EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000010633 (Gene tree)
Gene ID: 100591404
Gene Symbol: -
Alias: -
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 15581 bases
Position: chr16:99439544-99455124
Accession: 100591404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000012922	CPSF_A	PF03178.15	2e-38	1	1
ENSNLEP00000028635	CPSF_A	PF03178.15	1.7e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000060140	-	615	-	ENSNLEP00000028635	204 (aa)	-	A0A2I3GBG9
ENSNLET00000013558	-	3528	XM_004093220	ENSNLEP00000012922	1175 (aa)	XP_004093268	G1RI66

Gene Model

Click here to download ENSNLEG00000010633's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000010633's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000010633	-	100	98.039	ENSG00000071894	CPSF1	100	98.039	Homo_sapiens
ENSNLEG00000010633	-	94	87.261	ENSAPOG00000019621	cpsf1	79	87.261	Acanthochromis_polyacanthus
ENSNLEG00000010633	-	95	84.275	ENSAMEG00000005557	CPSF1	85	84.275	Ailuropoda_melanoleuca
ENSNLEG00000010633	-	100	79.630	ENSACIG00000006112	cpsf1	86	68.468	Amphilophus_citrinellus
ENSNLEG00000010633	-	100	80.556	ENSAOCG00000007120	cpsf1	86	69.820	Amphiprion_ocellaris
ENSNLEG00000010633	-	100	80.556	ENSAPEG00000005755	cpsf1	86	69.820	Amphiprion_percula
ENSNLEG00000010633	-	100	80.093	ENSATEG00000011097	cpsf1	86	69.369	Anabas_testudineus
ENSNLEG00000010633	-	90	90.517	ENSACAG00000009655	CPSF1	85	90.517	Anolis_carolinensis
ENSNLEG00000010633	-	100	90.278	ENSANAG00000036514	CPSF1	86	87.303	Aotus_nancymaae
ENSNLEG00000010633	-	94	86.624	ENSACLG00000012231	cpsf1	81	86.624	Astatotilapia_calliptera
ENSNLEG00000010633	-	100	79.630	ENSAMXG00000008485	cpsf1	87	69.369	Astyanax_mexicanus
ENSNLEG00000010633	-	99	84.381	ENSBTAG00000008355	CPSF1	86	84.133	Bos_taurus
ENSNLEG00000010633	-	94	38.095	WBGene00022301	cpsf-1	98	33.945	Caenorhabditis_elegans
ENSNLEG00000010633	-	100	89.815	ENSCJAG00000021421	CPSF1	86	87.106	Callithrix_jacchus
ENSNLEG00000010633	-	100	88.426	ENSCAFG00000001600	CPSF1	85	83.282	Canis_familiaris
ENSNLEG00000010633	-	100	88.426	ENSCAFG00020020821	CPSF1	86	84.676	Canis_lupus_dingo
ENSNLEG00000010633	-	99	83.028	ENSCHIG00000015833	CPSF1	87	82.788	Capra_hircus
ENSNLEG00000010633	-	100	96.078	ENSTSYG00000028560	CPSF1	100	96.078	Carlito_syrichta
ENSNLEG00000010633	-	100	88.889	ENSCAPG00000014921	CPSF1	84	82.080	Cavia_aperea
ENSNLEG00000010633	-	100	88.889	ENSCPOG00000011448	CPSF1	86	82.237	Cavia_porcellus
ENSNLEG00000010633	-	100	95.610	ENSCCAG00000037658	CPSF1	100	95.610	Cebus_capucinus
ENSNLEG00000010633	-	100	99.020	ENSCATG00000037234	CPSF1	100	99.020	Cercocebus_atys
ENSNLEG00000010633	-	100	88.889	ENSCLAG00000012166	CPSF1	86	85.222	Chinchilla_lanigera
ENSNLEG00000010633	-	100	90.278	ENSCSAG00000008502	CPSF1	86	87.303	Chlorocebus_sabaeus
ENSNLEG00000010633	-	94	91.720	ENSCPBG00000018910	CPSF1	79	91.720	Chrysemys_picta_bellii
ENSNLEG00000010633	-	94	49.682	ENSCING00000000514	-	86	49.682	Ciona_intestinalis
