EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000010313 (Gene tree)
Gene ID: 100598331
Gene Symbol: ALYREF
Alias: ALY|ALY/REF|BEF|REF|THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 4456 bases
Position: chrGL397704.2:38055-42510
Accession: 100598331
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000012561	RRM_1	PF00076.22	1.8e-13	1	1
ENSNLEP00000041346	RRM_1	PF00076.22	2.1e-13	1	1
ENSNLEP00000036279	RRM_1	PF00076.22	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000045749	ALYREF-202	858	-	ENSNLEP00000041346	285 (aa)	-	A0A2I3HD09
ENSNLET00000013174	ALYREF-201	1357	XM_003282165	ENSNLEP00000012561	264 (aa)	XP_003282213	G1RH61
ENSNLET00000051873	ALYREF-203	570	-	ENSNLEP00000036279	189 (aa)	-	A0A2I3GY38

Gene Model

Click here to download ENSNLEG00000010313's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03013	RNA transport	KEGG
nle03015	mRNA surveillance pathway	KEGG
nle03040	Spliceosome	KEGG
nle05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000010313's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000010313	ALYREF	100	99.621	ENSG00000183684	ALYREF	100	99.621	Homo_sapiens
ENSNLEG00000010313	ALYREF	97	68.345	ENSAPOG00000018455	ALYREF	100	72.302	Acanthochromis_polyacanthus
ENSNLEG00000010313	ALYREF	78	86.190	ENSAMEG00000017463	ALYREF	74	91.848	Ailuropoda_melanoleuca
ENSNLEG00000010313	ALYREF	97	75.954	ENSACAG00000010526	ALYREF	100	74.046	Anolis_carolinensis
ENSNLEG00000010313	ALYREF	67	97.740	ENSANAG00000022638	-	75	97.740	Aotus_nancymaae
ENSNLEG00000010313	ALYREF	100	84.470	ENSANAG00000028229	-	80	85.227	Aotus_nancymaae
ENSNLEG00000010313	ALYREF	97	98.444	ENSBTAG00000008498	ALYREF	100	98.444	Bos_taurus
ENSNLEG00000010313	ALYREF	100	98.942	ENSCJAG00000039942	ALYREF	100	98.942	Callithrix_jacchus
ENSNLEG00000010313	ALYREF	97	97.665	ENSCAFG00000005877	ALYREF	100	97.665	Canis_familiaris
ENSNLEG00000010313	ALYREF	97	97.665	ENSCAFG00020009815	ALYREF	100	97.665	Canis_lupus_dingo
ENSNLEG00000010313	ALYREF	97	97.674	ENSCHIG00000017396	ALYREF	97	97.683	Capra_hircus
ENSNLEG00000010313	ALYREF	85	83.117	ENSTSYG00000002272	ALYREF	72	95.652	Carlito_syrichta
ENSNLEG00000010313	ALYREF	51	96.269	ENSCAPG00000014727	-	100	96.269	Cavia_aperea
ENSNLEG00000010313	ALYREF	97	97.276	ENSCPOG00000013710	ALYREF	100	97.276	Cavia_porcellus
ENSNLEG00000010313	ALYREF	100	99.242	ENSCCAG00000020578	-	100	99.242	Cebus_capucinus
ENSNLEG00000010313	ALYREF	93	85.714	ENSCCAG00000030237	-	100	73.541	Cebus_capucinus
ENSNLEG00000010313	ALYREF	100	99.621	ENSCATG00000033169	ALYREF	100	99.621	Cercocebus_atys
ENSNLEG00000010313	ALYREF	97	88.716	ENSCLAG00000015026	ALYREF	100	88.716	Chinchilla_lanigera
ENSNLEG00000010313	ALYREF	100	99.621	ENSCSAG00000002216	ALYREF	100	99.621	Chlorocebus_sabaeus
ENSNLEG00000010313	ALYREF	69	96.685	ENSCANG00000034056	ALYREF	90	89.888	Colobus_angolensis_palliatus
ENSNLEG00000010313	ALYREF	97	94.553	ENSCGRG00001018191	-	100	92.607	Cricetulus_griseus_chok1gshd
