EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000009770 (Gene tree)
Gene ID: 100582094
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 24923 bases
Position: chr19:73708281-73733203
Accession: 100582094
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000011902	ResIII	PF04851.15	3.2e-08	1	1
ENSNLEP00000047439	ResIII	PF04851.15	3.2e-08	1	1
ENSNLEP00000032599	ResIII	PF04851.15	3.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000052573	CHD3-204	1146	-	ENSNLEP00000039498	381 (aa)	-	A0A2I3H780
ENSNLET00000053752	CHD3-201	5925	XM_003274544	ENSNLEP00000032599	1974 (aa)	XP_003274592	A0A2I3GMQ6
ENSNLET00000051807	CHD3-202	5724	-	ENSNLEP00000047439	1908 (aa)	-	A0A2I3HV10
ENSNLET00000012484	CHD3-203	5706	-	ENSNLEP00000011902	1902 (aa)	-	G1RFA2

Gene Model

Click here to download ENSNLEG00000009770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000009770's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000009770	CHD3	93	69.611	ENSNLEG00000004330	-	92	68.443
ENSNLEG00000009770	CHD3	90	71.078	ENSNLEG00000010320	CHD5	97	66.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000009770	CHD3	100	96.885	ENSG00000170004	CHD3	99	100.000	Homo_sapiens
ENSNLEG00000009770	CHD3	88	72.888	ENSAPOG00000005614	chd3	92	89.189	Acanthochromis_polyacanthus
ENSNLEG00000009770	CHD3	68	92.749	ENSAMEG00000003025	-	99	92.012	Ailuropoda_melanoleuca
ENSNLEG00000009770	CHD3	82	84.713	ENSACIG00000019671	chd3	97	89.865	Amphilophus_citrinellus
ENSNLEG00000009770	CHD3	91	83.071	ENSAOCG00000023784	chd3	94	89.189	Amphiprion_ocellaris
ENSNLEG00000009770	CHD3	91	83.071	ENSAPEG00000006341	chd3	86	86.122	Amphiprion_percula
ENSNLEG00000009770	CHD3	92	83.071	ENSATEG00000000848	chd3	99	72.440	Anabas_testudineus
ENSNLEG00000009770	CHD3	98	82.958	ENSACAG00000004276	CHD3	95	82.203	Anolis_carolinensis
ENSNLEG00000009770	CHD3	100	91.990	ENSANAG00000034323	CHD3	99	95.225	Aotus_nancymaae
ENSNLEG00000009770	CHD3	98	71.964	ENSACLG00000009222	chd3	98	73.724	Astatotilapia_calliptera
ENSNLEG00000009770	CHD3	100	95.176	ENSBTAG00000014377	CHD3	97	95.729	Bos_taurus
ENSNLEG00000009770	CHD3	100	96.314	ENSCJAG00000014766	CHD3	99	95.560	Callithrix_jacchus
ENSNLEG00000009770	CHD3	100	95.330	ENSCAFG00000016859	CHD3	99	94.458	Canis_familiaris
ENSNLEG00000009770	CHD3	95	94.992	ENSCAFG00020007422	CHD3	98	95.563	Canis_lupus_dingo
ENSNLEG00000009770	CHD3	100	95.537	ENSCHIG00000016737	CHD3	99	94.764	Capra_hircus
ENSNLEG00000009770	CHD3	100	96.108	ENSTSYG00000035658	CHD3	98	96.108	Carlito_syrichta
ENSNLEG00000009770	CHD3	100	93.032	ENSCAPG00000014864	CHD3	99	91.840	Cavia_aperea
ENSNLEG00000009770	CHD3	100	94.966	ENSCPOG00000022653	CHD3	99	93.677	Cavia_porcellus
ENSNLEG00000009770	CHD3	100	96.158	ENSCCAG00000034792	CHD3	99	95.221	Cebus_capucinus
ENSNLEG00000009770	CHD3	100	96.781	ENSCATG00000041717	CHD3	98	96.781	Cercocebus_atys
ENSNLEG00000009770	CHD3	100	95.330	ENSCLAG00000010523	CHD3	98	95.774	Chinchilla_lanigera