ENSNLEG00000010633	-	99	45.540	ENSCSAVG00000002293	-	98	45.540	Ciona_savignyi
ENSNLEG00000010633	-	100	99.020	ENSCANG00000032760	CPSF1	100	99.020	Colobus_angolensis_palliatus
ENSNLEG00000010633	-	100	88.426	ENSCGRG00001016344	Cpsf1	86	84.631	Cricetulus_griseus_chok1gshd
ENSNLEG00000010633	-	100	88.426	ENSCGRG00000003118	Cpsf1	86	80.803	Cricetulus_griseus_crigri
ENSNLEG00000010633	-	100	76.852	ENSCSEG00000013464	cpsf1	86	65.789	Cynoglossus_semilaevis
ENSNLEG00000010633	-	100	81.463	ENSCVAG00000014059	cpsf1	100	81.463	Cyprinodon_variegatus
ENSNLEG00000010633	-	100	79.167	ENSDARG00000034178	cpsf1	86	68.919	Danio_rerio
ENSNLEG00000010633	-	51	93.274	ENSDNOG00000043654	CPSF1	77	93.274	Dasypus_novemcinctus
ENSNLEG00000010633	-	100	88.426	ENSDORG00000006278	Cpsf1	85	83.316	Dipodomys_ordii
ENSNLEG00000010633	-	89	56.962	FBgn0024698	Cpsf160	76	56.962	Drosophila_melanogaster
ENSNLEG00000010633	-	91	96.212	ENSETEG00000006022	CPSF1	82	96.212	Echinops_telfairi
ENSNLEG00000010633	-	90	62.245	ENSEBUG00000006844	-	50	62.245	Eptatretus_burgeri
ENSNLEG00000010633	-	100	88.426	ENSEASG00005010774	CPSF1	86	85.211	Equus_asinus_asinus
ENSNLEG00000010633	-	100	88.426	ENSECAG00000022209	CPSF1	86	85.462	Equus_caballus
ENSNLEG00000010633	-	100	87.963	ENSEEUG00000000471	CPSF1	86	82.336	Erinaceus_europaeus
ENSNLEG00000010633	-	100	79.630	ENSELUG00000012271	cpsf1	86	68.468	Esox_lucius
ENSNLEG00000010633	-	100	88.889	ENSFDAG00000016060	CPSF1	86	84.926	Fukomys_damarensis
ENSNLEG00000010633	-	100	75.463	ENSFHEG00000016801	cpsf1	86	65.315	Fundulus_heteroclitus
ENSNLEG00000010633	-	100	78.704	ENSGMOG00000000796	cpsf1	86	66.667	Gadus_morhua
ENSNLEG00000010633	-	89	64.469	ENSGAFG00000018890	cpsf1	82	64.665	Gambusia_affinis
ENSNLEG00000010633	-	100	78.704	ENSGACG00000008703	cpsf1	86	67.117	Gasterosteus_aculeatus
ENSNLEG00000010633	-	99	74.213	ENSGAGG00000004276	CPSF1	81	93.750	Gopherus_agassizii
ENSNLEG00000010633	-	100	98.529	ENSGGOG00000016185	CPSF1	100	98.529	Gorilla_gorilla
ENSNLEG00000010633	-	85	70.690	ENSGGOG00000040487	-	100	57.798	Gorilla_gorilla
ENSNLEG00000010633	-	100	79.167	ENSHBUG00000018900	cpsf1	86	69.369	Haplochromis_burtoni
ENSNLEG00000010633	-	100	88.426	ENSHGLG00000016139	CPSF1	86	84.828	Heterocephalus_glaber_female
ENSNLEG00000010633	-	100	88.426	ENSHGLG00100009750	CPSF1	86	84.729	Heterocephalus_glaber_male
ENSNLEG00000010633	-	100	77.778	ENSHCOG00000018509	cpsf1	86	69.369	Hippocampus_comes
ENSNLEG00000010633	-	94	87.261	ENSIPUG00000011259	cpsf1	83	87.261	Ictalurus_punctatus
ENSNLEG00000010633	-	100	88.889	ENSSTOG00000009957	CPSF1	85	84.205	Ictidomys_tridecemlineatus
ENSNLEG00000010633	-	100	87.963	ENSJJAG00000023002	Cpsf1	86	84.926	Jaculus_jaculus
ENSNLEG00000010633	-	100	75.926	ENSKMAG00000001940	cpsf1	92	64.474	Kryptolebias_marmoratus
ENSNLEG00000010633	-	100	78.704	ENSLBEG00000003601	cpsf1	86	69.955	Labrus_bergylta
ENSNLEG00000010633	-	100	82.407	ENSLACG00000000233	CPSF1	76	74.870	Latimeria_chalumnae