ENSNLEG00000010313	ALYREF	72	91.623	ENSCGRG00000015871	-	90	87.097	Cricetulus_griseus_crigri
ENSNLEG00000010313	ALYREF	100	51.777	ENSCSEG00000015438	-	98	54.187	Cynoglossus_semilaevis
ENSNLEG00000010313	ALYREF	67	96.067	ENSDNOG00000002563	ALYREF	75	96.067	Dasypus_novemcinctus
ENSNLEG00000010313	ALYREF	85	83.111	ENSDORG00000025849	-	73	96.667	Dipodomys_ordii
ENSNLEG00000010313	ALYREF	67	93.820	ENSETEG00000016596	ALYREF	100	93.258	Echinops_telfairi
ENSNLEG00000010313	ALYREF	100	97.348	ENSEASG00005005824	ALYREF	98	97.348	Equus_asinus_asinus
ENSNLEG00000010313	ALYREF	100	97.348	ENSECAG00000018754	ALYREF	98	97.348	Equus_caballus
ENSNLEG00000010313	ALYREF	91	97.674	ENSEEUG00000010164	ALYREF	100	97.674	Erinaceus_europaeus
ENSNLEG00000010313	ALYREF	99	98.092	ENSFCAG00000022549	ALYREF	99	98.092	Felis_catus
ENSNLEG00000010313	ALYREF	78	87.864	ENSFDAG00000001213	ALYREF	95	85.782	Fukomys_damarensis
ENSNLEG00000010313	ALYREF	97	84.170	ENSGALG00000007237	ALYREF	100	83.784	Gallus_gallus
ENSNLEG00000010313	ALYREF	97	70.566	ENSGACG00000013328	ALYREF	100	72.556	Gasterosteus_aculeatus
ENSNLEG00000010313	ALYREF	97	83.206	ENSGAGG00000008536	ALYREF	100	82.443	Gopherus_agassizii
ENSNLEG00000010313	ALYREF	100	100.000	ENSGGOG00000013935	ALYREF	100	100.000	Gorilla_gorilla
ENSNLEG00000010313	ALYREF	100	97.884	ENSHGLG00000008293	ALYREF	100	97.884	Heterocephalus_glaber_female
ENSNLEG00000010313	ALYREF	78	81.057	ENSHGLG00100006949	ALYREF	77	93.923	Heterocephalus_glaber_male
ENSNLEG00000010313	ALYREF	97	68.165	ENSHCOG00000015046	ALYREF	100	69.485	Hippocampus_comes
ENSNLEG00000010313	ALYREF	97	94.163	ENSJJAG00000004134	-	100	94.163	Jaculus_jaculus
ENSNLEG00000010313	ALYREF	97	70.833	ENSLACG00000005694	ALYREF	100	71.212	Latimeria_chalumnae
ENSNLEG00000010313	ALYREF	71	94.681	ENSLAFG00000003083	ALYREF	98	93.478	Loxodonta_africana
ENSNLEG00000010313	ALYREF	100	96.970	ENSMFAG00000001394	ALYREF	100	96.970	Macaca_fascicularis
ENSNLEG00000010313	ALYREF	100	99.621	ENSMMUG00000012884	ALYREF	100	99.621	Macaca_mulatta
ENSNLEG00000010313	ALYREF	100	99.621	ENSMNEG00000043666	ALYREF	100	99.621	Macaca_nemestrina
ENSNLEG00000010313	ALYREF	70	88.421	ENSMLEG00000043353	ALYREF	94	81.281	Mandrillus_leucophaeus
ENSNLEG00000010313	ALYREF	97	78.988	ENSMAUG00000020552	-	100	73.308	Mesocricetus_auratus
ENSNLEG00000010313	ALYREF	100	98.942	ENSMICG00000017403	ALYREF	100	98.942	Microcebus_murinus
ENSNLEG00000010313	ALYREF	97	82.955	ENSMOCG00000016792	-	100	81.818	Microtus_ochrogaster
ENSNLEG00000010313	ALYREF	97	95.720	ENSMODG00000003030	ALYREF	93	88.772	Monodelphis_domestica
ENSNLEG00000010313	ALYREF	97	69.455	ENSMALG00000019408	ALYREF	100	72.364	Monopterus_albus
ENSNLEG00000010313	ALYREF	97	96.498	MGP_CAROLIEiJ_G0017529	Alyref	100	96.498	Mus_caroli
ENSNLEG00000010313	ALYREF	97	73.930	MGP_CAROLIEiJ_G0014874	Alyref2	100	70.817	Mus_caroli
ENSNLEG00000010313	ALYREF	91	65.698	ENSMUSG00000112856	Gm4305	63	64.706	Mus_musculus
