1	100	75.668	Amphiprion_ocellaris
ENSNLEG00000008891	RCL1	100	75.936	ENSAPEG00000006905	rcl1	100	75.936	Amphiprion_percula
ENSNLEG00000008891	RCL1	99	74.054	ENSATEG00000020026	rcl1	99	74.054	Anabas_testudineus
ENSNLEG00000008891	RCL1	88	85.185	ENSAPLG00000006031	RCL1	100	85.185	Anas_platyrhynchos
ENSNLEG00000008891	RCL1	100	82.306	ENSACAG00000003640	RCL1	100	82.306	Anolis_carolinensis
ENSNLEG00000008891	RCL1	100	95.710	ENSANAG00000037372	RCL1	100	95.710	Aotus_nancymaae
ENSNLEG00000008891	RCL1	99	76.216	ENSACLG00000021724	rcl1	99	76.216	Astatotilapia_calliptera
ENSNLEG00000008891	RCL1	98	75.543	ENSAMXG00000033394	rcl1	99	75.543	Astyanax_mexicanus
ENSNLEG00000008891	RCL1	99	44.947	WBGene00022852	ZK1127.5	99	44.947	Caenorhabditis_elegans
ENSNLEG00000008891	RCL1	100	96.515	ENSCJAG00000011202	RCL1	100	96.515	Callithrix_jacchus
ENSNLEG00000008891	RCL1	100	93.298	ENSCAFG00000002091	RCL1	100	93.298	Canis_familiaris
ENSNLEG00000008891	RCL1	100	93.298	ENSCAFG00020000638	RCL1	78	93.298	Canis_lupus_dingo
ENSNLEG00000008891	RCL1	100	93.298	ENSCHIG00000012407	RCL1	100	93.298	Capra_hircus
ENSNLEG00000008891	RCL1	87	95.107	ENSTSYG00000009592	RCL1	97	91.713	Carlito_syrichta
ENSNLEG00000008891	RCL1	67	80.347	ENSCAPG00000013575	RCL1	100	80.347	Cavia_aperea
ENSNLEG00000008891	RCL1	100	94.102	ENSCPOG00000015354	RCL1	100	94.102	Cavia_porcellus
ENSNLEG00000008891	RCL1	100	96.515	ENSCCAG00000033505	RCL1	100	96.515	Cebus_capucinus
ENSNLEG00000008891	RCL1	100	95.710	ENSCATG00000034721	RCL1	100	95.710	Cercocebus_atys
ENSNLEG00000008891	RCL1	100	94.370	ENSCLAG00000007445	RCL1	100	94.370	Chinchilla_lanigera
ENSNLEG00000008891	RCL1	100	96.247	ENSCSAG00000008811	RCL1	100	96.247	Chlorocebus_sabaeus
ENSNLEG00000008891	RCL1	88	81.734	ENSCHOG00000007216	RCL1	100	81.734	Choloepus_hoffmanni
ENSNLEG00000008891	RCL1	100	86.327	ENSCPBG00000025481	RCL1	94	86.018	Chrysemys_picta_bellii
ENSNLEG00000008891	RCL1	98	56.486	ENSCING00000019565	-	98	56.486	Ciona_intestinalis
ENSNLEG00000008891	RCL1	100	96.515	ENSCANG00000027099	RCL1	100	96.515	Colobus_angolensis_palliatus
ENSNLEG00000008891	RCL1	100	93.029	ENSCGRG00001013748	Rcl1	100	93.029	Cricetulus_griseus_chok1gshd
ENSNLEG00000008891	RCL1	88	92.378	ENSCGRG00000005843	Rcl1	99	92.378	Cricetulus_griseus_crigri
ENSNLEG00000008891	RCL1	99	76.757	ENSCSEG00000000712	rcl1	97	76.757	Cynoglossus_semilaevis
ENSNLEG00000008891	RCL1	99	77.838	ENSCVAG00000011536	rcl1	99	77.838	Cyprinodon_variegatus
ENSNLEG00000008891	RCL1	98	73.842	ENSDARG00000038312	rcl1	100	73.842	Danio_rerio
ENSNLEG00000008891	RCL1	70	92.830	ENSDNOG00000019911	RCL1	100	92.830	Dasypus_novemcinctus