ENSNLEG00000010633	-	100	81.651	ENSLOCG00000008484	cpsf1	86	72.444	Lepisosteus_oculatus
ENSNLEG00000010633	-	100	87.500	ENSLAFG00000022601	CPSF1	85	83.213	Loxodonta_africana
ENSNLEG00000010633	-	100	99.020	ENSMFAG00000037013	CPSF1	100	99.020	Macaca_fascicularis
ENSNLEG00000010633	-	100	99.020	ENSMMUG00000007380	CPSF1	100	99.020	Macaca_mulatta
ENSNLEG00000010633	-	100	99.020	ENSMNEG00000043564	CPSF1	100	99.020	Macaca_nemestrina
ENSNLEG00000010633	-	100	99.020	ENSMLEG00000043010	CPSF1	100	99.020	Mandrillus_leucophaeus
ENSNLEG00000010633	-	100	80.093	ENSMAMG00000003803	cpsf1	86	69.369	Mastacembelus_armatus
ENSNLEG00000010633	-	100	79.167	ENSMZEG00005001168	cpsf1	85	69.369	Maylandia_zebra
ENSNLEG00000010633	-	100	88.889	ENSMAUG00000003601	Cpsf1	86	84.631	Mesocricetus_auratus
ENSNLEG00000010633	-	100	88.889	ENSMICG00000015767	CPSF1	86	86.108	Microcebus_murinus
ENSNLEG00000010633	-	100	89.352	ENSMOCG00000022758	Cpsf1	86	85.075	Microtus_ochrogaster
ENSNLEG00000010633	-	100	78.241	ENSMMOG00000021245	cpsf1	86	68.919	Mola_mola
ENSNLEG00000010633	-	100	87.500	ENSMODG00000010755	CPSF1	86	79.825	Monodelphis_domestica
ENSNLEG00000010633	-	94	85.350	ENSMALG00000020545	cpsf1	80	85.350	Monopterus_albus
ENSNLEG00000010633	-	100	88.889	MGP_CAROLIEiJ_G0019936	Cpsf1	86	85.025	Mus_caroli
ENSNLEG00000010633	-	94	97.452	ENSMUSG00000034022	Cpsf1	81	97.452	Mus_musculus
ENSNLEG00000010633	-	100	88.889	MGP_PahariEiJ_G0019946	Cpsf1	86	84.828	Mus_pahari
ENSNLEG00000010633	-	100	88.889	MGP_SPRETEiJ_G0020839	Cpsf1	86	84.926	Mus_spretus
ENSNLEG00000010633	-	87	97.452	ENSMPUG00000006419	CPSF1	76	97.452	Mustela_putorius_furo
ENSNLEG00000010633	-	78	97.484	ENSMLUG00000000667	-	88	97.484	Myotis_lucifugus
ENSNLEG00000010633	-	100	88.426	ENSNGAG00000022460	Cpsf1	86	85.025	Nannospalax_galili
ENSNLEG00000010633	-	100	79.167	ENSNBRG00000000813	cpsf1	85	69.369	Neolamprologus_brichardi
ENSNLEG00000010633	-	84	96.512	ENSMEUG00000014922	CPSF1	82	76.278	Notamacropus_eugenii
ENSNLEG00000010633	-	50	86.408	ENSOPRG00000004693	-	55	74.042	Ochotona_princeps
ENSNLEG00000010633	-	100	88.889	ENSODEG00000013995	CPSF1	86	85.320	Octodon_degus
ENSNLEG00000010633	-	100	78.704	ENSONIG00000007676	cpsf1	86	69.369	Oreochromis_niloticus
ENSNLEG00000010633	-	63	95.455	ENSOANG00000010716	CPSF1	85	95.455	Ornithorhynchus_anatinus
ENSNLEG00000010633	-	94	85.987	ENSORLG00000013544	cpsf1	80	85.987	Oryzias_latipes
ENSNLEG00000010633	-	94	85.987	ENSORLG00020021693	cpsf1	80	85.987	Oryzias_latipes_hni
ENSNLEG00000010633	-	100	77.778	ENSORLG00015009979	cpsf1	86	69.058	Oryzias_latipes_hsok
ENSNLEG00000010633	-	100	77.778	ENSOMEG00000011849	cpsf1	86	69.507	Oryzias_melastigma
ENSNLEG00000010633	-	100	88.889	ENSOGAG00000000315	CPSF1	86	85.925	Otolemur_garnettii
ENSNLEG00000010633	-	100	98.529	ENSPPAG00000019280	CPSF1	100	98.529	Pan_paniscus
ENSNLEG00000010633	-	100	98.529	ENSPTRG00000051253	-	100	98.529	Pan_troglodytes
ENSNLEG00000010633	-	100	98.529	ENSPTRG00000049288	-	100	98.529	Pan_troglodytes
