EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000009916 (Gene tree)
Gene ID: 100597914
Gene Symbol: SRSF4
Alias: SFRS4|SRP75
Full Name: serine and arginine rich splicing factor 4
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 41133 bases
Position: chr24:27960897-28002029
Accession: 100597914
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000012090	RRM_1	PF00076.22	3.9e-31	1	2
ENSNLEP00000012090	RRM_1	PF00076.22	3.9e-31	2	2
ENSNLEP00000037135	RRM_1	PF00076.22	6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000012682	SRSF4-201	2526	XM_003271722	ENSNLEP00000012090	494 (aa)	XP_003271770	G1RFU0
ENSNLET00000050297	SRSF4-202	483	-	ENSNLEP00000037135	160 (aa)	-	A0A2I3H0U8

Gene Model

Click here to download ENSNLEG00000009916's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03040	Spliceosome	KEGG
nle05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000009916's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000009916	SRSF4	100	98.988	ENSG00000116350	SRSF4	100	98.988	Homo_sapiens
ENSNLEG00000009916	SRSF4	92	81.169	ENSAMEG00000000594	SRSF4	92	87.446	Ailuropoda_melanoleuca
ENSNLEG00000009916	SRSF4	85	71.599	ENSAPLG00000006595	-	57	83.465	Anas_platyrhynchos
ENSNLEG00000009916	SRSF4	99	98.113	ENSANAG00000037134	SRSF4	99	98.113	Aotus_nancymaae
ENSNLEG00000009916	SRSF4	92	90.239	ENSBTAG00000013309	SRSF4	92	88.720	Bos_taurus
ENSNLEG00000009916	SRSF4	99	98.113	ENSCJAG00000047192	SRSF4	99	98.113	Callithrix_jacchus
ENSNLEG00000009916	SRSF4	85	88.372	ENSCAFG00000011669	SRSF4	90	87.442	Canis_familiaris
ENSNLEG00000009916	SRSF4	85	89.486	ENSCAFG00020023963	SRSF4	88	88.679	Canis_lupus_dingo
ENSNLEG00000009916	SRSF4	95	86.275	ENSCHIG00000022096	SRSF4	99	86.275	Capra_hircus
ENSNLEG00000009916	SRSF4	99	92.453	ENSTSYG00000007903	SRSF4	99	92.453	Carlito_syrichta
ENSNLEG00000009916	SRSF4	92	79.431	ENSCAPG00000014747	SRSF4	91	79.341	Cavia_aperea
ENSNLEG00000009916	SRSF4	93	83.405	ENSCPOG00000036234	SRSF4	92	85.065	Cavia_porcellus
ENSNLEG00000009916	SRSF4	99	98.113	ENSCCAG00000033585	SRSF4	99	98.113	Cebus_capucinus
ENSNLEG00000009916	SRSF4	100	98.785	ENSCATG00000031440	SRSF4	100	98.785	Cercocebus_atys
ENSNLEG00000009916	SRSF4	93	87.446	ENSCLAG00000009008	SRSF4	92	86.739	Chinchilla_lanigera
ENSNLEG00000009916	SRSF4	100	99.393	ENSCSAG00000001022	SRSF4	100	99.393	Chlorocebus_sabaeus
ENSNLEG00000009916	SRSF4	85	86.256	ENSCHOG00000013858	SRSF4	92	86.730	Choloepus_hoffmanni
ENSNLEG00000009916	SRSF4	68	84.273	ENSCPBG00000009020	SRSF4	65	91.104	Chrysemys_picta_bellii
ENSNLEG00000009916	SRSF4	100	99.393	ENSCANG00000028667	SRSF4	100	99.393	Colobus_angolensis_palliatus
ENSNLEG00000009916	SRSF4	93	77.970	ENSCGRG00001021115	Srsf4	92	83.406	Cricetulus_griseus_chok1gshd
ENSNLEG00000009916	SRSF4	50	97.200	ENSCGRG00000014137	Srsf4	91	81.991	Cricetulus_griseus_crigri
ENSNLEG00000009916	SRSF4	92	85.106	ENSDNOG00000047961	SRSF4	64	96.615	Dasypus_novemcinctus