ENSNLEG00000008891	RCL1	100	93.566	ENSDORG00000015645	Rcl1	100	93.566	Dipodomys_ordii
ENSNLEG00000008891	RCL1	99	52.381	FBgn0020909	Rtc1	98	52.381	Drosophila_melanogaster
ENSNLEG00000008891	RCL1	71	100.000	ENSETEG00000014087	-	82	100.000	Echinops_telfairi
ENSNLEG00000008891	RCL1	100	53.067	ENSEBUG00000016621	-	100	53.067	Eptatretus_burgeri
ENSNLEG00000008891	RCL1	100	94.906	ENSEASG00005010653	RCL1	100	94.906	Equus_asinus_asinus
ENSNLEG00000008891	RCL1	100	94.906	ENSECAG00000015973	RCL1	100	94.906	Equus_caballus
ENSNLEG00000008891	RCL1	100	83.562	ENSEEUG00000009801	RCL1	100	83.562	Erinaceus_europaeus
ENSNLEG00000008891	RCL1	100	73.797	ENSELUG00000007353	rcl1	100	73.797	Esox_lucius
ENSNLEG00000008891	RCL1	100	92.493	ENSFCAG00000014557	RCL1	100	92.493	Felis_catus
ENSNLEG00000008891	RCL1	95	79.718	ENSFALG00000010553	RCL1	94	79.718	Ficedula_albicollis
ENSNLEG00000008891	RCL1	87	92.966	ENSFDAG00000004209	RCL1	100	92.966	Fukomys_damarensis
ENSNLEG00000008891	RCL1	99	77.297	ENSFHEG00000011228	rcl1	99	77.297	Fundulus_heteroclitus
ENSNLEG00000008891	RCL1	99	75.135	ENSGMOG00000004677	rcl1	99	75.135	Gadus_morhua
ENSNLEG00000008891	RCL1	99	83.469	ENSGALG00000015024	RCL1	99	83.469	Gallus_gallus
ENSNLEG00000008891	RCL1	99	75.946	ENSGAFG00000007257	rcl1	99	75.946	Gambusia_affinis
ENSNLEG00000008891	RCL1	100	75.401	ENSGACG00000017474	rcl1	100	75.401	Gasterosteus_aculeatus
ENSNLEG00000008891	RCL1	100	86.863	ENSGAGG00000003689	RCL1	100	86.863	Gopherus_agassizii
ENSNLEG00000008891	RCL1	100	96.247	ENSGGOG00000015041	RCL1	100	96.247	Gorilla_gorilla
ENSNLEG00000008891	RCL1	99	76.486	ENSHBUG00000001393	rcl1	99	76.486	Haplochromis_burtoni
ENSNLEG00000008891	RCL1	100	79.839	ENSHGLG00000005368	-	100	79.301	Heterocephalus_glaber_female
ENSNLEG00000008891	RCL1	100	94.370	ENSHGLG00000016452	RCL1	100	94.370	Heterocephalus_glaber_female
ENSNLEG00000008891	RCL1	100	80.914	ENSHGLG00100018010	-	100	80.376	Heterocephalus_glaber_male
ENSNLEG00000008891	RCL1	100	87.399	ENSHGLG00100008718	-	100	87.399	Heterocephalus_glaber_male
ENSNLEG00000008891	RCL1	99	75.676	ENSHCOG00000020170	rcl1	99	75.676	Hippocampus_comes
ENSNLEG00000008891	RCL1	98	77.446	ENSIPUG00000018054	RCL1	99	77.446	Ictalurus_punctatus
ENSNLEG00000008891	RCL1	100	94.370	ENSSTOG00000000023	RCL1	100	94.370	Ictidomys_tridecemlineatus
ENSNLEG00000008891	RCL1	53	69.154	ENSJJAG00000000764	-	95	69.072	Jaculus_jaculus
ENSNLEG00000008891	RCL1	100	93.029	ENSJJAG00000022803	-	100	93.029	Jaculus_jaculus
ENSNLEG00000008891	RCL1	100	82.306	ENSJJAG00000015632	-	100	82.306	Jaculus_jaculus
