EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000009202 (Gene tree)
Gene ID: 100590976
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 28324 bases
Position: chr9:37516772-37545095
Accession: 100590976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000031137	YTH	PF04146.15	7e-39	1	1
ENSNLEP00000011227	YTH	PF04146.15	1.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000011780	YTHDC1-201	2178	XM_003268429	ENSNLEP00000011227	725 (aa)	XP_003268477	G1RDC8
ENSNLET00000057166	YTHDC1-202	1605	-	ENSNLEP00000031137	534 (aa)	-	A0A2I3GIN7

Gene Model

Click here to download ENSNLEG00000009202's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000009202's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000009202	YTHDC1	99	98.762	ENSG00000083896	YTHDC1	100	100.000	Homo_sapiens
ENSNLEG00000009202	YTHDC1	57	58.392	ENSAPOG00000013997	ythdc1	57	60.890	Acanthochromis_polyacanthus
ENSNLEG00000009202	YTHDC1	99	95.885	ENSAMEG00000005688	YTHDC1	99	95.885	Ailuropoda_melanoleuca
ENSNLEG00000009202	YTHDC1	64	67.969	ENSACIG00000019728	ythdc1	78	58.216	Amphilophus_citrinellus
ENSNLEG00000009202	YTHDC1	57	59.459	ENSAOCG00000000239	ythdc1	59	65.101	Amphiprion_ocellaris
ENSNLEG00000009202	YTHDC1	50	63.612	ENSAPEG00000000618	ythdc1	53	66.053	Amphiprion_percula
ENSNLEG00000009202	YTHDC1	96	81.888	ENSAPLG00000009921	YTHDC1	92	84.970	Anas_platyrhynchos
ENSNLEG00000009202	YTHDC1	96	80.614	ENSACAG00000009697	YTHDC1	91	81.872	Anolis_carolinensis
ENSNLEG00000009202	YTHDC1	100	98.085	ENSANAG00000001522	YTHDC1	100	98.085	Aotus_nancymaae
ENSNLEG00000009202	YTHDC1	92	50.071	ENSACLG00000019371	ythdc1	59	64.270	Astatotilapia_calliptera
ENSNLEG00000009202	YTHDC1	96	60.829	ENSAMXG00000006978	ythdc1	91	64.638	Astyanax_mexicanus
ENSNLEG00000009202	YTHDC1	99	95.736	ENSBTAG00000015572	YTHDC1	99	95.736	Bos_taurus
ENSNLEG00000009202	YTHDC1	99	97.662	ENSCJAG00000009934	YTHDC1	99	97.662	Callithrix_jacchus
ENSNLEG00000009202	YTHDC1	99	95.885	ENSCAFG00000002821	YTHDC1	99	95.885	Canis_familiaris
ENSNLEG00000009202	YTHDC1	99	95.885	ENSCAFG00020027112	YTHDC1	99	95.885	Canis_lupus_dingo
ENSNLEG00000009202	YTHDC1	99	93.832	ENSCHIG00000004810	YTHDC1	98	93.271	Capra_hircus
ENSNLEG00000009202	YTHDC1	99	96.974	ENSTSYG00000011668	YTHDC1	99	96.974	Carlito_syrichta
ENSNLEG00000009202	YTHDC1	98	70.644	ENSCAPG00000008722	YTHDC1	91	67.010	Cavia_aperea
ENSNLEG00000009202	YTHDC1	96	95.238	ENSCPOG00000010929	YTHDC1	99	89.133	Cavia_porcellus
ENSNLEG00000009202	YTHDC1	99	97.531	ENSCCAG00000035754	YTHDC1	99	97.531	Cebus_capucinus
ENSNLEG00000009202	YTHDC1	99	99.037	ENSCATG00000036320	YTHDC1	100	98.694	Cercocebus_atys
