EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000010839 (Gene tree)
Gene ID: 100592412
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 2626 bases
Position: chr22a:43658787-43661412
Accession: 100592412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000042057	Exo_endo_phos	PF03372.23	4.8e-22	1	1
ENSNLEP00000013259	Exo_endo_phos	PF03372.23	9.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000013913	APEX1-201	1555	XM_003280888	ENSNLEP00000013259	318 (aa)	XP_003280936	G1RJ52
ENSNLET00000058931	APEX1-202	942	-	ENSNLEP00000042057	313 (aa)	-	A0A2I3HEY4
ENSNLET00000044312	APEX1-203	45	-	ENSNLEP00000028508	14 (aa)	-	A0A2I3GB46

Gene Model

Click here to download ENSNLEG00000010839's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000010839's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000010839	APEX1	100	98.428	ENSG00000100823	APEX1	100	98.428	Homo_sapiens
ENSNLEG00000010839	APEX1	89	69.176	ENSAPOG00000017002	apex1	91	69.176	Acanthochromis_polyacanthus
ENSNLEG00000010839	APEX1	100	95.597	ENSAMEG00000005418	APEX1	100	95.597	Ailuropoda_melanoleuca
ENSNLEG00000010839	APEX1	89	70.863	ENSACIG00000010653	apex1	94	70.968	Amphilophus_citrinellus
ENSNLEG00000010839	APEX1	89	69.176	ENSAOCG00000009649	apex1	90	69.176	Amphiprion_ocellaris
ENSNLEG00000010839	APEX1	89	69.176	ENSAPEG00000021453	apex1	90	69.176	Amphiprion_percula
ENSNLEG00000010839	APEX1	99	66.032	ENSATEG00000002883	apex1	97	66.774	Anabas_testudineus
ENSNLEG00000010839	APEX1	100	69.255	ENSACAG00000008099	APEX1	100	69.255	Anolis_carolinensis
ENSNLEG00000010839	APEX1	100	98.113	ENSANAG00000030117	APEX1	100	98.113	Aotus_nancymaae
ENSNLEG00000010839	APEX1	88	71.636	ENSACLG00000018441	apex1	99	65.723	Astatotilapia_calliptera
ENSNLEG00000010839	APEX1	100	65.625	ENSAMXG00000034699	apex1	100	65.312	Astyanax_mexicanus
ENSNLEG00000010839	APEX1	100	93.711	ENSBTAG00000002745	APEX1	100	93.711	Bos_taurus
ENSNLEG00000010839	APEX1	81	45.312	WBGene00001372	exo-3	88	45.312	Caenorhabditis_elegans
ENSNLEG00000010839	APEX1	100	98.113	ENSCJAG00000009726	APEX1	100	98.113	Callithrix_jacchus
ENSNLEG00000010839	APEX1	100	94.969	ENSCAFG00000032033	APEX1	100	94.969	Canis_familiaris
ENSNLEG00000010839	APEX1	54	91.860	ENSCAFG00020023002	-	96	91.860	Canis_lupus_dingo
ENSNLEG00000010839	APEX1	100	94.969	ENSCAFG00020014377	-	100	94.969	Canis_lupus_dingo
ENSNLEG00000010839	APEX1	100	93.082	ENSCHIG00000007298	-	100	93.082	Capra_hircus
ENSNLEG00000010839	APEX1	98	74.679	ENSCHIG00000014537	-	99	74.679	Capra_hircus
ENSNLEG00000010839	APEX1	100	94.969	ENSTSYG00000034813	APEX1	100	94.969	Carlito_syrichta
ENSNLEG00000010839	APEX1	86	88.561	ENSCAPG00000016235	APEX1	91	97.458	Cavia_aperea
ENSNLEG00000010839	APEX1	100	94.340	ENSCPOG00000030909	APEX1	100	94.340	Cavia_porcellus
ENSNLEG00000010839	APEX1	100	98.113	ENSCCAG00000033056	-	100	98.113	Cebus_capucinus
ENSNLEG00000010839	APEX1	100	84.591	ENSCCAG00000031931	-	100	84.591	Cebus_capucinus
ENSNLEG00000010839	APEX1	100	98.428	ENSCATG00000015580	APEX1	100	98.428	Cercocebus_atys
ENSNLEG00000010839	APEX1	100	94.654	ENSCLAG00000001002	APEX1	100	94.654	Chinchilla_lanigera
ENSNLEG00000010839	APEX1	100	98.113	ENSCSAG00000016670	-	100	98.113	Chlorocebus_sabaeus
ENSNLEG00000010839	APEX1	100	98.113	ENSCSAG00000016685	-	100	98.113	Chlorocebus_sabaeus
ENSNLEG00000010839	APEX1	100	72.100	ENSCPBG00000009567	APEX1	100	72.100	Chrysemys_picta_bellii
ENSNLEG00000010839	APEX1	92	54.237	ENSCING00000008137	-	84	57.736	Ciona_intestinalis
