EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000010268 (Gene tree)
Gene ID: 100581084
Gene Symbol: RBM12
Alias: HRIHFB2091|KIAA0765|SWAN
Full Name: copine 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 40022 bases
Position: chr13:29245000-29285021
Accession: 100581084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000046732	RRM_1	PF00076.22	1.9e-30	1	3
ENSNLEP00000046732	RRM_1	PF00076.22	1.9e-30	2	3
ENSNLEP00000046732	RRM_1	PF00076.22	1.9e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000013175	RBM12-201	1797	-	ENSNLEP00000012562	598 (aa)	-	G1RH62
ENSNLET00000033859	RBM12-203	2865	-	ENSNLEP00000046732	954 (aa)	-	A0A2I3HT60
ENSNLET00000056438	RBM12-202	2005	XM_003273575	ENSNLEP00000041641	569 (aa)	XP_003273623	A0A2I3HDV4
ENSNLET00000045608	RBM12-204	2190	XM_003273578	ENSNLEP00000032697	542 (aa)	XP_003273626	A0A2I3GN60

Gene Model

Click here to download ENSNLEG00000010268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000010268's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000010268	RBM12	54	72.414	ENSNLEG00000032050	RBM12B	57	72.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000010268	RBM12	98	99.678	ENSG00000244462	RBM12	100	100.000	Homo_sapiens
ENSNLEG00000010268	RBM12	98	95.708	ENSAMEG00000019189	RBM12	100	94.313	Ailuropoda_melanoleuca
ENSNLEG00000010268	RBM12	99	78.398	ENSACAG00000006330	RBM12	99	78.398	Anolis_carolinensis
ENSNLEG00000010268	RBM12	100	98.113	ENSANAG00000032596	RBM12	100	98.113	Aotus_nancymaae
ENSNLEG00000010268	RBM12	98	92.163	ENSBTAG00000044015	RBM12	100	91.745	Bos_taurus
ENSNLEG00000010268	RBM12	100	94.969	ENSCAFG00000008256	RBM12	100	94.235	Canis_familiaris
ENSNLEG00000010268	RBM12	98	94.206	ENSCAFG00020005650	RBM12	100	94.099	Canis_lupus_dingo
ENSNLEG00000010268	RBM12	98	94.421	ENSCHIG00000024592	RBM12	100	93.670	Capra_hircus
ENSNLEG00000010268	RBM12	100	94.444	ENSTSYG00000030563	RBM12	100	94.444	Carlito_syrichta
ENSNLEG00000010268	RBM12	82	84.379	ENSCAPG00000006176	RBM12	80	93.866	Cavia_aperea
ENSNLEG00000010268	RBM12	98	85.571	ENSCPOG00000035170	RBM12	100	93.909	Cavia_porcellus
ENSNLEG00000010268	RBM12	91	89.418	ENSCCAG00000035899	-	100	76.180	Cebus_capucinus
ENSNLEG00000010268	RBM12	94	94.395	ENSCCAG00000036056	-	98	94.395	Cebus_capucinus
ENSNLEG00000010268	RBM12	100	99.161	ENSCATG00000030934	RBM12	100	99.161	Cercocebus_atys
ENSNLEG00000010268	RBM12	98	93.133	ENSCLAG00000017230	RBM12	100	93.133	Chinchilla_lanigera
ENSNLEG00000010268	RBM12	100	99.057	ENSCANG00000030552	RBM12	100	99.057	Colobus_angolensis_palliatus
ENSNLEG00000010268	RBM12	98	80.900	ENSCGRG00001021144	Rbm12	100	86.030	Cricetulus_griseus_chok1gshd
ENSNLEG00000010268	RBM12	98	80.900	ENSCGRG00000012719	Rbm12	100	86.030	Cricetulus_griseus_crigri
ENSNLEG00000010268	RBM12	73	86.448	ENSDORG00000000606	-	100	81.974	Dipodomys_ordii
ENSNLEG00000010268	RBM12	98	92.789	ENSDORG00000028509	-	100	93.162	Dipodomys_ordii
ENSNLEG00000010268	RBM12	54	65.649	ENSEBUG00000016806	rbm12	89	65.649	Eptatretus_burgeri
ENSNLEG00000010268	RBM12	98	94.742	ENSECAG00000021997	RBM12	100	93.884	Equus_caballus
ENSNLEG00000010268	RBM12	98	94.099	ENSFDAG00000014663	RBM12	100	93.670	Fukomys_damarensis
ENSNLEG00000010268	RBM12	98	79.207	ENSGALG00000030253	RBM12	100	79.636	Gallus_gallus
ENSNLEG00000010268	RBM12	100	99.476	ENSGGOG00000028500	RBM12	100	99.476	Gorilla_gorilla
ENSNLEG00000010268	RBM12	98	93.991	ENSHGLG00000013208	RBM12	100	93.562	Heterocephalus_glaber_female
ENSNLEG00000010268	RBM12	88	97.179	ENSHGLG00100019158	RBM12	90	97.179	Heterocephalus_glaber_male
ENSNLEG00000010268	RBM12	98	90.441	ENSSTOG00000019739	RBM12	100	90.231	Ictidomys_tridecemlineatus
ENSNLEG00000010268	RBM12	98	93.670	ENSLAFG00000010341	RBM12	100	93.240	Loxodonta_africana
ENSNLEG00000010268	RBM12	100	99.161	ENSMFAG00000032583	RBM12	100	99.161	Macaca_fascicularis
