EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000010208 (Gene tree)
Gene ID: 100594338
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 50380 bases
Position: chr13:247201-297580
Accession: 100594338
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000032061	PRP1_N	PF06424.12	2.2e-57	1	1
ENSNLEP00000012463	PRP1_N	PF06424.12	2.3e-57	1	1
ENSNLEP00000042148	PRP1_N	PF06424.12	5.7e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000013070	PRPF6-203	2820	-	ENSNLEP00000012463	939 (aa)	-	G1RGW3
ENSNLET00000040054	PRPF6-202	1767	-	ENSNLEP00000042148	588 (aa)	-	A0A2I3HES0
ENSNLET00000040018	PRPF6-201	3115	XM_003280170	ENSNLEP00000032061	941 (aa)	XP_003280218	A0A2I3GL85

Gene Model

Click here to download ENSNLEG00000010208's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000010208's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000010208	PRPF6	100	99.894	ENSG00000101161	PRPF6	100	99.894	Homo_sapiens
ENSNLEG00000010208	PRPF6	100	92.242	ENSAPOG00000010395	prpf6	96	92.667	Acanthochromis_polyacanthus
ENSNLEG00000010208	PRPF6	100	96.285	ENSAMEG00000001916	PRPF6	99	96.285	Ailuropoda_melanoleuca
ENSNLEG00000010208	PRPF6	100	91.923	ENSACIG00000019862	prpf6	96	92.349	Amphilophus_citrinellus
ENSNLEG00000010208	PRPF6	100	92.136	ENSAOCG00000012988	prpf6	96	92.561	Amphiprion_ocellaris
ENSNLEG00000010208	PRPF6	96	91.652	ENSAPEG00000008301	prpf6	100	85.972	Amphiprion_percula
ENSNLEG00000010208	PRPF6	100	91.605	ENSATEG00000005581	prpf6	96	92.030	Anabas_testudineus
ENSNLEG00000010208	PRPF6	100	96.918	ENSACAG00000006464	PRPF6	95	96.918	Anolis_carolinensis
ENSNLEG00000010208	PRPF6	100	99.044	ENSANAG00000012661	PRPF6	100	99.293	Aotus_nancymaae
ENSNLEG00000010208	PRPF6	100	91.817	ENSACLG00000025875	prpf6	96	92.242	Astatotilapia_calliptera
ENSNLEG00000010208	PRPF6	99	92.234	ENSAMXG00000001929	prpf6	96	92.660	Astyanax_mexicanus
ENSNLEG00000010208	PRPF6	100	97.237	ENSBTAG00000011656	PRPF6	100	97.237	Bos_taurus
ENSNLEG00000010208	PRPF6	100	99.044	ENSCJAG00000010616	PRPF6	100	99.044	Callithrix_jacchus
ENSNLEG00000010208	PRPF6	100	97.768	ENSCAFG00000013165	PRPF6	100	97.768	Canis_familiaris
ENSNLEG00000010208	PRPF6	100	97.768	ENSCAFG00020002050	PRPF6	100	97.768	Canis_lupus_dingo
ENSNLEG00000010208	PRPF6	100	97.237	ENSCHIG00000018187	PRPF6	100	97.237	Capra_hircus
ENSNLEG00000010208	PRPF6	100	98.193	ENSTSYG00000007814	PRPF6	100	98.193	Carlito_syrichta
ENSNLEG00000010208	PRPF6	97	96.728	ENSCAPG00000015077	PRPF6	100	96.728	Cavia_aperea
ENSNLEG00000010208	PRPF6	100	97.981	ENSCPOG00000007518	PRPF6	100	97.981	Cavia_porcellus
ENSNLEG00000010208	PRPF6	100	97.288	ENSCCAG00000024564	PRPF6	100	95.749	Cebus_capucinus