ENSNLEG00000009202	YTHDC1	99	96.970	ENSCLAG00000005482	YTHDC1	99	96.970	Chinchilla_lanigera
ENSNLEG00000009202	YTHDC1	99	97.799	ENSCSAG00000005252	YTHDC1	99	97.799	Chlorocebus_sabaeus
ENSNLEG00000009202	YTHDC1	97	83.969	ENSCPBG00000021965	YTHDC1	94	85.518	Chrysemys_picta_bellii
ENSNLEG00000009202	YTHDC1	100	99.179	ENSCANG00000004769	YTHDC1	100	99.179	Colobus_angolensis_palliatus
ENSNLEG00000009202	YTHDC1	99	96.424	ENSCGRG00001000816	Ythdc1	99	96.424	Cricetulus_griseus_chok1gshd
ENSNLEG00000009202	YTHDC1	99	95.323	ENSCGRG00000009807	Ythdc1	99	95.323	Cricetulus_griseus_crigri
ENSNLEG00000009202	YTHDC1	57	58.442	ENSCSEG00000020404	ythdc1	59	64.126	Cynoglossus_semilaevis
ENSNLEG00000009202	YTHDC1	50	66.058	ENSCVAG00000022349	ythdc1	59	63.288	Cyprinodon_variegatus
ENSNLEG00000009202	YTHDC1	96	59.082	ENSDARG00000051953	ythdc1	58	75.751	Danio_rerio
ENSNLEG00000009202	YTHDC1	99	94.780	ENSDNOG00000004949	YTHDC1	99	94.780	Dasypus_novemcinctus
ENSNLEG00000009202	YTHDC1	99	97.658	ENSDORG00000013045	Ythdc1	99	97.658	Dipodomys_ordii
ENSNLEG00000009202	YTHDC1	78	93.671	ENSETEG00000001878	YTHDC1	77	93.671	Echinops_telfairi
ENSNLEG00000009202	YTHDC1	99	96.433	ENSEASG00005018383	YTHDC1	100	96.361	Equus_asinus_asinus
ENSNLEG00000009202	YTHDC1	99	96.022	ENSECAG00000018303	YTHDC1	100	95.924	Equus_caballus
ENSNLEG00000009202	YTHDC1	96	92.015	ENSEEUG00000015466	YTHDC1	91	94.354	Erinaceus_europaeus
ENSNLEG00000009202	YTHDC1	95	60.000	ENSELUG00000014029	ythdc1	93	61.391	Esox_lucius
ENSNLEG00000009202	YTHDC1	99	95.742	ENSFCAG00000026791	YTHDC1	99	95.742	Felis_catus
ENSNLEG00000009202	YTHDC1	68	86.937	ENSFALG00000006581	YTHDC1	85	90.931	Ficedula_albicollis
ENSNLEG00000009202	YTHDC1	99	95.868	ENSFDAG00000018560	YTHDC1	100	95.868	Fukomys_damarensis
ENSNLEG00000009202	YTHDC1	65	66.667	ENSFHEG00000001286	ythdc1	60	54.118	Fundulus_heteroclitus
ENSNLEG00000009202	YTHDC1	63	62.766	ENSGMOG00000018815	ythdc1	78	62.766	Gadus_morhua
ENSNLEG00000009202	YTHDC1	99	83.738	ENSGALG00000035906	YTHDC1	90	83.925	Gallus_gallus
ENSNLEG00000009202	YTHDC1	67	64.964	ENSGAFG00000001759	ythdc1	54	66.304	Gambusia_affinis
ENSNLEG00000009202	YTHDC1	57	61.395	ENSGACG00000015486	ythdc1	57	61.521	Gasterosteus_aculeatus
ENSNLEG00000009202	YTHDC1	96	84.586	ENSGAGG00000007108	YTHDC1	91	86.607	Gopherus_agassizii
ENSNLEG00000009202	YTHDC1	99	99.036	ENSGGOG00000021958	YTHDC1	99	99.036	Gorilla_gorilla
ENSNLEG00000009202	YTHDC1	92	53.229	ENSHBUG00000019288	ythdc1	59	64.270	Haplochromis_burtoni
ENSNLEG00000009202	YTHDC1	99	96.561	ENSHGLG00000006319	-	99	96.561	Heterocephalus_glaber_female