ENSNLEG00000010633	-	85	69.540	ENSPTRG00000052516	-	100	57.207	Pan_troglodytes
ENSNLEG00000010633	-	100	98.529	ENSPANG00000015005	CPSF1	100	98.529	Papio_anubis
ENSNLEG00000010633	-	94	89.809	ENSPKIG00000002582	cpsf1	82	89.809	Paramormyrops_kingsleyae
ENSNLEG00000010633	-	100	75.926	ENSPMGG00000022177	-	100	75.926	Periophthalmus_magnuspinnatus
ENSNLEG00000010633	-	94	96.178	ENSPCIG00000009035	CPSF1	81	96.178	Phascolarctos_cinereus
ENSNLEG00000010633	-	100	76.389	ENSPFOG00000012870	cpsf1	86	66.667	Poecilia_formosa
ENSNLEG00000010633	-	100	75.926	ENSPREG00000016307	cpsf1	86	66.216	Poecilia_reticulata
ENSNLEG00000010633	-	100	87.037	ENSPPYG00000018973	CPSF1	86	80.645	Pongo_abelii
ENSNLEG00000010633	-	100	83.796	ENSPCAG00000011541	CPSF1	85	80.168	Procavia_capensis
ENSNLEG00000010633	-	100	95.098	ENSPCOG00000020001	CPSF1	100	95.098	Propithecus_coquereli
ENSNLEG00000010633	-	89	97.452	ENSPVAG00000006761	CPSF1	78	97.452	Pteropus_vampyrus
ENSNLEG00000010633	-	100	79.167	ENSPNYG00000004906	cpsf1	86	69.369	Pundamilia_nyererei
ENSNLEG00000010633	-	99	67.032	ENSPNAG00000024395	cpsf1	85	67.032	Pygocentrus_nattereri
ENSNLEG00000010633	-	100	88.426	ENSRNOG00000030705	Cpsf1	89	85.460	Rattus_norvegicus
ENSNLEG00000010633	-	100	98.529	ENSRBIG00000044907	CPSF1	100	98.529	Rhinopithecus_bieti
ENSNLEG00000010633	-	100	98.529	ENSRROG00000044861	CPSF1	100	98.529	Rhinopithecus_roxellana
ENSNLEG00000010633	-	100	90.278	ENSSBOG00000027177	CPSF1	85	86.777	Saimiri_boliviensis_boliviensis
ENSNLEG00000010633	-	100	87.037	ENSSHAG00000006500	CPSF1	86	79.532	Sarcophilus_harrisii
ENSNLEG00000010633	-	100	81.944	ENSSFOG00015004606	cpsf1	86	71.622	Scleropages_formosus
ENSNLEG00000010633	-	100	80.556	ENSSMAG00000020547	cpsf1	86	69.820	Scophthalmus_maximus
ENSNLEG00000010633	-	100	80.093	ENSSDUG00000001100	cpsf1	86	69.369	Seriola_dumerili
ENSNLEG00000010633	-	100	80.093	ENSSLDG00000003619	cpsf1	86	69.369	Seriola_lalandi_dorsalis
ENSNLEG00000010633	-	84	97.917	ENSSARG00000003643	CPSF1	76	97.917	Sorex_araneus
ENSNLEG00000010633	-	100	88.725	ENSSPUG00000014396	CPSF1	100	88.725	Sphenodon_punctatus
ENSNLEG00000010633	-	100	80.093	ENSSPAG00000005349	cpsf1	86	69.820	Stegastes_partitus
ENSNLEG00000010633	-	100	88.426	ENSSSCG00000005906	CPSF1	86	83.643	Sus_scrofa
ENSNLEG00000010633	-	100	76.852	ENSTRUG00000013134	cpsf1	85	67.568	Takifugu_rubripes
ENSNLEG00000010633	-	94	83.648	ENSTNIG00000014027	cpsf1	86	66.964	Tetraodon_nigroviridis
ENSNLEG00000010633	-	73	78.313	ENSTBEG00000001756	CPSF1	74	78.313	Tupaia_belangeri
ENSNLEG00000010633	-	100	88.426	ENSTTRG00000001937	CPSF1	76	89.542	Tursiops_truncatus
ENSNLEG00000010633	-	100	88.426	ENSUAMG00000006476	CPSF1	84	84.362	Ursus_americanus
ENSNLEG00000010633	-	100	93.627	ENSVVUG00000005940	-	100	93.627	Vulpes_vulpes
ENSNLEG00000010633	-	100	75.926	ENSXCOG00000003608	cpsf1	86	66.667	Xiphophorus_couchianus
ENSNLEG00000010633	-	100	76.389	ENSXMAG00000005798	cpsf1	86	66.667	Xiphophorus_maculatus