ENSNLEG00000010208	PRPF6	100	99.787	ENSCATG00000037473	PRPF6	100	99.787	Cercocebus_atys
ENSNLEG00000010208	PRPF6	100	93.943	ENSCLAG00000003854	PRPF6	100	93.943	Chinchilla_lanigera
ENSNLEG00000010208	PRPF6	100	94.720	ENSCSAG00000016742	PRPF6	100	94.720	Chlorocebus_sabaeus
ENSNLEG00000010208	PRPF6	85	80.488	ENSCHOG00000003315	-	100	80.488	Choloepus_hoffmanni
ENSNLEG00000010208	PRPF6	100	97.131	ENSCPBG00000013964	PRPF6	96	97.131	Chrysemys_picta_bellii
ENSNLEG00000010208	PRPF6	99	73.044	ENSCING00000008817	-	99	73.044	Ciona_intestinalis
ENSNLEG00000010208	PRPF6	100	99.894	ENSCANG00000038230	PRPF6	100	99.894	Colobus_angolensis_palliatus
ENSNLEG00000010208	PRPF6	100	98.087	ENSCGRG00001022666	Prpf6	100	98.087	Cricetulus_griseus_chok1gshd
ENSNLEG00000010208	PRPF6	100	86.610	ENSCSEG00000018561	prpf6	100	87.035	Cynoglossus_semilaevis
ENSNLEG00000010208	PRPF6	100	92.242	ENSCVAG00000010550	prpf6	96	92.667	Cyprinodon_variegatus
ENSNLEG00000010208	PRPF6	100	91.817	ENSDARG00000091367	prpf6	99	92.242	Danio_rerio
ENSNLEG00000010208	PRPF6	100	96.706	ENSDNOG00000040544	PRPF6	100	96.706	Dasypus_novemcinctus
ENSNLEG00000010208	PRPF6	91	97.217	ENSDORG00000005406	Prpf6	100	96.963	Dipodomys_ordii
ENSNLEG00000010208	PRPF6	99	71.781	FBgn0036828	CG6841	98	72.210	Drosophila_melanogaster
ENSNLEG00000010208	PRPF6	86	94.591	ENSETEG00000004447	PRPF6	85	94.591	Echinops_telfairi
ENSNLEG00000010208	PRPF6	99	86.744	ENSEBUG00000008835	prpf6	99	86.744	Eptatretus_burgeri
ENSNLEG00000010208	PRPF6	100	97.343	ENSEASG00005023115	PRPF6	100	97.343	Equus_asinus_asinus
ENSNLEG00000010208	PRPF6	96	97.699	ENSECAG00000013983	PRPF6	100	93.199	Equus_caballus
ENSNLEG00000010208	PRPF6	90	100.000	ENSEEUG00000000180	PRPF6	81	100.000	Erinaceus_europaeus
ENSNLEG00000010208	PRPF6	100	90.861	ENSELUG00000001945	prpf6	93	90.861	Esox_lucius
ENSNLEG00000010208	PRPF6	100	97.343	ENSFCAG00000001183	PRPF6	100	97.343	Felis_catus
ENSNLEG00000010208	PRPF6	100	97.131	ENSFALG00000010326	-	97	97.131	Ficedula_albicollis
ENSNLEG00000010208	PRPF6	100	89.479	ENSFALG00000006046	-	97	89.479	Ficedula_albicollis
ENSNLEG00000010208	PRPF6	100	96.493	ENSFDAG00000006451	PRPF6	100	97.846	Fukomys_damarensis
ENSNLEG00000010208	PRPF6	100	92.774	ENSFHEG00000000560	prpf6	96	92.774	Fundulus_heteroclitus
ENSNLEG00000010208	PRPF6	100	88.818	ENSGMOG00000015622	prpf6	99	88.818	Gadus_morhua
ENSNLEG00000010208	PRPF6	100	97.343	ENSGALG00000006001	PRPF6	100	97.343	Gallus_gallus
ENSNLEG00000010208	PRPF6	100	87.248	ENSGAFG00000021109	prpf6	96	87.673	Gambusia_affinis
ENSNLEG00000010208	PRPF6	100	90.755	ENSGACG00000002576	prpf6	99	90.755	Gasterosteus_aculeatus