ENSNLEG00000008891	RCL1	98	75.749	ENSKMAG00000011946	rcl1	99	75.749	Kryptolebias_marmoratus
ENSNLEG00000008891	RCL1	99	73.784	ENSLBEG00000003957	rcl1	99	73.784	Labrus_bergylta
ENSNLEG00000008891	RCL1	87	85.489	ENSLACG00000004594	RCL1	98	85.489	Latimeria_chalumnae
ENSNLEG00000008891	RCL1	100	79.088	ENSLOCG00000010148	rcl1	98	79.088	Lepisosteus_oculatus
ENSNLEG00000008891	RCL1	100	90.617	ENSLAFG00000017495	RCL1	100	90.617	Loxodonta_africana
ENSNLEG00000008891	RCL1	100	96.247	ENSMFAG00000037906	RCL1	100	96.247	Macaca_fascicularis
ENSNLEG00000008891	RCL1	100	92.571	ENSMMUG00000041751	-	100	92.571	Macaca_mulatta
ENSNLEG00000008891	RCL1	100	96.247	ENSMNEG00000012288	RCL1	100	96.247	Macaca_nemestrina
ENSNLEG00000008891	RCL1	100	96.247	ENSMLEG00000043088	RCL1	100	96.247	Mandrillus_leucophaeus
ENSNLEG00000008891	RCL1	99	76.757	ENSMAMG00000008311	rcl1	99	76.757	Mastacembelus_armatus
ENSNLEG00000008891	RCL1	99	76.216	ENSMZEG00005017292	rcl1	99	76.216	Maylandia_zebra
ENSNLEG00000008891	RCL1	57	79.452	ENSMGAG00000002245	RCL1	97	79.245	Meleagris_gallopavo
ENSNLEG00000008891	RCL1	57	91.163	ENSMAUG00000008922	Rcl1	97	90.865	Mesocricetus_auratus
ENSNLEG00000008891	RCL1	100	93.834	ENSMICG00000015562	RCL1	100	93.834	Microcebus_murinus
ENSNLEG00000008891	RCL1	100	94.102	ENSMOCG00000012145	Rcl1	100	94.102	Microtus_ochrogaster
ENSNLEG00000008891	RCL1	99	73.854	ENSMMOG00000021264	rcl1	99	73.854	Mola_mola
ENSNLEG00000008891	RCL1	95	90.704	ENSMODG00000015377	RCL1	94	90.704	Monodelphis_domestica
ENSNLEG00000008891	RCL1	99	75.135	ENSMALG00000018618	rcl1	99	75.135	Monopterus_albus
ENSNLEG00000008891	RCL1	100	94.102	MGP_CAROLIEiJ_G0022853	Rcl1	100	94.102	Mus_caroli
ENSNLEG00000008891	RCL1	100	94.102	ENSMUSG00000024785	Rcl1	100	94.102	Mus_musculus
ENSNLEG00000008891	RCL1	100	93.298	MGP_PahariEiJ_G0014346	Rcl1	100	93.298	Mus_pahari
ENSNLEG00000008891	RCL1	100	93.298	MGP_SPRETEiJ_G0023771	Rcl1	100	93.298	Mus_spretus
ENSNLEG00000008891	RCL1	100	93.298	ENSMPUG00000004998	RCL1	100	93.298	Mustela_putorius_furo
ENSNLEG00000008891	RCL1	100	93.834	ENSMLUG00000009654	RCL1	100	93.834	Myotis_lucifugus
ENSNLEG00000008891	RCL1	100	94.370	ENSNGAG00000015327	Rcl1	100	94.370	Nannospalax_galili
ENSNLEG00000008891	RCL1	90	75.074	ENSNBRG00000019854	rcl1	96	71.788	Neolamprologus_brichardi
ENSNLEG00000008891	RCL1	100	84.182	ENSMEUG00000007653	RCL1	100	84.182	Notamacropus_eugenii
ENSNLEG00000008891	RCL1	100	93.566	ENSOPRG00000010965	RCL1	100	93.566	Ochotona_princeps
ENSNLEG00000008891	RCL1	88	76.506	ENSODEG00000004151	RCL1	96	77.439	Octodon_degus
