EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000010241 (Gene tree)
Gene ID: 100598246
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 199001 bases
Position: chr18:90358760-90557760
Accession: 100598246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000040451	R3H	PF01424.22	5.4e-05	1	1
ENSNLEP00000012504	R3H	PF01424.22	5.9e-05	1	1
ENSNLEP00000031688	RNA_bind	PF08675.11	9.8e-34	1	1
ENSNLEP00000040451	RNA_bind	PF08675.11	1.4e-33	1	1
ENSNLEP00000047996	RNA_bind	PF08675.11	1.4e-33	1	1
ENSNLEP00000012504	RNA_bind	PF08675.11	1.5e-33	1	1
ENSNLEP00000012504	CAF1	PF04857.20	3e-89	1	1
ENSNLEP00000047996	CAF1	PF04857.20	1.5e-79	1	1
ENSNLEP00000040451	CAF1	PF04857.20	4e-68	1	2
ENSNLEP00000040451	CAF1	PF04857.20	4e-68	2	2
ENSNLEP00000031688	CAF1	PF04857.20	2e-52	1	2
ENSNLEP00000031688	CAF1	PF04857.20	2e-52	2	2
ENSNLEP00000037539	CAF1	PF04857.20	8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000059362	PARN-205	198	-	ENSNLEP00000037539	65 (aa)	-	A0A2I3H1S2
ENSNLET00000050198	PARN-204	1890	-	ENSNLEP00000047996	629 (aa)	-	A0A2I3HWY2
ENSNLET00000054042	PARN-202	2900	XM_003269305	ENSNLEP00000040451	593 (aa)	XP_003269353	A0A2I3HAE8
ENSNLET00000013115	PARN-201	3059	XM_003269303	ENSNLEP00000012504	639 (aa)	XP_003269351	G1RH04
ENSNLET00000050247	PARN-203	2492	XM_012497410	ENSNLEP00000031688	464 (aa)	XP_012352864	A0A2I3GK42

Gene Model

Click here to download ENSNLEG00000010241's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000010241's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000010241	PARN	100	100.000	ENSG00000140694	PARN	100	100.000	Homo_sapiens
ENSNLEG00000010241	PARN	92	80.000	ENSAPOG00000019730	-	100	69.231	Acanthochromis_polyacanthus
ENSNLEG00000010241	PARN	100	96.610	ENSAMEG00000011208	PARN	100	92.656	Ailuropoda_melanoleuca
ENSNLEG00000010241	PARN	92	78.333	ENSACIG00000000619	parn	83	76.679	Amphilophus_citrinellus
ENSNLEG00000010241	PARN	91	77.966	ENSAOCG00000003465	parn	83	73.469	Amphiprion_ocellaris
ENSNLEG00000010241	PARN	74	77.987	ENSAPEG00000010661	parn	91	77.987	Amphiprion_percula
ENSNLEG00000010241	PARN	91	76.271	ENSATEG00000004661	parn	84	74.324	Anabas_testudineus
ENSNLEG00000010241	PARN	99	87.037	ENSAPLG00000013914	PARN	99	84.543	Anas_platyrhynchos
ENSNLEG00000010241	PARN	100	89.831	ENSACAG00000004973	PARN	100	78.769	Anolis_carolinensis
ENSNLEG00000010241	PARN	100	100.000	ENSANAG00000031516	PARN	100	100.000	Aotus_nancymaae
ENSNLEG00000010241	PARN	91	77.966	ENSACLG00000004742	parn	84	74.701	Astatotilapia_calliptera
ENSNLEG00000010241	PARN	91	79.661	ENSAMXG00000012390	parn	92	72.696	Astyanax_mexicanus
ENSNLEG00000010241	PARN	100	98.305	ENSBTAG00000018097	PARN	100	93.772	Bos_taurus
ENSNLEG00000010241	PARN	100	100.000	ENSCJAG00000015866	PARN	100	100.000	Callithrix_jacchus
ENSNLEG00000010241	PARN	100	94.915	ENSCAFG00000018795	PARN	100	92.801	Canis_familiaris