ENSNLEG00000009202	YTHDC1	96	71.042	ENSHGLG00000003239	-	68	71.622	Heterocephalus_glaber_female
ENSNLEG00000009202	YTHDC1	99	95.736	ENSHGLG00100001556	-	100	95.736	Heterocephalus_glaber_male
ENSNLEG00000009202	YTHDC1	96	69.098	ENSHGLG00100008060	-	68	69.674	Heterocephalus_glaber_male
ENSNLEG00000009202	YTHDC1	53	65.789	ENSHCOG00000001520	ythdc1	82	65.789	Hippocampus_comes
ENSNLEG00000009202	YTHDC1	96	64.695	ENSIPUG00000018136	ythdc1	61	81.549	Ictalurus_punctatus
ENSNLEG00000009202	YTHDC1	99	98.212	ENSSTOG00000013652	YTHDC1	99	98.212	Ictidomys_tridecemlineatus
ENSNLEG00000009202	YTHDC1	96	91.522	ENSJJAG00000010268	Ythdc1	93	91.964	Jaculus_jaculus
ENSNLEG00000009202	YTHDC1	57	58.520	ENSKMAG00000006483	ythdc1	85	63.474	Kryptolebias_marmoratus
ENSNLEG00000009202	YTHDC1	54	71.429	ENSLBEG00000020831	ythdc1	71	71.429	Labrus_bergylta
ENSNLEG00000009202	YTHDC1	87	73.023	ENSLACG00000004893	YTHDC1	92	73.107	Latimeria_chalumnae
ENSNLEG00000009202	YTHDC1	92	72.741	ENSLOCG00000003045	ythdc1	91	86.085	Lepisosteus_oculatus
ENSNLEG00000009202	YTHDC1	99	96.011	ENSLAFG00000021592	YTHDC1	99	96.011	Loxodonta_africana
ENSNLEG00000009202	YTHDC1	100	99.179	ENSMFAG00000031927	YTHDC1	100	99.179	Macaca_fascicularis
ENSNLEG00000009202	YTHDC1	99	99.174	ENSMMUG00000002265	YTHDC1	99	99.174	Macaca_mulatta
ENSNLEG00000009202	YTHDC1	100	99.179	ENSMNEG00000033751	YTHDC1	100	99.179	Macaca_nemestrina
ENSNLEG00000009202	YTHDC1	100	99.179	ENSMLEG00000042147	YTHDC1	100	99.179	Mandrillus_leucophaeus
ENSNLEG00000009202	YTHDC1	92	50.071	ENSMZEG00005023173	ythdc1	59	64.270	Maylandia_zebra
ENSNLEG00000009202	YTHDC1	96	80.385	ENSMGAG00000010391	YTHDC1	91	84.250	Meleagris_gallopavo
ENSNLEG00000009202	YTHDC1	99	96.149	ENSMAUG00000001286	Ythdc1	99	96.149	Mesocricetus_auratus
ENSNLEG00000009202	YTHDC1	99	97.390	ENSMICG00000034640	YTHDC1	99	97.390	Microcebus_murinus
ENSNLEG00000009202	YTHDC1	99	96.424	ENSMOCG00000020201	Ythdc1	99	96.424	Microtus_ochrogaster
ENSNLEG00000009202	YTHDC1	94	51.845	ENSMODG00000010076	-	95	50.595	Monodelphis_domestica
ENSNLEG00000009202	YTHDC1	65	56.067	ENSMODG00000009173	-	88	59.479	Monodelphis_domestica
ENSNLEG00000009202	YTHDC1	96	86.705	ENSMODG00000020754	-	91	87.202	Monodelphis_domestica
ENSNLEG00000009202	YTHDC1	85	72.364	ENSMODG00000014337	-	94	67.542	Monodelphis_domestica
ENSNLEG00000009202	YTHDC1	50	67.148	ENSMALG00000013412	ythdc1	56	65.873	Monopterus_albus
ENSNLEG00000009202	YTHDC1	99	92.435	MGP_CAROLIEiJ_G0027347	Ythdc1	96	92.804	Mus_caroli
ENSNLEG00000009202	YTHDC1	99	96.154	ENSMUSG00000035851	Ythdc1	99	96.154	Mus_musculus
