EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000010017 (Gene tree)
Gene ID: 100606915
Gene Symbol: -
Alias: -
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 2494257 bases
Position: chr18:97296269-99790525
Accession: 100606915
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000040787	Fox-1_C	PF12414.8	1e-42	1	1
ENSNLEP00000044108	Fox-1_C	PF12414.8	1.7e-42	1	1
ENSNLEP00000012215	Fox-1_C	PF12414.8	1.8e-40	1	1
ENSNLEP00000041428	Fox-1_C	PF12414.8	5e-40	1	1
ENSNLEP00000040787	RRM_1	PF00076.22	4.1e-18	1	1
ENSNLEP00000012215	RRM_1	PF00076.22	4.3e-18	1	1
ENSNLEP00000044108	RRM_1	PF00076.22	4.8e-18	1	1
ENSNLEP00000041428	RRM_1	PF00076.22	7.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000053815	-	1128	XM_012497397	ENSNLEP00000040787	375 (aa)	XP_012352851	A0A2I3HBB5
ENSNLET00000053225	-	1749	-	ENSNLEP00000041428	582 (aa)	-	A0A2I3HCP8
ENSNLET00000045447	-	1275	XM_012497396	ENSNLEP00000044108	424 (aa)	XP_012352850	A0A2I3HKC6
ENSNLET00000012812	-	1257	XM_003269246	ENSNLEP00000012215	418 (aa)	XP_003269294	G1RG65

Gene Model

Click here to download ENSNLEG00000010017's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000010017's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000010017	-	97	62.990	ENSNLEG00000034979	RBFOX2	96	65.508
ENSNLEG00000010017	-	51	72.500	ENSNLEG00000000153	-	72	72.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000010017	-	100	99.761	ENSG00000078328	RBFOX1	100	99.761	Homo_sapiens
ENSNLEG00000010017	-	97	81.053	ENSAPOG00000003197	rbfox1	98	81.102	Acanthochromis_polyacanthus
ENSNLEG00000010017	-	61	96.957	ENSAMEG00000008605	RBFOX1	100	95.600	Ailuropoda_melanoleuca
ENSNLEG00000010017	-	64	71.004	ENSACIG00000005478	rbfox1	68	71.004	Amphilophus_citrinellus
ENSNLEG00000010017	-	70	77.857	ENSAOCG00000008283	rbfox1	96	77.500	Amphiprion_ocellaris
ENSNLEG00000010017	-	93	71.117	ENSAPEG00000010636	rbfox1	100	71.003	Amphiprion_percula
ENSNLEG00000010017	-	70	76.056	ENSATEG00000007513	rbfox1	97	75.352	Anabas_testudineus
ENSNLEG00000010017	-	94	92.347	ENSAPLG00000013263	RBFOX1	98	92.347	Anas_platyrhynchos
ENSNLEG00000010017	-	97	84.694	ENSACAG00000004013	RBFOX1	98	85.751	Anolis_carolinensis
ENSNLEG00000010017	-	100	99.200	ENSANAG00000029527	RBFOX1	100	99.200	Aotus_nancymaae
ENSNLEG00000010017	-	58	89.041	ENSAMXG00000002431	rbfox1	64	89.041	Astyanax_mexicanus
ENSNLEG00000010017	-	93	98.205	ENSBTAG00000007210	RBFOX1	98	98.205	Bos_taurus
ENSNLEG00000010017	-	100	98.804	ENSCJAG00000017351	RBFOX1	100	98.804	Callithrix_jacchus
ENSNLEG00000010017	-	100	98.565	ENSCAFG00000019082	RBFOX1	100	98.565	Canis_familiaris
ENSNLEG00000010017	-	71	98.649	ENSCAFG00020024881	RBFOX1	83	98.649	Canis_lupus_dingo
ENSNLEG00000010017	-	93	98.205	ENSCHIG00000023549	RBFOX1	98	98.205	Capra_hircus
ENSNLEG00000010017	-	96	98.892	ENSTSYG00000005334	RBFOX1	100	98.972	Carlito_syrichta