ENSNLEG00000008891	RCL1	99	76.216	ENSONIG00000003871	rcl1	99	76.216	Oreochromis_niloticus
ENSNLEG00000008891	RCL1	66	83.399	ENSOANG00000013193	-	100	83.399	Ornithorhynchus_anatinus
ENSNLEG00000008891	RCL1	75	83.206	ENSOANG00000013194	-	99	83.206	Ornithorhynchus_anatinus
ENSNLEG00000008891	RCL1	100	95.174	ENSOCUG00000008161	RCL1	100	95.174	Oryctolagus_cuniculus
ENSNLEG00000008891	RCL1	100	73.797	ENSORLG00000010443	rcl1	100	73.797	Oryzias_latipes
ENSNLEG00000008891	RCL1	100	73.797	ENSORLG00020012211	rcl1	100	73.797	Oryzias_latipes_hni
ENSNLEG00000008891	RCL1	100	73.529	ENSORLG00015001122	rcl1	100	73.529	Oryzias_latipes_hsok
ENSNLEG00000008891	RCL1	100	75.401	ENSOMEG00000022976	rcl1	88	75.401	Oryzias_melastigma
ENSNLEG00000008891	RCL1	100	92.761	ENSOGAG00000007480	RCL1	100	92.761	Otolemur_garnettii
ENSNLEG00000008891	RCL1	100	93.566	ENSOARG00000013463	RCL1	100	93.566	Ovis_aries
ENSNLEG00000008891	RCL1	100	96.515	ENSPPAG00000037958	RCL1	100	96.515	Pan_paniscus
ENSNLEG00000008891	RCL1	100	91.689	ENSPPRG00000022645	RCL1	100	91.689	Panthera_pardus
ENSNLEG00000008891	RCL1	87	92.025	ENSPTIG00000019031	RCL1	97	89.423	Panthera_tigris_altaica
ENSNLEG00000008891	RCL1	100	96.247	ENSPTRG00000020743	RCL1	100	96.247	Pan_troglodytes
ENSNLEG00000008891	RCL1	100	96.247	ENSPANG00000025151	RCL1	100	96.247	Papio_anubis
ENSNLEG00000008891	RCL1	100	75.401	ENSPKIG00000021022	rcl1	100	75.401	Paramormyrops_kingsleyae
ENSNLEG00000008891	RCL1	88	86.890	ENSPSIG00000012302	RCL1	100	86.890	Pelodiscus_sinensis
ENSNLEG00000008891	RCL1	100	74.064	ENSPMGG00000024007	rcl1	100	74.064	Periophthalmus_magnuspinnatus
ENSNLEG00000008891	RCL1	100	94.102	ENSPEMG00000023275	Rcl1	100	94.102	Peromyscus_maniculatus_bairdii
ENSNLEG00000008891	RCL1	96	31.405	ENSPMAG00000009110	rtca	96	31.405	Petromyzon_marinus
ENSNLEG00000008891	RCL1	100	91.153	ENSPCIG00000000188	RCL1	100	91.153	Phascolarctos_cinereus
ENSNLEG00000008891	RCL1	99	76.757	ENSPFOG00000019682	rcl1	99	76.757	Poecilia_formosa
ENSNLEG00000008891	RCL1	99	76.757	ENSPLAG00000022354	rcl1	99	76.757	Poecilia_latipinna
ENSNLEG00000008891	RCL1	99	76.757	ENSPMEG00000008131	rcl1	99	76.757	Poecilia_mexicana
ENSNLEG00000008891	RCL1	99	76.757	ENSPREG00000008032	rcl1	99	76.757	Poecilia_reticulata
ENSNLEG00000008891	RCL1	100	96.515	ENSPPYG00000019244	RCL1	100	96.515	Pongo_abelii
ENSNLEG00000008891	RCL1	100	83.378	ENSPCAG00000001440	RCL1	100	83.378	Procavia_capensis
ENSNLEG00000008891	RCL1	100	95.174	ENSPCOG00000009611	RCL1	100	95.174	Propithecus_coquereli
ENSNLEG00000008891	RCL1	100	94.102	ENSPVAG00000015752	RCL1	100	94.102	Pteropus_vampyrus