ENSNLEG00000009770	CHD3	100	96.002	ENSCSAG00000011122	CHD3	99	95.648	Chlorocebus_sabaeus
ENSNLEG00000009770	CHD3	91	84.032	ENSCPBG00000011966	CHD3	99	85.075	Chrysemys_picta_bellii
ENSNLEG00000009770	CHD3	100	96.677	ENSCANG00000037641	CHD3	98	96.677	Colobus_angolensis_palliatus
ENSNLEG00000009770	CHD3	100	93.932	ENSCGRG00001011306	Chd3	98	94.562	Cricetulus_griseus_chok1gshd
ENSNLEG00000009770	CHD3	94	97.794	ENSCGRG00000007878	Chd3	98	97.794	Cricetulus_griseus_crigri
ENSNLEG00000009770	CHD3	90	82.996	ENSCSEG00000004489	chd3	96	82.996	Cynoglossus_semilaevis
ENSNLEG00000009770	CHD3	87	88.835	ENSCVAG00000007293	chd3	93	88.835	Cyprinodon_variegatus
ENSNLEG00000009770	CHD3	95	75.342	ENSDARG00000021405	chd3	93	85.306	Danio_rerio
ENSNLEG00000009770	CHD3	100	80.424	ENSDNOG00000047846	CHD3	98	79.288	Dasypus_novemcinctus
ENSNLEG00000009770	CHD3	100	94.756	ENSDORG00000010713	Chd3	98	95.349	Dipodomys_ordii
ENSNLEG00000009770	CHD3	100	89.362	ENSETEG00000017733	CHD3	100	89.673	Echinops_telfairi
ENSNLEG00000009770	CHD3	69	76.937	ENSEBUG00000008310	chd3	99	68.827	Eptatretus_burgeri
ENSNLEG00000009770	CHD3	93	95.204	ENSEASG00005019360	CHD3	98	95.485	Equus_asinus_asinus
ENSNLEG00000009770	CHD3	93	95.259	ENSECAG00000010051	CHD3	98	95.541	Equus_caballus
ENSNLEG00000009770	CHD3	91	85.317	ENSEEUG00000015205	CHD3	90	85.714	Erinaceus_europaeus
ENSNLEG00000009770	CHD3	80	88.435	ENSELUG00000019499	chd3	99	88.435	Esox_lucius
ENSNLEG00000009770	CHD3	100	94.966	ENSFCAG00000009629	CHD3	95	94.277	Felis_catus
ENSNLEG00000009770	CHD3	100	92.527	ENSFDAG00000008220	CHD3	99	91.679	Fukomys_damarensis
ENSNLEG00000009770	CHD3	89	78.477	ENSGMOG00000013599	chd3	88	78.883	Gadus_morhua
ENSNLEG00000009770	CHD3	61	74.232	ENSGAFG00000004055	chd3	99	75.901	Gambusia_affinis
ENSNLEG00000009770	CHD3	99	68.948	ENSGACG00000019275	chd3	90	84.082	Gasterosteus_aculeatus
ENSNLEG00000009770	CHD3	76	83.910	ENSGAGG00000013164	CHD3	95	90.000	Gopherus_agassizii
ENSNLEG00000009770	CHD3	100	96.781	ENSGGOG00000013496	CHD3	99	95.817	Gorilla_gorilla
ENSNLEG00000009770	CHD3	100	95.278	ENSHGLG00000012017	CHD3	98	94.589	Heterocephalus_glaber_female
ENSNLEG00000009770	CHD3	89	90.027	ENSHGLG00100013902	CHD3	97	89.099	Heterocephalus_glaber_male
ENSNLEG00000009770	CHD3	95	73.308	ENSHCOG00000010170	chd3	88	85.648	Hippocampus_comes
ENSNLEG00000009770	CHD3	87	78.657	ENSIPUG00000003271	chd3	96	73.741	Ictalurus_punctatus
ENSNLEG00000009770	CHD3	100	95.898	ENSSTOG00000025907	CHD3	98	96.300	Ictidomys_tridecemlineatus
ENSNLEG00000009770	CHD3	100	94.655	ENSJJAG00000017633	Chd3	98	95.298	Jaculus_jaculus
ENSNLEG00000009770	CHD3	89	88.626	ENSKMAG00000019292	chd3	96	74.834	Kryptolebias_marmoratus
ENSNLEG00000009770	CHD3	96	69.157	ENSLBEG00000028485	chd3	94	69.663	Labrus_bergylta
ENSNLEG00000009770	CHD3	99	71.787	ENSLACG00000008031	CHD3	99	72.809	Latimeria_chalumnae
ENSNLEG00000009770	CHD3	98	75.450	ENSLOCG00000013965	chd3	87	87.449	Lepisosteus_oculatus