ENSNLEG00000010017	-	100	97.129	ENSCAPG00000017669	RBFOX1	100	97.129	Cavia_aperea
ENSNLEG00000010017	-	100	97.129	ENSCPOG00000011314	RBFOX1	100	97.129	Cavia_porcellus
ENSNLEG00000010017	-	100	99.282	ENSCCAG00000023031	RBFOX1	100	99.299	Cebus_capucinus
ENSNLEG00000010017	-	100	99.761	ENSCATG00000033816	RBFOX1	100	99.761	Cercocebus_atys
ENSNLEG00000010017	-	100	97.608	ENSCLAG00000012761	RBFOX1	100	97.608	Chinchilla_lanigera
ENSNLEG00000010017	-	79	96.716	ENSCSAG00000008739	RBFOX1	98	98.649	Chlorocebus_sabaeus
ENSNLEG00000010017	-	100	76.077	ENSCHOG00000012843	RBFOX1	100	76.077	Choloepus_hoffmanni
ENSNLEG00000010017	-	97	95.055	ENSCPBG00000026626	RBFOX1	98	94.359	Chrysemys_picta_bellii
ENSNLEG00000010017	-	100	99.761	ENSCANG00000033125	RBFOX1	100	99.761	Colobus_angolensis_palliatus
ENSNLEG00000010017	-	100	97.368	ENSCGRG00001013729	Rbfox1	100	97.368	Cricetulus_griseus_chok1gshd
ENSNLEG00000010017	-	100	97.368	ENSCGRG00000003272	Rbfox1	100	97.368	Cricetulus_griseus_crigri
ENSNLEG00000010017	-	93	76.486	ENSCSEG00000008840	rbfox1	100	76.486	Cynoglossus_semilaevis
ENSNLEG00000010017	-	97	88.154	ENSDARG00000014746	rbfox1	99	87.912	Danio_rerio
ENSNLEG00000010017	-	96	93.797	ENSDNOG00000043612	RBFOX1	96	93.797	Dasypus_novemcinctus
ENSNLEG00000010017	-	93	93.639	ENSDORG00000010024	Rbfox1	100	93.059	Dipodomys_ordii
ENSNLEG00000010017	-	100	78.947	ENSETEG00000003771	RBFOX1	100	78.947	Echinops_telfairi
ENSNLEG00000010017	-	97	98.519	ENSEASG00005011599	RBFOX1	98	98.974	Equus_asinus_asinus
ENSNLEG00000010017	-	97	98.272	ENSECAG00000012667	RBFOX1	98	98.272	Equus_caballus
ENSNLEG00000010017	-	83	73.832	ENSELUG00000013096	rbfox1	99	72.430	Esox_lucius
ENSNLEG00000010017	-	97	98.352	ENSFCAG00000025322	RBFOX1	99	98.065	Felis_catus
ENSNLEG00000010017	-	78	92.492	ENSFALG00000004027	RBFOX1	100	92.492	Ficedula_albicollis
ENSNLEG00000010017	-	100	97.608	ENSFDAG00000007388	RBFOX1	100	97.608	Fukomys_damarensis
ENSNLEG00000010017	-	100	93.062	ENSGALG00000034325	RBFOX1	100	93.062	Gallus_gallus
ENSNLEG00000010017	-	100	92.584	ENSGAGG00000023681	RBFOX1	100	92.593	Gopherus_agassizii
ENSNLEG00000010017	-	100	99.761	ENSGGOG00000016871	-	100	99.761	Gorilla_gorilla
ENSNLEG00000010017	-	100	97.368	ENSHGLG00000016944	RBFOX1	100	97.368	Heterocephalus_glaber_female
ENSNLEG00000010017	-	100	97.368	ENSHGLG00100003272	RBFOX1	100	97.368	Heterocephalus_glaber_male
ENSNLEG00000010017	-	83	76.250	ENSHCOG00000016419	rbfox1	91	76.250	Hippocampus_comes
ENSNLEG00000010017	-	93	90.571	ENSIPUG00000015215	rbfox1	100	90.571	Ictalurus_punctatus
ENSNLEG00000010017	-	100	96.651	ENSSTOG00000000322	RBFOX1	100	96.651	Ictidomys_tridecemlineatus
ENSNLEG00000010017	-	100	94.258	ENSJJAG00000002575	Rbfox1	100	94.258	Jaculus_jaculus
ENSNLEG00000010017	-	93	78.261	ENSLBEG00000014659	rbfox1	97	78.261	Labrus_bergylta