ENSNLEG00000010241	PARN	100	96.610	ENSCAFG00020024126	PARN	100	92.801	Canis_lupus_dingo
ENSNLEG00000010241	PARN	100	98.305	ENSCHIG00000018143	PARN	100	94.053	Capra_hircus
ENSNLEG00000010241	PARN	60	77.500	ENSCAPG00000007984	PARN	78	63.617	Cavia_aperea
ENSNLEG00000010241	PARN	100	98.305	ENSCPOG00000002263	PARN	100	90.610	Cavia_porcellus
ENSNLEG00000010241	PARN	100	100.000	ENSCCAG00000030367	PARN	100	100.000	Cebus_capucinus
ENSNLEG00000010241	PARN	52	35.862	ENSCATG00000033196	PNLDC1	70	35.862	Cercocebus_atys
ENSNLEG00000010241	PARN	91	100.000	ENSCATG00000041368	PARN	100	100.000	Cercocebus_atys
ENSNLEG00000010241	PARN	100	96.610	ENSCLAG00000015406	PARN	99	90.610	Chinchilla_lanigera
ENSNLEG00000010241	PARN	100	100.000	ENSCSAG00000008142	PARN	100	98.905	Chlorocebus_sabaeus
ENSNLEG00000010241	PARN	98	98.077	ENSCHOG00000007014	PARN	100	76.266	Choloepus_hoffmanni
ENSNLEG00000010241	PARN	89	84.906	ENSCPBG00000006609	PARN	97	85.661	Chrysemys_picta_bellii
ENSNLEG00000010241	PARN	88	47.368	ENSCING00000010142	-	99	44.278	Ciona_intestinalis
ENSNLEG00000010241	PARN	100	100.000	ENSCANG00000028849	-	100	100.000	Colobus_angolensis_palliatus
ENSNLEG00000010241	PARN	91	100.000	ENSCANG00000023734	-	100	86.364	Colobus_angolensis_palliatus
ENSNLEG00000010241	PARN	100	96.610	ENSCGRG00001012096	Parn	100	85.514	Cricetulus_griseus_chok1gshd
ENSNLEG00000010241	PARN	57	35.000	ENSCGRG00001011981	-	75	35.000	Cricetulus_griseus_chok1gshd
ENSNLEG00000010241	PARN	100	96.610	ENSCGRG00000004939	Parn	100	85.514	Cricetulus_griseus_crigri
ENSNLEG00000010241	PARN	91	79.661	ENSCSEG00000002064	parn	100	64.706	Cynoglossus_semilaevis
ENSNLEG00000010241	PARN	91	77.966	ENSCVAG00000014848	parn	84	73.051	Cyprinodon_variegatus
ENSNLEG00000010241	PARN	100	71.186	ENSDARG00000102634	parn	100	64.590	Danio_rerio
ENSNLEG00000010241	PARN	100	98.305	ENSDNOG00000000833	PARN	100	92.645	Dasypus_novemcinctus
ENSNLEG00000010241	PARN	91	96.610	ENSDORG00000027812	-	100	87.273	Dipodomys_ordii
ENSNLEG00000010241	PARN	92	95.000	ENSETEG00000014828	-	78	94.297	Echinops_telfairi
ENSNLEG00000010241	PARN	56	30.086	ENSEBUG00000008118	PNLDC1	61	30.086	Eptatretus_burgeri
ENSNLEG00000010241	PARN	100	98.305	ENSEASG00005011400	PARN	100	92.801	Equus_asinus_asinus
ENSNLEG00000010241	PARN	100	96.610	ENSECAG00000017792	PARN	100	92.645	Equus_caballus
ENSNLEG00000010241	PARN	92	96.667	ENSEEUG00000010370	PARN	86	84.163	Erinaceus_europaeus
ENSNLEG00000010241	PARN	91	79.661	ENSELUG00000013139	parn	77	72.222	Esox_lucius
ENSNLEG00000010241	PARN	100	96.610	ENSFCAG00000044961	PARN	100	96.610	Felis_catus
ENSNLEG00000010241	PARN	98	88.462	ENSFALG00000003911	PARN	98	83.386	Ficedula_albicollis
ENSNLEG00000010241	PARN	100	98.305	ENSFDAG00000009234	PARN	100	90.454	Fukomys_damarensis
ENSNLEG00000010241	PARN	98	71.875	ENSFHEG00000013738	parn	100	71.875	Fundulus_heteroclitus
ENSNLEG00000010241	PARN	91	77.966	ENSGMOG00000003231	parn	97	77.425	Gadus_morhua