ENSNLEG00000009202	YTHDC1	99	96.429	MGP_PahariEiJ_G0017126	Ythdc1	99	96.429	Mus_pahari
ENSNLEG00000009202	YTHDC1	99	96.429	MGP_SPRETEiJ_G0028339	Ythdc1	99	96.429	Mus_spretus
ENSNLEG00000009202	YTHDC1	92	71.302	ENSMPUG00000001743	YTHDC1	53	95.396	Mustela_putorius_furo
ENSNLEG00000009202	YTHDC1	99	95.724	ENSMLUG00000016300	YTHDC1	100	95.724	Myotis_lucifugus
ENSNLEG00000009202	YTHDC1	81	86.230	ENSNGAG00000024000	Ythdc1	93	88.610	Nannospalax_galili
ENSNLEG00000009202	YTHDC1	60	61.774	ENSNBRG00000007663	ythdc1	70	64.450	Neolamprologus_brichardi
ENSNLEG00000009202	YTHDC1	82	80.625	ENSMEUG00000007128	YTHDC1	81	79.805	Notamacropus_eugenii
ENSNLEG00000009202	YTHDC1	75	96.676	ENSOPRG00000008986	YTHDC1	74	96.676	Ochotona_princeps
ENSNLEG00000009202	YTHDC1	99	96.281	ENSODEG00000001715	YTHDC1	99	96.281	Octodon_degus
ENSNLEG00000009202	YTHDC1	92	53.425	ENSONIG00000012651	ythdc1	59	64.719	Oreochromis_niloticus
ENSNLEG00000009202	YTHDC1	89	76.758	ENSOANG00000014398	YTHDC1	55	96.203	Ornithorhynchus_anatinus
ENSNLEG00000009202	YTHDC1	92	79.882	ENSOCUG00000015886	YTHDC1	57	92.611	Oryctolagus_cuniculus
ENSNLEG00000009202	YTHDC1	92	52.362	ENSOMEG00000000551	ythdc1	72	52.985	Oryzias_melastigma
ENSNLEG00000009202	YTHDC1	99	95.736	ENSOGAG00000003362	YTHDC1	99	95.736	Otolemur_garnettii
ENSNLEG00000009202	YTHDC1	99	95.736	ENSOARG00000008633	YTHDC1	99	95.736	Ovis_aries
ENSNLEG00000009202	YTHDC1	99	98.898	ENSPPAG00000041315	YTHDC1	99	98.898	Pan_paniscus
ENSNLEG00000009202	YTHDC1	99	96.978	ENSPPRG00000011979	YTHDC1	99	96.978	Panthera_pardus
ENSNLEG00000009202	YTHDC1	99	96.836	ENSPTIG00000015527	YTHDC1	100	96.836	Panthera_tigris_altaica
ENSNLEG00000009202	YTHDC1	99	98.898	ENSPTRG00000016105	YTHDC1	99	98.898	Pan_troglodytes
ENSNLEG00000009202	YTHDC1	100	98.503	ENSPANG00000021590	YTHDC1	100	98.503	Papio_anubis
ENSNLEG00000009202	YTHDC1	96	67.686	ENSPKIG00000018497	ythdc1	91	67.249	Paramormyrops_kingsleyae
ENSNLEG00000009202	YTHDC1	96	84.231	ENSPSIG00000002782	YTHDC1	92	85.141	Pelodiscus_sinensis
ENSNLEG00000009202	YTHDC1	99	96.836	ENSPEMG00000013850	Ythdc1	99	96.836	Peromyscus_maniculatus_bairdii
ENSNLEG00000009202	YTHDC1	96	86.513	ENSPCIG00000006870	YTHDC1	91	87.054	Phascolarctos_cinereus
ENSNLEG00000009202	YTHDC1	57	57.812	ENSPFOG00000013404	ythdc1	60	63.371	Poecilia_formosa
ENSNLEG00000009202	YTHDC1	57	57.812	ENSPLAG00000011079	ythdc1	85	62.921	Poecilia_latipinna
ENSNLEG00000009202	YTHDC1	57	57.812	ENSPMEG00000009238	ythdc1	60	63.371	Poecilia_mexicana
ENSNLEG00000009202	YTHDC1	57	57.882	ENSPREG00000016973	ythdc1	76	51.238	Poecilia_reticulata
ENSNLEG00000009202	YTHDC1	87	97.500	ENSPPYG00000014726	YTHDC1	100	97.500	Pongo_abelii