ENSNLEG00000010268	RBM12	98	99.249	ENSMMUG00000020960	CPNE1	100	99.249	Macaca_mulatta
ENSNLEG00000010268	RBM12	100	99.266	ENSMNEG00000045365	RBM12	100	99.266	Macaca_nemestrina
ENSNLEG00000010268	RBM12	100	99.266	ENSMLEG00000032492	RBM12	100	99.266	Mandrillus_leucophaeus
ENSNLEG00000010268	RBM12	99	78.105	ENSMGAG00000001502	RBM12	100	79.479	Meleagris_gallopavo
ENSNLEG00000010268	RBM12	98	86.533	ENSMAUG00000012800	Rbm12	100	87.236	Mesocricetus_auratus
ENSNLEG00000010268	RBM12	100	93.396	ENSMICG00000032761	-	100	93.816	Microcebus_murinus
ENSNLEG00000010268	RBM12	98	85.086	ENSMICG00000029540	-	72	84.604	Microcebus_murinus
ENSNLEG00000010268	RBM12	98	80.120	ENSMOCG00000012950	Rbm12	100	92.493	Microtus_ochrogaster
ENSNLEG00000010268	RBM12	100	85.010	ENSMODG00000001591	RBM12	100	84.801	Monodelphis_domestica
ENSNLEG00000010268	RBM12	98	77.299	MGP_CAROLIEiJ_G0024551	Rbm12	100	92.776	Mus_caroli
ENSNLEG00000010268	RBM12	98	85.456	ENSMUSG00000089824	Rbm12	100	93.010	Mus_musculus
ENSNLEG00000010268	RBM12	98	78.373	MGP_PahariEiJ_G0025996	Rbm12	100	93.295	Mus_pahari
ENSNLEG00000010268	RBM12	71	94.559	MGP_SPRETEiJ_G0025473	Rbm12	100	84.623	Mus_spretus
ENSNLEG00000010268	RBM12	98	94.313	ENSMPUG00000017789	-	100	93.562	Mustela_putorius_furo
ENSNLEG00000010268	RBM12	100	94.025	ENSMLUG00000011217	RBM12	100	93.291	Myotis_lucifugus
ENSNLEG00000010268	RBM12	98	80.704	ENSNGAG00000015846	Rbm12	100	86.660	Nannospalax_galili
ENSNLEG00000010268	RBM12	98	84.871	ENSMEUG00000007621	RBM12	100	84.657	Notamacropus_eugenii
ENSNLEG00000010268	RBM12	98	92.144	ENSOPRG00000005687	RBM12	100	91.720	Ochotona_princeps
ENSNLEG00000010268	RBM12	84	89.157	ENSODEG00000013870	RBM12	100	86.735	Octodon_degus
ENSNLEG00000010268	RBM12	100	99.686	ENSPPAG00000040719	RBM12	100	99.686	Pan_paniscus
ENSNLEG00000010268	RBM12	100	99.686	ENSPTRG00000013446	RBM12	100	99.686	Pan_troglodytes
ENSNLEG00000010268	RBM12	100	99.686	ENSPTRG00000040708	-	100	99.686	Pan_troglodytes
ENSNLEG00000010268	RBM12	100	99.266	ENSPANG00000020003	CPNE1	100	99.266	Papio_anubis
ENSNLEG00000010268	RBM12	88	85.672	ENSPSIG00000007369	RBM12	92	93.103	Pelodiscus_sinensis
ENSNLEG00000010268	RBM12	98	79.860	ENSPEMG00000017769	Rbm12	100	81.647	Peromyscus_maniculatus_bairdii
ENSNLEG00000010268	RBM12	58	82.609	ENSPFOG00000023551	rbm12	93	78.873	Poecilia_formosa
ENSNLEG00000010268	RBM12	98	99.358	ENSPPYG00000010960	RBM12	100	99.358	Pongo_abelii
ENSNLEG00000010268	RBM12	98	92.275	ENSPCAG00000008653	RBM12	100	91.524	Procavia_capensis
ENSNLEG00000010268	RBM12	100	96.122	ENSPCOG00000023724	RBM12	100	96.122	Propithecus_coquereli
ENSNLEG00000010268	RBM12	81	94.026	ENSPVAG00000014937	RBM12	100	93.562	Pteropus_vampyrus
ENSNLEG00000010268	RBM12	73	92.725	ENSRNOG00000019723	Rbm12	97	92.725	Rattus_norvegicus
ENSNLEG00000010268	RBM12	73	92.725	ENSRNOG00000049913	LOC100910990	97	92.725	Rattus_norvegicus
ENSNLEG00000010268	RBM12	100	99.266	ENSRBIG00000042965	RBM12	100	99.266	Rhinopithecus_bieti
ENSNLEG00000010268	RBM12	100	99.266	ENSRROG00000037485	RBM12	100	99.266	Rhinopithecus_roxellana
ENSNLEG00000010268	RBM12	100	98.008	ENSSBOG00000027633	RBM12	100	98.008	Saimiri_boliviensis_boliviensis
ENSNLEG00000010268	RBM12	98	85.408	ENSSHAG00000018585	RBM12	100	85.193	Sarcophilus_harrisii
ENSNLEG00000010268	RBM12	98	94.877	ENSSSCG00000036156	RBM12	100	94.130	Sus_scrofa
ENSNLEG00000010268	RBM12	98	79.614	ENSTGUG00000003002	RBM12	100	79.077	Taeniopygia_guttata
ENSNLEG00000010268	RBM12	98	94.206	ENSTTRG00000017035	RBM12	100	93.455	Tursiops_truncatus
ENSNLEG00000010268	RBM12	98	93.348	ENSUAMG00000010430	RBM12	100	93.991	Ursus_americanus
ENSNLEG00000010268	RBM12	86	100.000	ENSVPAG00000003812	RBM12	87	100.000	Vicugna_pacos
ENSNLEG00000010268	RBM12	98	60.443	ENSXETG00000033541	RBM12	78	60.795	Xenopus_tropicalis