ENSNLEG00000010241	PARN	100	91.525	ENSGALG00000003091	PARN	100	82.582	Gallus_gallus
ENSNLEG00000010241	PARN	91	79.661	ENSGAFG00000011061	parn	84	73.322	Gambusia_affinis
ENSNLEG00000010241	PARN	91	74.576	ENSGACG00000019501	parn	100	69.136	Gasterosteus_aculeatus
ENSNLEG00000010241	PARN	70	79.448	ENSGAGG00000023281	PARN	83	81.875	Gopherus_agassizii
ENSNLEG00000010241	PARN	100	100.000	ENSGGOG00000025224	PARN	100	100.000	Gorilla_gorilla
ENSNLEG00000010241	PARN	91	77.966	ENSHBUG00000017906	parn	90	77.467	Haplochromis_burtoni
ENSNLEG00000010241	PARN	100	98.305	ENSHGLG00000010886	PARN	100	90.767	Heterocephalus_glaber_female
ENSNLEG00000010241	PARN	100	98.305	ENSHGLG00100014659	PARN	100	90.767	Heterocephalus_glaber_male
ENSNLEG00000010241	PARN	80	84.615	ENSHCOG00000008683	parn	91	74.102	Hippocampus_comes
ENSNLEG00000010241	PARN	91	69.492	ENSIPUG00000012401	parn	87	62.351	Ictalurus_punctatus
ENSNLEG00000010241	PARN	100	96.610	ENSSTOG00000007519	PARN	100	91.549	Ictidomys_tridecemlineatus
ENSNLEG00000010241	PARN	100	98.305	ENSJJAG00000023049	Parn	100	88.263	Jaculus_jaculus
ENSNLEG00000010241	PARN	91	76.271	ENSKMAG00000009462	parn	84	73.559	Kryptolebias_marmoratus
ENSNLEG00000010241	PARN	91	77.966	ENSLBEG00000009167	parn	90	72.804	Labrus_bergylta
ENSNLEG00000010241	PARN	79	78.770	ENSLACG00000004207	PARN	100	77.594	Latimeria_chalumnae
ENSNLEG00000010241	PARN	91	81.356	ENSLOCG00000000715	parn	87	73.684	Lepisosteus_oculatus
ENSNLEG00000010241	PARN	100	98.305	ENSLAFG00000015036	PARN	100	92.801	Loxodonta_africana
ENSNLEG00000010241	PARN	100	100.000	ENSMFAG00000044852	PARN	100	100.000	Macaca_fascicularis
ENSNLEG00000010241	PARN	100	100.000	ENSMMUG00000018849	PARN	100	100.000	Macaca_mulatta
ENSNLEG00000010241	PARN	100	100.000	ENSMNEG00000045108	PARN	100	100.000	Macaca_nemestrina
ENSNLEG00000010241	PARN	100	100.000	ENSMLEG00000031743	PARN	100	100.000	Mandrillus_leucophaeus
ENSNLEG00000010241	PARN	91	77.966	ENSMAMG00000006939	parn	84	72.819	Mastacembelus_armatus
ENSNLEG00000010241	PARN	91	77.966	ENSMZEG00005013590	parn	90	77.239	Maylandia_zebra
ENSNLEG00000010241	PARN	94	100.000	ENSMGAG00000001004	PARN	95	82.708	Meleagris_gallopavo
ENSNLEG00000010241	PARN	95	94.286	ENSMAUG00000008025	Parn	100	80.247	Mesocricetus_auratus
ENSNLEG00000010241	PARN	100	98.462	ENSMICG00000016053	PARN	100	98.462	Microcebus_murinus
ENSNLEG00000010241	PARN	91	94.915	ENSMOCG00000022211	Parn	100	91.093	Microtus_ochrogaster
ENSNLEG00000010241	PARN	91	79.661	ENSMMOG00000011333	parn	87	76.449	Mola_mola
ENSNLEG00000010241	PARN	92	90.000	ENSMODG00000004915	PARN	99	94.556	Monodelphis_domestica
ENSNLEG00000010241	PARN	91	76.667	ENSMALG00000019426	parn	91	79.143	Monopterus_albus
ENSNLEG00000010241	PARN	100	94.915	MGP_CAROLIEiJ_G0020466	Parn	100	86.228	Mus_caroli
ENSNLEG00000010241	PARN	100	93.220	ENSMUSG00000022685	Parn	100	92.683	Mus_musculus
ENSNLEG00000010241	PARN	100	96.610	MGP_PahariEiJ_G0016172	Parn	100	86.072	Mus_pahari
