EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000010285 (Gene tree)
Gene ID: 100602484
Gene Symbol: HFM1
Alias: FLJ36760|FLJ39011|MER3|SEC63D1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 119339 bases
Position: chr12:85428081-85547419
Accession: 100602484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000012560	ResIII	PF04851.15	1.5e-11	1	1
ENSNLEP00000012560	DEAD	PF00270.29	3.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000013173	HFM1-201	4293	XM_012500382	ENSNLEP00000012560	1430 (aa)	XP_012355836	G1RH60

Gene Model

Click here to download ENSNLEG00000010285's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000010285's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000010285	HFM1	61	30.529	ENSNLEG00000000025	SNRNP200	72	30.529
ENSNLEG00000010285	HFM1	51	35.127	ENSNLEG00000013890	ASCC3	62	35.127

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000010285	HFM1	100	93.946	ENSG00000162669	HFM1	100	97.674	Homo_sapiens
ENSNLEG00000010285	HFM1	63	63.636	ENSAPOG00000005304	hfm1	100	63.636	Acanthochromis_polyacanthus
ENSNLEG00000010285	HFM1	100	82.341	ENSAMEG00000000432	HFM1	100	82.341	Ailuropoda_melanoleuca
ENSNLEG00000010285	HFM1	70	57.546	ENSACIG00000021553	hfm1	91	57.546	Amphilophus_citrinellus
ENSNLEG00000010285	HFM1	63	64.486	ENSAOCG00000022839	hfm1	100	64.486	Amphiprion_ocellaris
ENSNLEG00000010285	HFM1	63	64.136	ENSAPEG00000014316	hfm1	100	64.136	Amphiprion_percula
ENSNLEG00000010285	HFM1	67	61.523	ENSATEG00000019181	hfm1	80	60.501	Anabas_testudineus
ENSNLEG00000010285	HFM1	100	57.133	ENSAPLG00000013639	HFM1	100	57.133	Anas_platyrhynchos
ENSNLEG00000010285	HFM1	100	87.352	ENSANAG00000029513	HFM1	100	87.352	Aotus_nancymaae
ENSNLEG00000010285	HFM1	62	62.822	ENSACLG00000009033	hfm1	97	63.842	Astatotilapia_calliptera
ENSNLEG00000010285	HFM1	93	50.293	ENSAMXG00000006108	hfm1	90	50.293	Astyanax_mexicanus
ENSNLEG00000010285	HFM1	100	80.692	ENSBTAG00000020856	HFM1	100	80.692	Bos_taurus
ENSNLEG00000010285	HFM1	100	89.214	ENSCJAG00000001843	HFM1	100	89.214	Callithrix_jacchus
ENSNLEG00000010285	HFM1	100	81.856	ENSCAFG00000020187	HFM1	100	81.856	Canis_familiaris
ENSNLEG00000010285	HFM1	100	83.553	ENSTSYG00000014250	HFM1	100	83.553	Carlito_syrichta
ENSNLEG00000010285	HFM1	99	75.330	ENSCPOG00000007421	HFM1	99	75.330	Cavia_porcellus
ENSNLEG00000010285	HFM1	100	89.074	ENSCCAG00000033206	HFM1	100	89.074	Cebus_capucinus
ENSNLEG00000010285	HFM1	100	91.997	ENSCATG00000030987	HFM1	100	91.997	Cercocebus_atys