ENSNLEG00000010313	ALYREF	97	96.498	ENSMUSG00000025134	Alyref	100	96.498	Mus_musculus
ENSNLEG00000010313	ALYREF	91	65.698	ENSMUSG00000091101	Gm4302	62	64.706	Mus_musculus
ENSNLEG00000010313	ALYREF	91	63.953	ENSMUSG00000096640	Gm4312	63	63.235	Mus_musculus
ENSNLEG00000010313	ALYREF	98	61.888	ENSMUSG00000097427	Gm6763	99	60.479	Mus_musculus
ENSNLEG00000010313	ALYREF	98	61.888	ENSMUSG00000095022	Gm20765	100	53.873	Mus_musculus
ENSNLEG00000010313	ALYREF	97	62.105	ENSMUSG00000097550	Gm21304	100	53.873	Mus_musculus
ENSNLEG00000010313	ALYREF	91	65.698	ENSMUSG00000096744	Gm4307	63	64.706	Mus_musculus
ENSNLEG00000010313	ALYREF	98	61.888	ENSMUSG00000094144	Gm21312	100	53.873	Mus_musculus
ENSNLEG00000010313	ALYREF	98	61.888	ENSMUSG00000097878	Gm8764	99	60.479	Mus_musculus
ENSNLEG00000010313	ALYREF	97	61.654	ENSMUSG00000086727	4931428L18Rik	100	58.333	Mus_musculus
ENSNLEG00000010313	ALYREF	98	61.034	ENSMUSG00000090854	Gm4340	100	52.778	Mus_musculus
ENSNLEG00000010313	ALYREF	97	61.278	ENSMUSG00000117091	AC153137.1	100	57.576	Mus_musculus
ENSNLEG00000010313	ALYREF	97	62.105	ENSMUSG00000091779	Gm21293	100	53.873	Mus_musculus
ENSNLEG00000010313	ALYREF	97	74.031	ENSMUSG00000060244	Alyref2	100	72.481	Mus_musculus
ENSNLEG00000010313	ALYREF	91	65.698	ENSMUSG00000112931	Gm4303	63	64.706	Mus_musculus
ENSNLEG00000010313	ALYREF	91	63.953	ENSMUSG00000094314	Gm4301	63	63.235	Mus_musculus
ENSNLEG00000010313	ALYREF	95	93.296	MGP_PahariEiJ_G0018656	-	99	97.884	Mus_pahari
ENSNLEG00000010313	ALYREF	97	96.498	MGP_PahariEiJ_G0018655	-	100	96.498	Mus_pahari
ENSNLEG00000010313	ALYREF	91	64.535	MGP_PahariEiJ_G0027254	-	84	66.184	Mus_pahari
ENSNLEG00000010313	ALYREF	91	64.535	MGP_PahariEiJ_G0027255	-	82	66.184	Mus_pahari
ENSNLEG00000010313	ALYREF	97	73.643	MGP_SPRETEiJ_G0015679	Alyref2	100	72.093	Mus_spretus
ENSNLEG00000010313	ALYREF	97	96.498	MGP_SPRETEiJ_G0018373	Alyref	100	96.498	Mus_spretus
ENSNLEG00000010313	ALYREF	55	72.115	MGP_SPRETEiJ_G0016590	-	55	77.419	Mus_spretus
ENSNLEG00000010313	ALYREF	97	61.202	ENSMLUG00000030407	-	77	60.000	Myotis_lucifugus
ENSNLEG00000010313	ALYREF	97	62.842	ENSMLUG00000025677	-	77	61.176	Myotis_lucifugus
ENSNLEG00000010313	ALYREF	95	61.111	ENSMLUG00000024447	-	76	60.714	Myotis_lucifugus
ENSNLEG00000010313	ALYREF	97	60.656	ENSMLUG00000024976	-	79	59.684	Myotis_lucifugus
ENSNLEG00000010313	ALYREF	95	69.841	ENSMLUG00000027516	-	78	67.063	Myotis_lucifugus
ENSNLEG00000010313	ALYREF	90	62.791	ENSMLUG00000023213	-	72	53.476	Myotis_lucifugus
ENSNLEG00000010313	ALYREF	97	59.239	ENSMLUG00000022869	-	71	62.802	Myotis_lucifugus
ENSNLEG00000010313	ALYREF	82	58.904	ENSMLUG00000028343	-	85	64.607	Myotis_lucifugus
ENSNLEG00000010313	ALYREF	80	82.710	ENSMLUG00000009555	-	66	92.697	Myotis_lucifugus
ENSNLEG00000010313	ALYREF	97	55.978	ENSMLUG00000015043	-	98	52.510	Myotis_lucifugus
ENSNLEG00000010313	ALYREF	95	62.698	ENSMLUG00000027352	-	80	61.390	Myotis_lucifugus