ENSNLEG00000010208	PRPF6	100	97.024	ENSGAGG00000008653	PRPF6	96	97.024	Gopherus_agassizii
ENSNLEG00000010208	PRPF6	100	99.894	ENSGGOG00000016876	PRPF6	100	99.894	Gorilla_gorilla
ENSNLEG00000010208	PRPF6	100	91.817	ENSHBUG00000004496	prpf6	96	92.242	Haplochromis_burtoni
ENSNLEG00000010208	PRPF6	100	97.875	ENSHGLG00000009222	PRPF6	100	97.875	Heterocephalus_glaber_female
ENSNLEG00000010208	PRPF6	97	97.819	ENSHGLG00100016600	PRPF6	100	97.819	Heterocephalus_glaber_male
ENSNLEG00000010208	PRPF6	100	90.648	ENSHCOG00000011513	prpf6	96	91.073	Hippocampus_comes
ENSNLEG00000010208	PRPF6	100	92.667	ENSIPUG00000004912	prpf6	96	92.667	Ictalurus_punctatus
ENSNLEG00000010208	PRPF6	100	95.223	ENSSTOG00000002922	PRPF6	100	95.223	Ictidomys_tridecemlineatus
ENSNLEG00000010208	PRPF6	100	97.981	ENSJJAG00000000836	Prpf6	100	97.981	Jaculus_jaculus
ENSNLEG00000010208	PRPF6	100	91.817	ENSKMAG00000017800	prpf6	96	92.242	Kryptolebias_marmoratus
ENSNLEG00000010208	PRPF6	100	91.286	ENSLBEG00000012582	prpf6	96	91.286	Labrus_bergylta
ENSNLEG00000010208	PRPF6	100	93.836	ENSLOCG00000004827	prpf6	96	92.880	Lepisosteus_oculatus
ENSNLEG00000010208	PRPF6	100	96.918	ENSLAFG00000005272	PRPF6	100	96.918	Loxodonta_africana
ENSNLEG00000010208	PRPF6	100	99.894	ENSMFAG00000037542	PRPF6	100	99.894	Macaca_fascicularis
ENSNLEG00000010208	PRPF6	96	97.699	ENSMMUG00000015558	PRPF6	98	99.653	Macaca_mulatta
ENSNLEG00000010208	PRPF6	100	85.381	ENSMNEG00000045555	PRPF6	100	85.381	Macaca_nemestrina
ENSNLEG00000010208	PRPF6	100	91.923	ENSMAMG00000010718	prpf6	96	92.349	Mastacembelus_armatus
ENSNLEG00000010208	PRPF6	100	91.295	ENSMZEG00005015261	-	99	91.720	Maylandia_zebra
ENSNLEG00000010208	PRPF6	97	92.091	ENSMZEG00005026539	prpf6	100	91.723	Maylandia_zebra
ENSNLEG00000010208	PRPF6	97	97.056	ENSMGAG00000006634	PRPF6	100	97.056	Meleagris_gallopavo
ENSNLEG00000010208	PRPF6	100	98.193	ENSMAUG00000013969	Prpf6	100	98.193	Mesocricetus_auratus
ENSNLEG00000010208	PRPF6	87	97.810	ENSMICG00000017793	PRPF6	99	97.810	Microcebus_murinus
ENSNLEG00000010208	PRPF6	100	98.087	ENSMOCG00000001701	Prpf6	100	98.087	Microtus_ochrogaster
ENSNLEG00000010208	PRPF6	100	90.967	ENSMMOG00000020419	prpf6	100	91.392	Mola_mola
ENSNLEG00000010208	PRPF6	99	98.274	ENSMODG00000017051	PRPF6	99	98.274	Monodelphis_domestica
ENSNLEG00000010208	PRPF6	99	92.052	ENSMALG00000000089	prpf6	100	92.052	Monopterus_albus
ENSNLEG00000010208	PRPF6	100	91.498	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSNLEG00000010208	PRPF6	100	98.193	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSNLEG00000010208	PRPF6	100	98.193	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSNLEG00000010208	PRPF6	100	98.193	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSNLEG00000010208	PRPF6	96	97.168	ENSMPUG00000008673	PRPF6	99	97.168	Mustela_putorius_furo