ENSNLEG00000010285	HFM1	100	77.471	ENSCLAG00000005173	HFM1	99	77.471	Chinchilla_lanigera
ENSNLEG00000010285	HFM1	68	94.737	ENSCHOG00000011824	-	77	94.737	Choloepus_hoffmanni
ENSNLEG00000010285	HFM1	100	70.661	ENSCGRG00001016995	Hfm1	100	70.661	Cricetulus_griseus_chok1gshd
ENSNLEG00000010285	HFM1	100	74.861	ENSCGRG00000017181	Hfm1	100	74.861	Cricetulus_griseus_crigri
ENSNLEG00000010285	HFM1	70	58.584	ENSCSEG00000017659	hfm1	93	58.584	Cynoglossus_semilaevis
ENSNLEG00000010285	HFM1	50	66.713	ENSCVAG00000005075	hfm1	86	66.713	Cyprinodon_variegatus
ENSNLEG00000010285	HFM1	76	54.291	ENSDARG00000104288	hfm1	96	54.291	Danio_rerio
ENSNLEG00000010285	HFM1	100	77.435	ENSDNOG00000004776	HFM1	100	77.435	Dasypus_novemcinctus
ENSNLEG00000010285	HFM1	100	74.573	ENSDORG00000014661	Hfm1	100	74.573	Dipodomys_ordii
ENSNLEG00000010285	HFM1	70	79.626	ENSEASG00005015424	HFM1	98	85.217	Equus_asinus_asinus
ENSNLEG00000010285	HFM1	100	80.671	ENSECAG00000024039	HFM1	100	80.671	Equus_caballus
ENSNLEG00000010285	HFM1	62	65.414	ENSELUG00000018944	hfm1	97	65.414	Esox_lucius
ENSNLEG00000010285	HFM1	100	82.178	ENSFCAG00000029116	HFM1	100	82.178	Felis_catus
ENSNLEG00000010285	HFM1	100	57.045	ENSFALG00000001781	HFM1	100	57.438	Ficedula_albicollis
ENSNLEG00000010285	HFM1	100	75.703	ENSFDAG00000020816	HFM1	100	75.703	Fukomys_damarensis
ENSNLEG00000010285	HFM1	66	57.884	ENSGMOG00000017436	hfm1	100	57.884	Gadus_morhua
ENSNLEG00000010285	HFM1	71	59.126	ENSGAFG00000018093	hfm1	93	65.301	Gambusia_affinis
ENSNLEG00000010285	HFM1	66	58.660	ENSGACG00000015686	hfm1	100	58.660	Gasterosteus_aculeatus
ENSNLEG00000010285	HFM1	100	93.807	ENSGGOG00000038524	HFM1	100	93.807	Gorilla_gorilla
ENSNLEG00000010285	HFM1	62	63.606	ENSHBUG00000007309	hfm1	96	57.375	Haplochromis_burtoni
ENSNLEG00000010285	HFM1	57	62.577	ENSHCOG00000019632	hfm1	97	62.577	Hippocampus_comes
ENSNLEG00000010285	HFM1	63	63.776	ENSIPUG00000017020	hfm1	92	64.601	Ictalurus_punctatus
ENSNLEG00000010285	HFM1	100	74.896	ENSJJAG00000017198	Hfm1	100	74.896	Jaculus_jaculus
ENSNLEG00000010285	HFM1	62	62.417	ENSKMAG00000002282	hfm1	90	62.486	Kryptolebias_marmoratus
ENSNLEG00000010285	HFM1	70	57.591	ENSLBEG00000006759	hfm1	98	63.850	Labrus_bergylta
ENSNLEG00000010285	HFM1	66	66.598	ENSLACG00000010698	HFM1	99	63.103	Latimeria_chalumnae
ENSNLEG00000010285	HFM1	72	61.678	ENSLOCG00000004931	hfm1	96	61.678	Lepisosteus_oculatus
ENSNLEG00000010285	HFM1	52	87.079	ENSLAFG00000015903	-	99	87.079	Loxodonta_africana
ENSNLEG00000010285	HFM1	100	88.981	ENSMFAG00000003649	HFM1	100	88.981	Macaca_fascicularis