ENSNLEG00000010313	ALYREF	97	57.065	ENSMLUG00000024471	-	82	52.874	Myotis_lucifugus
ENSNLEG00000010313	ALYREF	97	65.405	ENSMLUG00000002626	-	98	65.504	Myotis_lucifugus
ENSNLEG00000010313	ALYREF	97	61.749	ENSMLUG00000026271	-	79	62.151	Myotis_lucifugus
ENSNLEG00000010313	ALYREF	80	74.286	ENSMEUG00000002210	ALYREF	92	74.286	Notamacropus_eugenii
ENSNLEG00000010313	ALYREF	51	91.791	ENSOPRG00000005551	-	52	90.299	Ochotona_princeps
ENSNLEG00000010313	ALYREF	97	96.538	ENSODEG00000008359	ALYREF	100	96.538	Octodon_degus
ENSNLEG00000010313	ALYREF	97	69.091	ENSORLG00000012331	ALYREF	100	71.636	Oryzias_latipes
ENSNLEG00000010313	ALYREF	75	89.899	ENSOGAG00000012409	ALYREF	76	94.444	Otolemur_garnettii
ENSNLEG00000010313	ALYREF	67	97.753	ENSOARG00000017932	ALYREF	67	97.753	Ovis_aries
ENSNLEG00000010313	ALYREF	99	98.092	ENSPPRG00000010829	ALYREF	99	98.092	Panthera_pardus
ENSNLEG00000010313	ALYREF	55	97.931	ENSPTIG00000006399	ALYREF	81	97.931	Panthera_tigris_altaica
ENSNLEG00000010313	ALYREF	100	100.000	ENSPTRG00000009774	ALYREF	100	100.000	Pan_troglodytes
ENSNLEG00000010313	ALYREF	100	99.621	ENSPANG00000019265	ALYREF	100	99.621	Papio_anubis
ENSNLEG00000010313	ALYREF	50	92.481	ENSPSIG00000017541	ALYREF	99	93.284	Pelodiscus_sinensis
ENSNLEG00000010313	ALYREF	100	99.621	ENSPPYG00000008749	ALYREF	100	99.621	Pongo_abelii
ENSNLEG00000010313	ALYREF	100	98.942	ENSPCOG00000020874	ALYREF	100	98.942	Propithecus_coquereli
ENSNLEG00000010313	ALYREF	97	79.377	ENSPVAG00000017866	ALYREF	100	79.377	Pteropus_vampyrus
ENSNLEG00000010313	ALYREF	100	97.884	ENSRNOG00000036687	Alyref	100	97.884	Rattus_norvegicus
ENSNLEG00000010313	ALYREF	69	96.685	ENSRBIG00000039651	ALYREF	74	96.685	Rhinopithecus_bieti
ENSNLEG00000010313	ALYREF	88	91.810	ENSRROG00000045364	ALYREF	83	97.630	Rhinopithecus_roxellana
ENSNLEG00000010313	ALYREF	73	93.264	ENSSHAG00000010459	ALYREF	95	95.109	Sarcophilus_harrisii
ENSNLEG00000010313	ALYREF	97	52.158	ENSSDUG00000003992	-	100	53.381	Seriola_dumerili
ENSNLEG00000010313	ALYREF	97	53.091	ENSSLDG00000005386	-	100	53.957	Seriola_lalandi_dorsalis
ENSNLEG00000010313	ALYREF	97	82.443	ENSSPUG00000004600	ALYREF	100	80.534	Sphenodon_punctatus
ENSNLEG00000010313	ALYREF	97	68.459	ENSSPAG00000011178	ALYREF	97	70.251	Stegastes_partitus
ENSNLEG00000010313	ALYREF	97	97.665	ENSSSCG00000032655	ALYREF	100	97.665	Sus_scrofa
ENSNLEG00000010313	ALYREF	50	93.939	ENSTGUG00000003513	ALYREF	99	93.985	Taeniopygia_guttata
ENSNLEG00000010313	ALYREF	97	69.485	ENSTRUG00000008828	ALYREF	100	68.635	Takifugu_rubripes
ENSNLEG00000010313	ALYREF	67	96.067	ENSTBEG00000005834	ALYREF	100	96.067	Tupaia_belangeri
ENSNLEG00000010313	ALYREF	97	96.498	ENSTTRG00000012275	ALYREF	100	96.498	Tursiops_truncatus
ENSNLEG00000010313	ALYREF	67	83.051	ENSUAMG00000016931	ALYREF	66	81.461	Ursus_americanus
ENSNLEG00000010313	ALYREF	67	83.051	ENSUMAG00000016384	ALYREF	65	81.461	Ursus_maritimus
ENSNLEG00000010313	ALYREF	97	75.581	ENSXETG00000005391	alyref	100	74.131	Xenopus_tropicalis