ENSNLEG00000010208	PRPF6	100	98.087	ENSNGAG00000003365	Prpf6	100	98.087	Nannospalax_galili
ENSNLEG00000010208	PRPF6	100	91.923	ENSNBRG00000015025	prpf6	96	92.349	Neolamprologus_brichardi
ENSNLEG00000010208	PRPF6	100	88.270	ENSMEUG00000009824	-	90	88.270	Notamacropus_eugenii
ENSNLEG00000010208	PRPF6	96	98.053	ENSODEG00000004841	PRPF6	100	92.561	Octodon_degus
ENSNLEG00000010208	PRPF6	100	91.817	ENSONIG00000017406	prpf6	96	92.242	Oreochromis_niloticus
ENSNLEG00000010208	PRPF6	100	97.343	ENSOANG00000004920	PRPF6	100	97.343	Ornithorhynchus_anatinus
ENSNLEG00000010208	PRPF6	99	96.030	ENSOCUG00000014151	PRPF6	100	96.030	Oryctolagus_cuniculus
ENSNLEG00000010208	PRPF6	100	91.817	ENSORLG00000009592	prpf6	96	91.817	Oryzias_latipes
ENSNLEG00000010208	PRPF6	100	91.923	ENSORLG00020001458	prpf6	96	91.923	Oryzias_latipes_hni
ENSNLEG00000010208	PRPF6	100	91.923	ENSORLG00015018762	prpf6	96	91.923	Oryzias_latipes_hsok
ENSNLEG00000010208	PRPF6	100	91.817	ENSOMEG00000012174	prpf6	96	92.242	Oryzias_melastigma
ENSNLEG00000010208	PRPF6	100	90.340	ENSOGAG00000007573	PRPF6	100	90.340	Otolemur_garnettii
ENSNLEG00000010208	PRPF6	100	96.812	ENSOARG00000008776	PRPF6	99	96.812	Ovis_aries
ENSNLEG00000010208	PRPF6	100	99.894	ENSPPAG00000008686	PRPF6	100	99.894	Pan_paniscus
ENSNLEG00000010208	PRPF6	100	97.343	ENSPPRG00000008497	PRPF6	100	97.343	Panthera_pardus
ENSNLEG00000010208	PRPF6	97	97.274	ENSPTIG00000011184	PRPF6	97	97.274	Panthera_tigris_altaica
ENSNLEG00000010208	PRPF6	100	99.894	ENSPTRG00000013765	PRPF6	100	99.894	Pan_troglodytes
ENSNLEG00000010208	PRPF6	100	99.362	ENSPANG00000024135	PRPF6	100	99.362	Papio_anubis
ENSNLEG00000010208	PRPF6	100	93.199	ENSPKIG00000005627	prpf6	99	93.624	Paramormyrops_kingsleyae
ENSNLEG00000010208	PRPF6	96	97.699	ENSPSIG00000007717	PRPF6	100	97.166	Pelodiscus_sinensis
ENSNLEG00000010208	PRPF6	100	89.597	ENSPMGG00000008925	prpf6	96	89.809	Periophthalmus_magnuspinnatus
ENSNLEG00000010208	PRPF6	100	98.087	ENSPEMG00000016036	Prpf6	100	98.087	Peromyscus_maniculatus_bairdii
ENSNLEG00000010208	PRPF6	99	87.673	ENSPMAG00000006144	prpf6	99	87.673	Petromyzon_marinus
ENSNLEG00000010208	PRPF6	100	97.662	ENSPCIG00000017909	PRPF6	100	97.662	Phascolarctos_cinereus
ENSNLEG00000010208	PRPF6	100	92.136	ENSPFOG00000006431	prpf6	96	92.561	Poecilia_formosa
ENSNLEG00000010208	PRPF6	100	92.030	ENSPLAG00000005974	prpf6	96	92.455	Poecilia_latipinna
ENSNLEG00000010208	PRPF6	100	92.242	ENSPMEG00000009977	prpf6	96	92.667	Poecilia_mexicana