ENSNLEG00000010241	PARN	100	94.915	MGP_SPRETEiJ_G0021361	Parn	100	86.385	Mus_spretus
ENSNLEG00000010241	PARN	100	98.305	ENSMPUG00000014464	PARN	100	92.801	Mustela_putorius_furo
ENSNLEG00000010241	PARN	91	94.915	ENSMLUG00000005414	PARN	100	94.534	Myotis_lucifugus
ENSNLEG00000010241	PARN	91	98.305	ENSNGAG00000024082	-	100	88.182	Nannospalax_galili
ENSNLEG00000010241	PARN	91	77.966	ENSNBRG00000006805	parn	90	76.966	Neolamprologus_brichardi
ENSNLEG00000010241	PARN	93	92.308	ENSMEUG00000008178	-	100	61.076	Notamacropus_eugenii
ENSNLEG00000010241	PARN	98	98.077	ENSOPRG00000012187	PARN	100	85.759	Ochotona_princeps
ENSNLEG00000010241	PARN	100	98.305	ENSODEG00000001617	PARN	100	81.776	Octodon_degus
ENSNLEG00000010241	PARN	100	77.966	ENSONIG00000000151	parn	100	70.000	Oreochromis_niloticus
ENSNLEG00000010241	PARN	82	81.890	ENSOANG00000020155	-	97	82.415	Ornithorhynchus_anatinus
ENSNLEG00000010241	PARN	99	91.071	ENSOCUG00000000322	PARN	100	91.038	Oryctolagus_cuniculus
ENSNLEG00000010241	PARN	100	76.923	ENSORLG00000024893	-	100	67.873	Oryzias_latipes
ENSNLEG00000010241	PARN	93	79.661	ENSORLG00020010313	parn	88	71.475	Oryzias_latipes_hni
ENSNLEG00000010241	PARN	93	79.661	ENSORLG00015000300	parn	88	71.475	Oryzias_latipes_hsok
ENSNLEG00000010241	PARN	91	79.661	ENSOMEG00000019555	parn	97	67.421	Oryzias_melastigma
ENSNLEG00000010241	PARN	92	98.333	ENSOGAG00000014626	PARN	100	94.545	Otolemur_garnettii
ENSNLEG00000010241	PARN	91	98.305	ENSOARG00000007574	PARN	100	97.976	Ovis_aries
ENSNLEG00000010241	PARN	100	100.000	ENSPPAG00000031438	PARN	100	100.000	Pan_paniscus
ENSNLEG00000010241	PARN	100	96.610	ENSPPRG00000018583	PARN	100	96.610	Panthera_pardus
ENSNLEG00000010241	PARN	100	96.610	ENSPTIG00000012135	PARN	100	96.610	Panthera_tigris_altaica
ENSNLEG00000010241	PARN	100	100.000	ENSPTRG00000007792	PARN	100	100.000	Pan_troglodytes
ENSNLEG00000010241	PARN	100	100.000	ENSPANG00000020099	PARN	100	100.000	Papio_anubis
ENSNLEG00000010241	PARN	96	79.661	ENSPKIG00000022807	parn	95	67.857	Paramormyrops_kingsleyae
ENSNLEG00000010241	PARN	98	89.831	ENSPSIG00000014804	PARN	100	83.218	Pelodiscus_sinensis
ENSNLEG00000010241	PARN	91	76.271	ENSPMGG00000014431	parn	75	75.046	Periophthalmus_magnuspinnatus
ENSNLEG00000010241	PARN	100	94.915	ENSPEMG00000018439	Parn	100	83.725	Peromyscus_maniculatus_bairdii
ENSNLEG00000010241	PARN	91	57.627	ENSPMAG00000003956	parn	99	67.500	Petromyzon_marinus
ENSNLEG00000010241	PARN	100	92.308	ENSPCIG00000001259	PARN	100	92.308	Phascolarctos_cinereus
ENSNLEG00000010241	PARN	91	79.661	ENSPFOG00000012823	parn	84	72.896	Poecilia_formosa
ENSNLEG00000010241	PARN	91	79.661	ENSPLAG00000006395	parn	84	73.064	Poecilia_latipinna
ENSNLEG00000010241	PARN	91	79.661	ENSPMEG00000007711	parn	84	73.232	Poecilia_mexicana
ENSNLEG00000010241	PARN	91	79.661	ENSPREG00000000147	parn	84	72.896	Poecilia_reticulata