ENSNLEG00000009916	SRSF4	92	80.828	ENSDORG00000002459	Srsf4	92	78.649	Dipodomys_ordii
ENSNLEG00000009916	SRSF4	92	94.372	ENSEASG00005010168	SRSF4	92	94.372	Equus_asinus_asinus
ENSNLEG00000009916	SRSF4	92	94.372	ENSECAG00000021350	SRSF4	92	94.372	Equus_caballus
ENSNLEG00000009916	SRSF4	92	90.769	ENSEEUG00000008479	SRSF4	92	89.670	Erinaceus_europaeus
ENSNLEG00000009916	SRSF4	92	93.187	ENSFCAG00000027821	SRSF4	92	92.088	Felis_catus
ENSNLEG00000009916	SRSF4	92	69.890	ENSFALG00000001346	SRSF4	60	85.121	Ficedula_albicollis
ENSNLEG00000009916	SRSF4	88	75.399	ENSFDAG00000007332	SRSF4	92	83.294	Fukomys_damarensis
ENSNLEG00000009916	SRSF4	92	73.246	ENSGALG00000050314	SRSF4	61	85.172	Gallus_gallus
ENSNLEG00000009916	SRSF4	68	83.136	ENSGAGG00000014836	SRSF4	65	90.798	Gopherus_agassizii
ENSNLEG00000009916	SRSF4	100	99.190	ENSGGOG00000002444	SRSF4	100	99.190	Gorilla_gorilla
ENSNLEG00000009916	SRSF4	95	87.234	ENSHGLG00000011842	SRSF4	92	85.683	Heterocephalus_glaber_female
ENSNLEG00000009916	SRSF4	95	87.234	ENSHGLG00100017279	SRSF4	92	85.683	Heterocephalus_glaber_male
ENSNLEG00000009916	SRSF4	59	89.394	ENSHCOG00000012540	srsf4	68	82.065	Hippocampus_comes
ENSNLEG00000009916	SRSF4	92	91.087	ENSSTOG00000015908	SRSF4	92	91.087	Ictidomys_tridecemlineatus
ENSNLEG00000009916	SRSF4	61	77.228	ENSJJAG00000022153	Srsf4	92	74.728	Jaculus_jaculus
ENSNLEG00000009916	SRSF4	85	95.932	ENSLAFG00000002575	SRSF4	86	89.450	Loxodonta_africana
ENSNLEG00000009916	SRSF4	100	99.393	ENSMFAG00000041784	SRSF4	100	99.393	Macaca_fascicularis
ENSNLEG00000009916	SRSF4	99	99.371	ENSMMUG00000007110	SRSF4	99	99.371	Macaca_mulatta
ENSNLEG00000009916	SRSF4	100	99.393	ENSMNEG00000034931	SRSF4	100	99.393	Macaca_nemestrina
ENSNLEG00000009916	SRSF4	100	98.988	ENSMLEG00000031619	SRSF4	100	98.988	Mandrillus_leucophaeus
ENSNLEG00000009916	SRSF4	92	73.246	ENSMGAG00000002400	SRSF4	61	85.517	Meleagris_gallopavo
ENSNLEG00000009916	SRSF4	93	86.825	ENSMAUG00000021940	Srsf4	92	84.649	Mesocricetus_auratus
ENSNLEG00000009916	SRSF4	100	95.808	ENSMICG00000043567	SRSF4	100	95.808	Microcebus_murinus
ENSNLEG00000009916	SRSF4	93	83.406	ENSMOCG00000013319	Srsf4	92	84.061	Microtus_ochrogaster
ENSNLEG00000009916	SRSF4	58	65.333	ENSMMOG00000013653	srsf4	65	80.226	Mola_mola
ENSNLEG00000009916	SRSF4	62	91.909	ENSMODG00000011052	SRSF4	90	95.172	Monodelphis_domestica
ENSNLEG00000009916	SRSF4	93	83.117	MGP_CAROLIEiJ_G0026555	Srsf4	92	84.245	Mus_caroli
ENSNLEG00000009916	SRSF4	93	84.632	ENSMUSG00000028911	Srsf4	92	84.649	Mus_musculus
ENSNLEG00000009916	SRSF4	93	86.245	MGP_PahariEiJ_G0028887	Srsf4	92	86.184	Mus_pahari
ENSNLEG00000009916	SRSF4	93	83.333	MGP_SPRETEiJ_G0027535	Srsf4	92	83.772	Mus_spretus
ENSNLEG00000009916	SRSF4	92	87.716	ENSMPUG00000015470	SRSF4	92	88.362	Mustela_putorius_furo
ENSNLEG00000009916	SRSF4	58	96.864	ENSMLUG00000014770	SRSF4	92	87.174	Myotis_lucifugus