ENSNLEG00000009770	CHD3	93	95.082	ENSLAFG00000000572	CHD3	100	91.875	Loxodonta_africana
ENSNLEG00000009770	CHD3	100	96.729	ENSMFAG00000020113	CHD3	98	96.729	Macaca_fascicularis
ENSNLEG00000009770	CHD3	100	94.204	ENSMMUG00000022221	CHD3	98	94.172	Macaca_mulatta
ENSNLEG00000009770	CHD3	100	96.729	ENSMNEG00000001728	CHD3	98	96.729	Macaca_nemestrina
ENSNLEG00000009770	CHD3	100	96.781	ENSMLEG00000032249	CHD3	98	96.781	Mandrillus_leucophaeus
ENSNLEG00000009770	CHD3	88	73.318	ENSMAMG00000000564	chd3	92	89.189	Mastacembelus_armatus
ENSNLEG00000009770	CHD3	100	93.672	ENSMAUG00000013873	Chd3	98	92.450	Mesocricetus_auratus
ENSNLEG00000009770	CHD3	100	95.745	ENSMICG00000008741	CHD3	99	91.675	Microcebus_murinus
ENSNLEG00000009770	CHD3	99	94.075	ENSMOCG00000004848	Chd3	98	94.706	Microtus_ochrogaster
ENSNLEG00000009770	CHD3	98	72.331	ENSMMOG00000012699	chd3	99	72.451	Mola_mola
ENSNLEG00000009770	CHD3	93	90.050	ENSMODG00000007509	CHD3	98	91.875	Monodelphis_domestica
ENSNLEG00000009770	CHD3	100	94.035	MGP_CAROLIEiJ_G0016564	Chd3	100	94.274	Mus_caroli
ENSNLEG00000009770	CHD3	100	94.139	ENSMUSG00000018474	Chd3	99	94.592	Mus_musculus
ENSNLEG00000009770	CHD3	100	94.395	MGP_PahariEiJ_G0017695	Chd3	100	94.854	Mus_pahari
ENSNLEG00000009770	CHD3	100	94.139	MGP_SPRETEiJ_G0017400	Chd3	100	94.592	Mus_spretus
ENSNLEG00000009770	CHD3	87	94.624	ENSMPUG00000008861	CHD3	99	93.890	Mustela_putorius_furo
ENSNLEG00000009770	CHD3	100	94.502	ENSMLUG00000014643	-	99	93.363	Myotis_lucifugus
ENSNLEG00000009770	CHD3	100	94.707	ENSNGAG00000000773	Chd3	98	93.411	Nannospalax_galili
ENSNLEG00000009770	CHD3	88	73.656	ENSNBRG00000000636	chd3	98	74.131	Neolamprologus_brichardi
ENSNLEG00000009770	CHD3	86	91.078	ENSMEUG00000005852	CHD3	87	90.614	Notamacropus_eugenii
ENSNLEG00000009770	CHD3	95	94.105	ENSOPRG00000011069	CHD3	99	93.215	Ochotona_princeps
ENSNLEG00000009770	CHD3	100	94.862	ENSODEG00000017785	CHD3	99	93.630	Octodon_degus
ENSNLEG00000009770	CHD3	78	76.234	ENSONIG00000009292	chd3	100	73.502	Oreochromis_niloticus
ENSNLEG00000009770	CHD3	99	90.649	ENSOCUG00000029299	CHD3	99	90.051	Oryctolagus_cuniculus
ENSNLEG00000009770	CHD3	77	74.314	ENSORLG00000007107	chd3	87	74.782	Oryzias_latipes
ENSNLEG00000009770	CHD3	59	72.222	ENSORLG00020008387	chd3	95	73.339	Oryzias_latipes_hni
ENSNLEG00000009770	CHD3	73	78.872	ENSOMEG00000013691	chd3	99	76.404	Oryzias_melastigma
ENSNLEG00000009770	CHD3	100	95.174	ENSOGAG00000003216	CHD3	99	94.382	Otolemur_garnettii
ENSNLEG00000009770	CHD3	100	92.591	ENSOARG00000017855	CHD3	99	92.335	Ovis_aries
ENSNLEG00000009770	CHD3	100	94.629	ENSPPAG00000032886	CHD3	99	93.741	Pan_paniscus
ENSNLEG00000009770	CHD3	100	95.174	ENSPPRG00000000626	CHD3	99	94.052	Panthera_pardus
ENSNLEG00000009770	CHD3	100	96.937	ENSPTRG00000008714	CHD3	99	95.968	Pan_troglodytes
ENSNLEG00000009770	CHD3	100	96.210	ENSPANG00000023938	CHD3	99	95.716	Papio_anubis