ENSNLEG00000010017	-	97	86.294	ENSLOCG00000006675	rbfox1	99	86.294	Lepisosteus_oculatus
ENSNLEG00000010017	-	74	99.026	ENSLAFG00000011480	RBFOX1	100	99.026	Loxodonta_africana
ENSNLEG00000010017	-	100	99.522	ENSMFAG00000036447	RBFOX1	100	99.522	Macaca_fascicularis
ENSNLEG00000010017	-	100	99.522	ENSMMUG00000003458	RBFOX1	100	99.522	Macaca_mulatta
ENSNLEG00000010017	-	100	99.522	ENSMNEG00000032034	RBFOX1	100	99.522	Macaca_nemestrina
ENSNLEG00000010017	-	100	99.761	ENSMLEG00000015382	RBFOX1	100	99.761	Mandrillus_leucophaeus
ENSNLEG00000010017	-	93	80.274	ENSMAMG00000003142	rbfox1	100	80.822	Mastacembelus_armatus
ENSNLEG00000010017	-	68	88.421	ENSMGAG00000008606	RBFOX1	96	88.214	Meleagris_gallopavo
ENSNLEG00000010017	-	95	54.301	ENSMAUG00000020570	Rbfox1	96	55.699	Mesocricetus_auratus
ENSNLEG00000010017	-	100	98.667	ENSMICG00000034286	RBFOX1	100	98.667	Microcebus_murinus
ENSNLEG00000010017	-	100	97.368	ENSMOCG00000020932	Rbfox1	100	97.368	Microtus_ochrogaster
ENSNLEG00000010017	-	84	76.730	ENSMMOG00000009716	rbfox1	86	77.564	Mola_mola
ENSNLEG00000010017	-	75	95.298	ENSMODG00000005826	RBFOX1	100	97.458	Monodelphis_domestica
ENSNLEG00000010017	-	97	81.649	ENSMALG00000003337	rbfox1	98	81.333	Monopterus_albus
ENSNLEG00000010017	-	100	97.608	MGP_CAROLIEiJ_G0020427	Rbfox1	100	97.608	Mus_caroli
ENSNLEG00000010017	-	100	97.368	ENSMUSG00000008658	Rbfox1	100	99.248	Mus_musculus
ENSNLEG00000010017	-	100	97.608	MGP_PahariEiJ_G0016135	Rbfox1	100	97.608	Mus_pahari
ENSNLEG00000010017	-	100	97.129	MGP_SPRETEiJ_G0021321	Rbfox1	100	97.129	Mus_spretus
ENSNLEG00000010017	-	86	94.722	ENSMPUG00000014822	RBFOX1	93	98.365	Mustela_putorius_furo
ENSNLEG00000010017	-	74	96.753	ENSMLUG00000015896	RBFOX1	100	96.753	Myotis_lucifugus
ENSNLEG00000010017	-	100	97.847	ENSNGAG00000023276	Rbfox1	100	97.847	Nannospalax_galili
ENSNLEG00000010017	-	100	61.190	ENSNBRG00000011084	rbfox1	98	61.190	Neolamprologus_brichardi
ENSNLEG00000010017	-	100	80.383	ENSMEUG00000012525	RBFOX1	100	80.383	Notamacropus_eugenii
ENSNLEG00000010017	-	88	96.957	ENSOPRG00000006199	-	100	80.144	Ochotona_princeps
ENSNLEG00000010017	-	100	96.890	ENSODEG00000013166	RBFOX1	100	96.890	Octodon_degus
ENSNLEG00000010017	-	79	93.134	ENSOANG00000002379	RBFOX1	98	95.405	Ornithorhynchus_anatinus
ENSNLEG00000010017	-	58	95.872	ENSOCUG00000001205	-	100	93.778	Oryctolagus_cuniculus
ENSNLEG00000010017	-	94	96.931	ENSOGAG00000025535	RBFOX1	98	96.931	Otolemur_garnettii
ENSNLEG00000010017	-	59	85.600	ENSOARG00000005135	RBFOX1	99	85.600	Ovis_aries
ENSNLEG00000010017	-	100	98.797	ENSPPAG00000036238	-	100	99.723	Pan_paniscus
ENSNLEG00000010017	-	100	98.400	ENSPPRG00000006546	RBFOX1	100	98.400	Panthera_pardus
ENSNLEG00000010017	-	96	85.095	ENSPTIG00000021154	RBFOX1	99	84.741	Panthera_tigris_altaica
ENSNLEG00000010017	-	100	99.761	ENSPTRG00000007744	RBFOX1	100	99.761	Pan_troglodytes