ENSNLEG00000010208	PRPF6	100	92.136	ENSPREG00000017993	prpf6	92	92.561	Poecilia_reticulata
ENSNLEG00000010208	PRPF6	100	99.362	ENSPPYG00000011256	PRPF6	100	99.362	Pongo_abelii
ENSNLEG00000010208	PRPF6	95	99.673	ENSPCAG00000006536	PRPF6	88	99.673	Procavia_capensis
ENSNLEG00000010208	PRPF6	100	97.662	ENSPCOG00000016881	PRPF6	100	97.662	Propithecus_coquereli
ENSNLEG00000010208	PRPF6	100	91.286	ENSPVAG00000014316	PRPF6	100	91.286	Pteropus_vampyrus
ENSNLEG00000010208	PRPF6	100	75.372	ENSPNYG00000001939	prpf6	96	80.659	Pundamilia_nyererei
ENSNLEG00000010208	PRPF6	100	92.561	ENSPNAG00000015606	prpf6	96	92.986	Pygocentrus_nattereri
ENSNLEG00000010208	PRPF6	100	98.300	ENSRNOG00000051498	Prpf6	100	98.300	Rattus_norvegicus
ENSNLEG00000010208	PRPF6	100	99.894	ENSRBIG00000043613	PRPF6	100	99.894	Rhinopithecus_bieti
ENSNLEG00000010208	PRPF6	100	97.797	ENSRROG00000040969	PRPF6	100	97.797	Rhinopithecus_roxellana
ENSNLEG00000010208	PRPF6	100	92.881	ENSSBOG00000020632	PRPF6	95	92.881	Saimiri_boliviensis_boliviensis
ENSNLEG00000010208	PRPF6	100	97.662	ENSSHAG00000016810	PRPF6	100	97.662	Sarcophilus_harrisii
ENSNLEG00000010208	PRPF6	99	93.448	ENSSFOG00015020859	prpf6	100	93.878	Scleropages_formosus
ENSNLEG00000010208	PRPF6	100	91.180	ENSSMAG00000008112	prpf6	96	91.180	Scophthalmus_maximus
ENSNLEG00000010208	PRPF6	100	91.817	ENSSDUG00000016142	prpf6	96	92.242	Seriola_dumerili
ENSNLEG00000010208	PRPF6	100	91.817	ENSSLDG00000025283	prpf6	100	88.735	Seriola_lalandi_dorsalis
ENSNLEG00000010208	PRPF6	97	96.667	ENSSPUG00000018260	PRPF6	100	96.145	Sphenodon_punctatus
ENSNLEG00000010208	PRPF6	100	91.817	ENSSPAG00000015850	prpf6	96	92.242	Stegastes_partitus
ENSNLEG00000010208	PRPF6	100	97.024	ENSSSCG00000029119	PRPF6	100	96.825	Sus_scrofa
ENSNLEG00000010208	PRPF6	100	97.237	ENSTGUG00000007221	PRPF6	99	97.237	Taeniopygia_guttata
ENSNLEG00000010208	PRPF6	100	90.755	ENSTRUG00000002920	prpf6	96	91.180	Takifugu_rubripes
ENSNLEG00000010208	PRPF6	100	84.461	ENSTNIG00000017873	prpf6	100	84.884	Tetraodon_nigroviridis
ENSNLEG00000010208	PRPF6	89	98.895	ENSTBEG00000005348	PRPF6	85	98.895	Tupaia_belangeri
ENSNLEG00000010208	PRPF6	100	96.493	ENSTTRG00000013068	PRPF6	100	96.493	Tursiops_truncatus
ENSNLEG00000010208	PRPF6	100	97.699	ENSUMAG00000021631	PRPF6	97	97.699	Ursus_maritimus
ENSNLEG00000010208	PRPF6	100	97.768	ENSVVUG00000014948	PRPF6	100	97.768	Vulpes_vulpes
ENSNLEG00000010208	PRPF6	100	94.899	ENSXETG00000012054	prpf6	97	95.324	Xenopus_tropicalis
ENSNLEG00000010208	PRPF6	100	92.242	ENSXCOG00000008082	prpf6	96	92.667	Xiphophorus_couchianus
ENSNLEG00000010208	PRPF6	100	92.242	ENSXMAG00000015581	prpf6	96	92.667	Xiphophorus_maculatus