ENSNLEG00000010285	HFM1	100	91.649	ENSMMUG00000006819	HFM1	100	91.649	Macaca_mulatta
ENSNLEG00000010285	HFM1	57	65.538	ENSMAMG00000004623	hfm1	97	65.538	Mastacembelus_armatus
ENSNLEG00000010285	HFM1	62	62.822	ENSMZEG00005004679	hfm1	97	63.842	Maylandia_zebra
ENSNLEG00000010285	HFM1	54	74.490	ENSMGAG00000008437	HFM1	98	74.490	Meleagris_gallopavo
ENSNLEG00000010285	HFM1	100	74.931	ENSMAUG00000018858	Hfm1	100	74.931	Mesocricetus_auratus
ENSNLEG00000010285	HFM1	100	84.525	ENSMICG00000037935	HFM1	100	84.525	Microcebus_murinus
ENSNLEG00000010285	HFM1	100	72.834	ENSMOCG00000014812	Hfm1	100	72.834	Microtus_ochrogaster
ENSNLEG00000010285	HFM1	63	62.058	ENSMMOG00000006148	hfm1	96	62.761	Mola_mola
ENSNLEG00000010285	HFM1	57	67.647	ENSMALG00000002401	hfm1	96	63.944	Monopterus_albus
ENSNLEG00000010285	HFM1	96	71.392	MGP_CAROLIEiJ_G0027496	Hfm1	100	71.392	Mus_caroli
ENSNLEG00000010285	HFM1	100	73.527	ENSMUSG00000043410	Hfm1	100	73.527	Mus_musculus
ENSNLEG00000010285	HFM1	100	73.597	MGP_PahariEiJ_G0017268	Hfm1	100	73.608	Mus_pahari
ENSNLEG00000010285	HFM1	100	73.181	MGP_SPRETEiJ_G0028495	Hfm1	100	73.181	Mus_spretus
ENSNLEG00000010285	HFM1	100	78.054	ENSMPUG00000004594	HFM1	100	78.054	Mustela_putorius_furo
ENSNLEG00000010285	HFM1	100	80.069	ENSMLUG00000010200	HFM1	100	80.069	Myotis_lucifugus
ENSNLEG00000010285	HFM1	62	59.910	ENSNBRG00000002910	hfm1	97	64.320	Neolamprologus_brichardi
ENSNLEG00000010285	HFM1	84	61.485	ENSMEUG00000015788	HFM1	84	61.485	Notamacropus_eugenii
ENSNLEG00000010285	HFM1	84	76.501	ENSOPRG00000013916	HFM1	84	76.501	Ochotona_princeps
ENSNLEG00000010285	HFM1	71	59.591	ENSONIG00000010590	hfm1	99	59.577	Oreochromis_niloticus
ENSNLEG00000010285	HFM1	57	64.663	ENSORLG00000026844	hfm1	99	64.663	Oryzias_latipes
ENSNLEG00000010285	HFM1	67	55.971	ENSORLG00020002951	hfm1	76	55.971	Oryzias_latipes_hni
ENSNLEG00000010285	HFM1	89	50.332	ENSOMEG00000016474	hfm1	90	50.332	Oryzias_melastigma
ENSNLEG00000010285	HFM1	85	84.390	ENSOGAG00000032369	HFM1	100	84.390	Otolemur_garnettii
ENSNLEG00000010285	HFM1	100	80.844	ENSOARG00000015812	HFM1	100	80.844	Ovis_aries
ENSNLEG00000010285	HFM1	92	93.741	ENSPPAG00000024582	HFM1	100	93.741	Pan_paniscus
ENSNLEG00000010285	HFM1	100	82.108	ENSPPRG00000003270	HFM1	100	82.108	Panthera_pardus
ENSNLEG00000010285	HFM1	100	82.039	ENSPTIG00000018881	HFM1	100	82.039	Panthera_tigris_altaica
ENSNLEG00000010285	HFM1	100	93.737	ENSPTRG00000000948	HFM1	100	93.737	Pan_troglodytes
ENSNLEG00000010285	HFM1	100	91.858	ENSPANG00000009838	HFM1	100	91.858	Papio_anubis