ENSNLEG00000010241	PARN	100	98.305	ENSPPYG00000007123	PARN	100	98.284	Pongo_abelii
ENSNLEG00000010241	PARN	93	96.154	ENSPCAG00000001741	PARN	100	83.003	Procavia_capensis
ENSNLEG00000010241	PARN	100	98.462	ENSPCOG00000019292	PARN	100	98.462	Propithecus_coquereli
ENSNLEG00000010241	PARN	98	98.077	ENSPVAG00000002547	PARN	100	89.082	Pteropus_vampyrus
ENSNLEG00000010241	PARN	91	77.966	ENSPNYG00000006835	parn	90	74.488	Pundamilia_nyererei
ENSNLEG00000010241	PARN	84	73.743	ENSPNAG00000018905	parn	86	73.743	Pygocentrus_nattereri
ENSNLEG00000010241	PARN	100	93.220	ENSRNOG00000002912	Parn	98	88.889	Rattus_norvegicus
ENSNLEG00000010241	PARN	72	98.198	ENSRBIG00000018726	PARN	100	98.198	Rhinopithecus_bieti
ENSNLEG00000010241	PARN	72	98.198	ENSRROG00000011162	-	100	98.198	Rhinopithecus_roxellana
ENSNLEG00000010241	PARN	92	98.333	ENSRROG00000020116	-	86	98.361	Rhinopithecus_roxellana
ENSNLEG00000010241	PARN	100	100.000	ENSSBOG00000034726	PARN	100	100.000	Saimiri_boliviensis_boliviensis
ENSNLEG00000010241	PARN	83	88.889	ENSSHAG00000008493	PARN	94	93.541	Sarcophilus_harrisii
ENSNLEG00000010241	PARN	94	79.661	ENSSFOG00015014165	parn	94	73.379	Scleropages_formosus
ENSNLEG00000010241	PARN	91	76.271	ENSSMAG00000000685	parn	87	71.956	Scophthalmus_maximus
ENSNLEG00000010241	PARN	91	76.271	ENSSDUG00000014555	parn	84	73.064	Seriola_dumerili
ENSNLEG00000010241	PARN	91	76.271	ENSSLDG00000007603	-	100	64.253	Seriola_lalandi_dorsalis
ENSNLEG00000010241	PARN	91	80.172	ENSSARG00000014339	PARN	100	80.172	Sorex_araneus
ENSNLEG00000010241	PARN	100	89.831	ENSSPUG00000007719	PARN	100	84.820	Sphenodon_punctatus
ENSNLEG00000010241	PARN	91	77.966	ENSSPAG00000007095	parn	86	75.094	Stegastes_partitus
ENSNLEG00000010241	PARN	100	98.305	ENSSSCG00000007878	PARN	89	93.114	Sus_scrofa
ENSNLEG00000010241	PARN	55	30.556	ENSTGUG00000011418	PNLDC1	68	30.556	Taeniopygia_guttata
ENSNLEG00000010241	PARN	99	87.037	ENSTGUG00000004971	PARN	99	83.123	Taeniopygia_guttata
ENSNLEG00000010241	PARN	100	71.212	ENSTRUG00000015208	-	94	71.212	Takifugu_rubripes
ENSNLEG00000010241	PARN	100	79.661	ENSTNIG00000008252	parn	100	69.552	Tetraodon_nigroviridis
ENSNLEG00000010241	PARN	91	79.310	ENSTBEG00000010407	PARN	100	79.310	Tupaia_belangeri
ENSNLEG00000010241	PARN	98	98.077	ENSTTRG00000002843	PARN	100	88.766	Tursiops_truncatus
ENSNLEG00000010241	PARN	67	85.714	ENSUAMG00000008283	PARN	94	82.353	Ursus_americanus
ENSNLEG00000010241	PARN	100	98.305	ENSUMAG00000004527	PARN	100	93.114	Ursus_maritimus
ENSNLEG00000010241	PARN	95	98.077	ENSVPAG00000008968	PARN	100	89.902	Vicugna_pacos
ENSNLEG00000010241	PARN	100	96.610	ENSVVUG00000019509	PARN	100	93.271	Vulpes_vulpes
ENSNLEG00000010241	PARN	100	81.967	ENSXETG00000010994	parn	100	82.890	Xenopus_tropicalis
ENSNLEG00000010241	PARN	91	79.661	ENSXCOG00000015990	parn	96	69.543	Xiphophorus_couchianus
ENSNLEG00000010241	PARN	91	79.661	ENSXMAG00000014783	parn	84	73.569	Xiphophorus_maculatus