ENSNLEG00000009770	CHD3	99	74.156	ENSPKIG00000006305	chd3	98	77.733	Paramormyrops_kingsleyae
ENSNLEG00000009770	CHD3	57	89.872	ENSPSIG00000010177	CHD3	98	90.476	Pelodiscus_sinensis
ENSNLEG00000009770	CHD3	100	93.828	ENSPEMG00000014262	Chd3	98	93.827	Peromyscus_maniculatus_bairdii
ENSNLEG00000009770	CHD3	100	90.437	ENSPCIG00000005442	CHD3	97	93.797	Phascolarctos_cinereus
ENSNLEG00000009770	CHD3	91	83.071	ENSPFOG00000012464	chd3	85	86.122	Poecilia_formosa
ENSNLEG00000009770	CHD3	88	89.756	ENSPLAG00000002887	chd3	93	89.756	Poecilia_latipinna
ENSNLEG00000009770	CHD3	55	80.442	ENSPMEG00000016725	chd3	94	72.719	Poecilia_mexicana
ENSNLEG00000009770	CHD3	91	86.122	ENSPREG00000011044	chd3	96	86.122	Poecilia_reticulata
ENSNLEG00000009770	CHD3	98	93.224	ENSPPYG00000007940	CHD3	99	90.845	Pongo_abelii
ENSNLEG00000009770	CHD3	96	97.761	ENSPCAG00000004350	CHD3	96	97.201	Procavia_capensis
ENSNLEG00000009770	CHD3	100	95.693	ENSPCOG00000020952	CHD3	99	94.221	Propithecus_coquereli
ENSNLEG00000009770	CHD3	87	94.952	ENSPVAG00000016344	CHD3	86	94.571	Pteropus_vampyrus
ENSNLEG00000009770	CHD3	92	81.496	ENSPNAG00000020393	chd3	96	84.490	Pygocentrus_nattereri
ENSNLEG00000009770	CHD3	93	93.255	ENSRNOG00000009722	Chd3	99	92.794	Rattus_norvegicus
ENSNLEG00000009770	CHD3	100	93.644	ENSRBIG00000033562	CHD3	99	92.782	Rhinopithecus_bieti
ENSNLEG00000009770	CHD3	100	96.781	ENSRROG00000029554	CHD3	98	96.781	Rhinopithecus_roxellana
ENSNLEG00000009770	CHD3	100	96.417	ENSSBOG00000020719	CHD3	98	96.417	Saimiri_boliviensis_boliviensis
ENSNLEG00000009770	CHD3	98	92.418	ENSSHAG00000014412	CHD3	98	92.418	Sarcophilus_harrisii
ENSNLEG00000009770	CHD3	88	78.781	ENSSFOG00015023123	chd3	98	72.434	Scleropages_formosus
ENSNLEG00000009770	CHD3	83	89.189	ENSSMAG00000006451	chd3	92	89.189	Scophthalmus_maximus
ENSNLEG00000009770	CHD3	57	71.844	ENSSDUG00000005792	chd3	95	72.936	Seriola_dumerili
ENSNLEG00000009770	CHD3	91	83.071	ENSSPAG00000013694	chd3	95	89.189	Stegastes_partitus
ENSNLEG00000009770	CHD3	100	95.280	ENSSSCG00000021363	CHD3	99	95.570	Sus_scrofa
ENSNLEG00000009770	CHD3	77	75.282	ENSTRUG00000014990	chd3	89	75.198	Takifugu_rubripes
ENSNLEG00000009770	CHD3	98	71.697	ENSTNIG00000012998	chd3	98	72.112	Tetraodon_nigroviridis
ENSNLEG00000009770	CHD3	66	97.619	ENSTBEG00000011454	-	71	97.619	Tupaia_belangeri
ENSNLEG00000009770	CHD3	98	99.361	ENSTTRG00000010295	CHD3	95	99.383	Tursiops_truncatus
ENSNLEG00000009770	CHD3	93	93.934	ENSUAMG00000005475	CHD3	99	93.205	Ursus_americanus
ENSNLEG00000009770	CHD3	57	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSNLEG00000009770	CHD3	98	95.228	ENSVVUG00000028011	CHD3	98	94.424	Vulpes_vulpes
ENSNLEG00000009770	CHD3	98	71.103	ENSXETG00000012991	chd3	86	81.633	Xenopus_tropicalis
ENSNLEG00000009770	CHD3	53	81.962	ENSXCOG00000000809	chd3	96	82.187	Xiphophorus_couchianus
ENSNLEG00000009770	CHD3	80	89.189	ENSXMAG00000016035	chd3	98	89.189	Xiphophorus_maculatus