ENSNLEG00000010017	-	100	99.761	ENSPANG00000026500	RBFOX1	100	99.761	Papio_anubis
ENSNLEG00000010017	-	71	93.233	ENSPKIG00000019353	rbfox1	86	92.830	Paramormyrops_kingsleyae
ENSNLEG00000010017	-	97	88.767	ENSPKIG00000009667	-	95	90.323	Paramormyrops_kingsleyae
ENSNLEG00000010017	-	93	92.564	ENSPSIG00000006523	RBFOX1	97	92.564	Pelodiscus_sinensis
ENSNLEG00000010017	-	100	97.608	ENSPEMG00000017607	Rbfox1	100	97.608	Peromyscus_maniculatus_bairdii
ENSNLEG00000010017	-	70	91.126	ENSPCIG00000026887	RBFOX1	100	91.438	Phascolarctos_cinereus
ENSNLEG00000010017	-	86	95.833	ENSPPYG00000007079	-	93	99.183	Pongo_abelii
ENSNLEG00000010017	-	90	89.153	ENSPCAG00000002630	RBFOX1	100	89.153	Procavia_capensis
ENSNLEG00000010017	-	100	98.804	ENSPCOG00000025687	RBFOX1	100	98.804	Propithecus_coquereli
ENSNLEG00000010017	-	100	93.780	ENSPVAG00000013467	RBFOX1	100	93.780	Pteropus_vampyrus
ENSNLEG00000010017	-	93	87.568	ENSPNAG00000023109	rbfox1	100	87.568	Pygocentrus_nattereri
ENSNLEG00000010017	-	100	94.976	ENSRNOG00000002827	Rbfox1	100	94.976	Rattus_norvegicus
ENSNLEG00000010017	-	96	99.723	ENSRBIG00000044478	RBFOX1	100	99.758	Rhinopithecus_bieti
ENSNLEG00000010017	-	100	99.761	ENSRROG00000044411	RBFOX1	100	99.761	Rhinopithecus_roxellana
ENSNLEG00000010017	-	100	98.667	ENSSBOG00000033726	RBFOX1	100	98.667	Saimiri_boliviensis_boliviensis
ENSNLEG00000010017	-	97	89.744	ENSSHAG00000009257	RBFOX1	98	91.049	Sarcophilus_harrisii
ENSNLEG00000010017	-	97	77.072	ENSSFOG00015023675	rbfox1	97	86.667	Scleropages_formosus
ENSNLEG00000010017	-	89	73.469	ENSSFOG00015009955	-	87	73.469	Scleropages_formosus
ENSNLEG00000010017	-	97	82.152	ENSSMAG00000015505	rbfox1	93	81.890	Scophthalmus_maximus
ENSNLEG00000010017	-	97	79.348	ENSSDUG00000016413	rbfox1	99	79.452	Seriola_dumerili
ENSNLEG00000010017	-	83	78.275	ENSSLDG00000009353	rbfox1	95	77.815	Seriola_lalandi_dorsalis
ENSNLEG00000010017	-	83	89.457	ENSSPUG00000009732	RBFOX1	87	89.457	Sphenodon_punctatus
ENSNLEG00000010017	-	100	77.778	ENSSPAG00000009723	rbfox1	100	80.739	Stegastes_partitus
ENSNLEG00000010017	-	97	97.778	ENSSSCG00000007917	RBFOX1	100	98.588	Sus_scrofa
ENSNLEG00000010017	-	93	92.564	ENSTGUG00000004562	RBFOX1	100	92.564	Taeniopygia_guttata
ENSNLEG00000010017	-	97	80.475	ENSTRUG00000020940	rbfox1	99	80.739	Takifugu_rubripes
ENSNLEG00000010017	-	64	62.369	ENSTNIG00000002567	rbfox1	100	64.111	Tetraodon_nigroviridis
ENSNLEG00000010017	-	81	89.655	ENSTBEG00000009169	-	81	89.655	Tupaia_belangeri
ENSNLEG00000010017	-	100	97.847	ENSTTRG00000005700	RBFOX1	100	97.847	Tursiops_truncatus
ENSNLEG00000010017	-	92	94.271	ENSUAMG00000024633	RBFOX1	97	94.271	Ursus_americanus
ENSNLEG00000010017	-	95	82.240	ENSUMAG00000003579	RBFOX1	97	85.156	Ursus_maritimus
ENSNLEG00000010017	-	81	99.026	ENSVPAG00000001284	RBFOX1	81	99.026	Vicugna_pacos
ENSNLEG00000010017	-	97	98.352	ENSVVUG00000017311	RBFOX1	98	98.108	Vulpes_vulpes