ENSNLEG00000009916	SRSF4	92	86.623	ENSNGAG00000012225	Srsf4	92	85.965	Nannospalax_galili
ENSNLEG00000009916	SRSF4	61	100.000	ENSMEUG00000003045	-	68	100.000	Notamacropus_eugenii
ENSNLEG00000009916	SRSF4	92	88.377	ENSOPRG00000010098	SRSF4	93	87.500	Ochotona_princeps
ENSNLEG00000009916	SRSF4	67	89.189	ENSODEG00000003230	SRSF4	92	84.698	Octodon_degus
ENSNLEG00000009916	SRSF4	92	88.261	ENSOCUG00000001837	SRSF4	93	86.304	Oryctolagus_cuniculus
ENSNLEG00000009916	SRSF4	92	94.298	ENSOGAG00000015515	SRSF4	92	93.202	Otolemur_garnettii
ENSNLEG00000009916	SRSF4	53	86.038	ENSOARG00000002451	SRSF4	50	94.702	Ovis_aries
ENSNLEG00000009916	SRSF4	100	99.190	ENSPPAG00000028357	SRSF4	100	99.190	Pan_paniscus
ENSNLEG00000009916	SRSF4	92	93.187	ENSPPRG00000016248	SRSF4	92	92.088	Panthera_pardus
ENSNLEG00000009916	SRSF4	100	99.190	ENSPTRG00000000445	SRSF4	100	99.190	Pan_troglodytes
ENSNLEG00000009916	SRSF4	100	98.988	ENSPANG00000021937	SRSF4	100	98.988	Papio_anubis
ENSNLEG00000009916	SRSF4	88	80.963	ENSPEMG00000003365	Srsf4	91	81.948	Peromyscus_maniculatus_bairdii
ENSNLEG00000009916	SRSF4	100	98.988	ENSPPYG00000001629	SRSF4	100	98.988	Pongo_abelii
ENSNLEG00000009916	SRSF4	92	88.132	ENSPCAG00000009879	SRSF4	92	89.011	Procavia_capensis
ENSNLEG00000009916	SRSF4	100	96.364	ENSPCOG00000027341	SRSF4	99	90.184	Propithecus_coquereli
ENSNLEG00000009916	SRSF4	67	79.167	ENSPVAG00000012500	SRSF4	67	79.167	Pteropus_vampyrus
ENSNLEG00000009916	SRSF4	56	65.591	ENSPNYG00000003796	srsf4	56	85.635	Pundamilia_nyererei
ENSNLEG00000009916	SRSF4	53	71.212	ENSPNAG00000023844	srsf4	53	83.616	Pygocentrus_nattereri
ENSNLEG00000009916	SRSF4	66	94.769	ENSRNOG00000010007	Srsf4	92	84.649	Rattus_norvegicus
ENSNLEG00000009916	SRSF4	100	99.393	ENSRBIG00000035789	SRSF4	100	99.393	Rhinopithecus_bieti
ENSNLEG00000009916	SRSF4	100	99.393	ENSRROG00000029463	SRSF4	100	99.393	Rhinopithecus_roxellana
ENSNLEG00000009916	SRSF4	100	97.000	ENSSBOG00000027098	SRSF4	100	97.000	Saimiri_boliviensis_boliviensis
ENSNLEG00000009916	SRSF4	57	90.426	ENSSHAG00000012407	SRSF4	100	88.699	Sarcophilus_harrisii
ENSNLEG00000009916	SRSF4	56	68.727	ENSSDUG00000007387	srsf4	54	87.571	Seriola_dumerili
ENSNLEG00000009916	SRSF4	50	74.494	ENSSARG00000001277	SRSF4	52	81.435	Sorex_araneus
ENSNLEG00000009916	SRSF4	63	86.120	ENSSPUG00000015318	-	67	84.404	Sphenodon_punctatus
ENSNLEG00000009916	SRSF4	96	90.546	ENSSSCG00000003589	SRSF4	94	90.810	Sus_scrofa
ENSNLEG00000009916	SRSF4	85	73.050	ENSTGUG00000000765	SRSF4	57	83.004	Taeniopygia_guttata
ENSNLEG00000009916	SRSF4	52	68.364	ENSTRUG00000011891	srsf4	62	80.729	Takifugu_rubripes
ENSNLEG00000009916	SRSF4	92	92.088	ENSTTRG00000002572	SRSF4	92	92.088	Tursiops_truncatus
ENSNLEG00000009916	SRSF4	92	90.065	ENSUAMG00000006106	SRSF4	92	89.542	Ursus_americanus
ENSNLEG00000009916	SRSF4	85	89.252	ENSVVUG00000012690	SRSF4	90	87.850	Vulpes_vulpes