ENSNLEG00000010285	HFM1	62	64.831	ENSPKIG00000003810	hfm1	95	65.659	Paramormyrops_kingsleyae
ENSNLEG00000010285	HFM1	57	64.286	ENSPMGG00000011059	hfm1	100	64.286	Periophthalmus_magnuspinnatus
ENSNLEG00000010285	HFM1	100	76.577	ENSPEMG00000022852	Hfm1	100	76.577	Peromyscus_maniculatus_bairdii
ENSNLEG00000010285	HFM1	100	63.691	ENSPCIG00000014233	HFM1	100	63.667	Phascolarctos_cinereus
ENSNLEG00000010285	HFM1	70	59.147	ENSPFOG00000017194	hfm1	99	59.147	Poecilia_formosa
ENSNLEG00000010285	HFM1	71	61.224	ENSPLAG00000000571	hfm1	92	61.224	Poecilia_latipinna
ENSNLEG00000010285	HFM1	71	61.187	ENSPMEG00000019475	hfm1	92	61.187	Poecilia_mexicana
ENSNLEG00000010285	HFM1	70	60.431	ENSPREG00000007803	hfm1	93	65.139	Poecilia_reticulata
ENSNLEG00000010285	HFM1	100	93.389	ENSPPYG00000001163	HFM1	100	93.389	Pongo_abelii
ENSNLEG00000010285	HFM1	67	82.883	ENSPCAG00000004289	-	67	82.883	Procavia_capensis
ENSNLEG00000010285	HFM1	100	74.149	ENSPVAG00000009713	HFM1	100	74.149	Pteropus_vampyrus
ENSNLEG00000010285	HFM1	62	62.598	ENSPNYG00000001795	hfm1	97	63.723	Pundamilia_nyererei
ENSNLEG00000010285	HFM1	59	66.154	ENSPNAG00000010865	hfm1	84	66.154	Pygocentrus_nattereri
ENSNLEG00000010285	HFM1	100	72.765	ENSRNOG00000023299	Hfm1	100	72.765	Rattus_norvegicus
ENSNLEG00000010285	HFM1	100	91.858	ENSRROG00000045569	HFM1	100	91.858	Rhinopithecus_roxellana
ENSNLEG00000010285	HFM1	100	86.708	ENSSBOG00000027456	HFM1	100	86.708	Saimiri_boliviensis_boliviensis
ENSNLEG00000010285	HFM1	60	69.364	ENSSHAG00000014616	-	98	69.364	Sarcophilus_harrisii
ENSNLEG00000010285	HFM1	86	54.272	ENSSFOG00015020129	hfm1	97	54.272	Scleropages_formosus
ENSNLEG00000010285	HFM1	62	63.111	ENSSMAG00000006907	hfm1	87	63.111	Scophthalmus_maximus
ENSNLEG00000010285	HFM1	64	62.850	ENSSDUG00000011424	hfm1	100	62.850	Seriola_dumerili
ENSNLEG00000010285	HFM1	65	63.256	ENSSLDG00000016386	hfm1	100	63.256	Seriola_lalandi_dorsalis
ENSNLEG00000010285	HFM1	62	65.186	ENSSPAG00000001023	hfm1	100	65.186	Stegastes_partitus
ENSNLEG00000010285	HFM1	100	78.121	ENSSSCG00000006912	HFM1	100	78.121	Sus_scrofa
ENSNLEG00000010285	HFM1	66	70.564	ENSTGUG00000006172	HFM1	100	70.564	Taeniopygia_guttata
ENSNLEG00000010285	HFM1	100	78.086	ENSTTRG00000013933	HFM1	100	78.086	Tursiops_truncatus
ENSNLEG00000010285	HFM1	93	79.531	ENSVPAG00000011331	HFM1	93	79.531	Vicugna_pacos
ENSNLEG00000010285	HFM1	70	77.264	ENSVVUG00000020760	HFM1	96	82.135	Vulpes_vulpes
ENSNLEG00000010285	HFM1	58	65.119	ENSXMAG00000004178	hfm1	92	65.119	Xiphophorus_maculatus