ENSNLEG00000009202	YTHDC1	77	100.000	ENSPCAG00000009607	YTHDC1	75	88.253	Procavia_capensis
ENSNLEG00000009202	YTHDC1	99	94.191	ENSPCOG00000019105	YTHDC1	99	94.191	Propithecus_coquereli
ENSNLEG00000009202	YTHDC1	96	90.359	ENSPVAG00000015551	YTHDC1	91	91.272	Pteropus_vampyrus
ENSNLEG00000009202	YTHDC1	92	50.071	ENSPNYG00000011687	ythdc1	59	64.270	Pundamilia_nyererei
ENSNLEG00000009202	YTHDC1	96	67.681	ENSPNAG00000028365	ythdc1	91	68.116	Pygocentrus_nattereri
ENSNLEG00000009202	YTHDC1	96	90.737	ENSRNOG00000001996	Ythdc1	91	93.491	Rattus_norvegicus
ENSNLEG00000009202	YTHDC1	100	98.085	ENSRBIG00000028279	YTHDC1	100	98.085	Rhinopithecus_bieti
ENSNLEG00000009202	YTHDC1	100	99.179	ENSRROG00000035028	YTHDC1	100	99.179	Rhinopithecus_roxellana
ENSNLEG00000009202	YTHDC1	100	98.769	ENSSBOG00000022353	YTHDC1	100	98.769	Saimiri_boliviensis_boliviensis
ENSNLEG00000009202	YTHDC1	96	86.705	ENSSHAG00000002538	YTHDC1	91	87.054	Sarcophilus_harrisii
ENSNLEG00000009202	YTHDC1	96	66.160	ENSSFOG00015003298	ythdc1	60	83.488	Scleropages_formosus
ENSNLEG00000009202	YTHDC1	57	58.370	ENSSMAG00000009086	ythdc1	60	63.453	Scophthalmus_maximus
ENSNLEG00000009202	YTHDC1	80	96.581	ENSSARG00000010960	YTHDC1	100	96.581	Sorex_araneus
ENSNLEG00000009202	YTHDC1	96	78.887	ENSSPUG00000009357	YTHDC1	93	82.263	Sphenodon_punctatus
ENSNLEG00000009202	YTHDC1	57	60.360	ENSSPAG00000011449	ythdc1	59	65.101	Stegastes_partitus
ENSNLEG00000009202	YTHDC1	99	96.306	ENSSSCG00000035505	YTHDC1	100	96.226	Sus_scrofa
ENSNLEG00000009202	YTHDC1	96	83.269	ENSTGUG00000004452	-	91	84.695	Taeniopygia_guttata
ENSNLEG00000009202	YTHDC1	92	47.109	ENSTRUG00000010142	ythdc1	69	67.500	Takifugu_rubripes
ENSNLEG00000009202	YTHDC1	90	60.815	ENSTNIG00000013243	ythdc1	88	64.155	Tetraodon_nigroviridis
ENSNLEG00000009202	YTHDC1	96	84.466	ENSTBEG00000011546	YTHDC1	91	86.527	Tupaia_belangeri
ENSNLEG00000009202	YTHDC1	99	94.925	ENSTTRG00000005083	YTHDC1	99	94.925	Tursiops_truncatus
ENSNLEG00000009202	YTHDC1	94	95.918	ENSUAMG00000010388	YTHDC1	100	95.918	Ursus_americanus
ENSNLEG00000009202	YTHDC1	99	82.645	ENSUMAG00000013668	YTHDC1	98	82.645	Ursus_maritimus
ENSNLEG00000009202	YTHDC1	99	93.664	ENSVPAG00000009040	YTHDC1	99	93.664	Vicugna_pacos
ENSNLEG00000009202	YTHDC1	99	96.982	ENSVVUG00000005387	YTHDC1	100	95.779	Vulpes_vulpes
ENSNLEG00000009202	YTHDC1	97	69.392	ENSXETG00000017960	ythdc1	91	71.576	Xenopus_tropicalis
ENSNLEG00000009202	YTHDC1	71	48.980	ENSXCOG00000000530	ythdc1	87	50.340	Xiphophorus_couchianus
ENSNLEG00000009202	YTHDC1	57	57.812	ENSXMAG00000005196	ythdc1	61	63.288	Xiphophorus_maculatus