ENSNLEG00000008891	RCL1	99	76.216	ENSPNYG00000012910	rcl1	99	76.216	Pundamilia_nyererei
ENSNLEG00000008891	RCL1	99	75.603	ENSPNAG00000028307	rcl1	92	75.603	Pygocentrus_nattereri
ENSNLEG00000008891	RCL1	100	93.834	ENSRNOG00000015491	Rcl1	100	93.834	Rattus_norvegicus
ENSNLEG00000008891	RCL1	100	97.043	ENSRBIG00000035818	RCL1	100	97.043	Rhinopithecus_bieti
ENSNLEG00000008891	RCL1	100	96.247	ENSRROG00000029781	RCL1	100	96.247	Rhinopithecus_roxellana
ENSNLEG00000008891	RCL1	98	36.141	YOL010W	-	97	34.959	Saccharomyces_cerevisiae
ENSNLEG00000008891	RCL1	100	95.979	ENSSBOG00000026369	RCL1	100	95.979	Saimiri_boliviensis_boliviensis
ENSNLEG00000008891	RCL1	88	89.394	ENSSHAG00000014086	RCL1	100	89.394	Sarcophilus_harrisii
ENSNLEG00000008891	RCL1	100	75.668	ENSSFOG00015023020	rcl1	100	75.668	Scleropages_formosus
ENSNLEG00000008891	RCL1	99	76.486	ENSSMAG00000019751	rcl1	85	76.486	Scophthalmus_maximus
ENSNLEG00000008891	RCL1	100	75.401	ENSSDUG00000006349	rcl1	100	75.401	Seriola_dumerili
ENSNLEG00000008891	RCL1	100	75.668	ENSSLDG00000022076	rcl1	100	75.668	Seriola_lalandi_dorsalis
ENSNLEG00000008891	RCL1	100	93.029	ENSSARG00000009260	RCL1	100	93.029	Sorex_araneus
ENSNLEG00000008891	RCL1	100	85.255	ENSSPUG00000016330	RCL1	100	85.255	Sphenodon_punctatus
ENSNLEG00000008891	RCL1	100	77.540	ENSSPAG00000018038	rcl1	100	77.540	Stegastes_partitus
ENSNLEG00000008891	RCL1	100	94.906	ENSSSCG00000005217	RCL1	83	94.906	Sus_scrofa
ENSNLEG00000008891	RCL1	100	82.133	ENSTGUG00000005138	RCL1	100	82.133	Taeniopygia_guttata
ENSNLEG00000008891	RCL1	99	76.216	ENSTRUG00000010493	rcl1	99	76.216	Takifugu_rubripes
ENSNLEG00000008891	RCL1	99	75.068	ENSTNIG00000013214	rcl1	99	75.068	Tetraodon_nigroviridis
ENSNLEG00000008891	RCL1	100	87.668	ENSTBEG00000016339	RCL1	100	87.668	Tupaia_belangeri
ENSNLEG00000008891	RCL1	100	93.566	ENSTTRG00000016525	RCL1	100	93.566	Tursiops_truncatus
ENSNLEG00000008891	RCL1	100	94.370	ENSUAMG00000005598	RCL1	100	96.914	Ursus_americanus
ENSNLEG00000008891	RCL1	87	92.966	ENSUMAG00000017890	RCL1	97	92.966	Ursus_maritimus
ENSNLEG00000008891	RCL1	87	94.495	ENSVPAG00000009188	RCL1	100	94.495	Vicugna_pacos
ENSNLEG00000008891	RCL1	88	92.988	ENSVVUG00000007304	RCL1	89	92.988	Vulpes_vulpes
ENSNLEG00000008891	RCL1	100	73.190	ENSXETG00000000592	rcl1	100	73.190	Xenopus_tropicalis
ENSNLEG00000008891	RCL1	60	30.455	ENSXCOG00000008002	rtca	63	30.455	Xiphophorus_couchianus
ENSNLEG00000008891	RCL1	99	76.757	ENSXCOG00000004922	rcl1	99	76.757	Xiphophorus_couchianus
ENSNLEG00000008891	RCL1	99	76.757	ENSXMAG00000022366	RCL1	99	76.757	Xiphophorus_maculatus