ENSNLEG00000010839	APEX1	85	51.698	ENSCSAVG00000007144	-	100	52.490	Ciona_savignyi
ENSNLEG00000010839	APEX1	100	98.428	ENSCANG00000030726	APEX1	100	98.428	Colobus_angolensis_palliatus
ENSNLEG00000010839	APEX1	100	92.767	ENSCGRG00001017046	Apex1	100	92.767	Cricetulus_griseus_chok1gshd
ENSNLEG00000010839	APEX1	100	92.767	ENSCGRG00000008984	Apex1	100	92.767	Cricetulus_griseus_crigri
ENSNLEG00000010839	APEX1	99	65.176	ENSCSEG00000017499	apex1	99	64.780	Cynoglossus_semilaevis
ENSNLEG00000010839	APEX1	89	70.609	ENSCVAG00000022075	apex1	99	65.506	Cyprinodon_variegatus
ENSNLEG00000010839	APEX1	100	66.773	ENSDARG00000045843	apex1	100	66.454	Danio_rerio
ENSNLEG00000010839	APEX1	100	89.937	ENSDNOG00000042234	APEX1	95	89.937	Dasypus_novemcinctus
ENSNLEG00000010839	APEX1	100	94.340	ENSDORG00000001616	Apex1	100	94.340	Dipodomys_ordii
ENSNLEG00000010839	APEX1	100	93.711	ENSETEG00000004855	-	100	93.711	Echinops_telfairi
ENSNLEG00000010839	APEX1	76	64.435	ENSEBUG00000000622	-	92	64.435	Eptatretus_burgeri
ENSNLEG00000010839	APEX1	100	96.226	ENSEASG00005017489	APEX1	74	96.226	Equus_asinus_asinus
ENSNLEG00000010839	APEX1	100	96.226	ENSECAG00000022325	APEX1	82	96.226	Equus_caballus
ENSNLEG00000010839	APEX1	92	93.056	ENSEEUG00000012569	APEX1	100	93.056	Erinaceus_europaeus
ENSNLEG00000010839	APEX1	100	65.204	ENSELUG00000021706	apex1	100	65.625	Esox_lucius
ENSNLEG00000010839	APEX1	100	96.226	ENSFCAG00000030869	APEX1	100	96.226	Felis_catus
ENSNLEG00000010839	APEX1	100	93.396	ENSFDAG00000006120	APEX1	100	93.396	Fukomys_damarensis
ENSNLEG00000010839	APEX1	99	67.089	ENSFHEG00000009031	apex1	83	67.089	Fundulus_heteroclitus
ENSNLEG00000010839	APEX1	99	62.058	ENSGMOG00000007943	apex1	99	61.859	Gadus_morhua
ENSNLEG00000010839	APEX1	99	66.772	ENSGAFG00000005311	apex1	99	66.772	Gambusia_affinis
ENSNLEG00000010839	APEX1	99	65.595	ENSGACG00000019497	apex1	99	68.797	Gasterosteus_aculeatus
ENSNLEG00000010839	APEX1	100	71.473	ENSGAGG00000014999	APEX1	100	71.473	Gopherus_agassizii
ENSNLEG00000010839	APEX1	100	98.742	ENSGGOG00000002128	APEX1	100	98.742	Gorilla_gorilla
ENSNLEG00000010839	APEX1	99	65.823	ENSHBUG00000005894	apex1	99	66.559	Haplochromis_burtoni
ENSNLEG00000010839	APEX1	100	94.340	ENSHGLG00000002848	APEX1	100	94.340	Heterocephalus_glaber_female
ENSNLEG00000010839	APEX1	100	94.340	ENSHGLG00100017878	APEX1	100	94.340	Heterocephalus_glaber_male
ENSNLEG00000010839	APEX1	99	65.595	ENSHCOG00000009961	apex1	99	65.409	Hippocampus_comes
ENSNLEG00000010839	APEX1	100	67.712	ENSIPUG00000005799	apex1	100	67.398	Ictalurus_punctatus
ENSNLEG00000010839	APEX1	100	94.025	ENSSTOG00000010096	APEX1	100	94.025	Ictidomys_tridecemlineatus
ENSNLEG00000010839	APEX1	100	84.277	ENSJJAG00000003660	-	100	84.277	Jaculus_jaculus
ENSNLEG00000010839	APEX1	100	94.025	ENSJJAG00000012067	-	100	94.025	Jaculus_jaculus
ENSNLEG00000010839	APEX1	100	81.789	ENSJJAG00000020465	-	100	81.789	Jaculus_jaculus
ENSNLEG00000010839	APEX1	89	70.968	ENSKMAG00000021171	apex1	99	65.823	Kryptolebias_marmoratus
ENSNLEG00000010839	APEX1	89	68.100	ENSLBEG00000010248	apex1	99	63.898	Labrus_bergylta
ENSNLEG00000010839	APEX1	100	66.984	ENSLACG00000008617	APEX1	100	66.984	Latimeria_chalumnae
ENSNLEG00000010839	APEX1	100	65.839	ENSLOCG00000015516	apex1	99	65.732	Lepisosteus_oculatus
ENSNLEG00000010839	APEX1	100	94.025	ENSLAFG00000021872	APEX1	100	94.025	Loxodonta_africana
ENSNLEG00000010839	APEX1	100	97.799	ENSMFAG00000002565	APEX1	100	97.799	Macaca_fascicularis
ENSNLEG00000010839	APEX1	100	98.113	ENSMMUG00000048039	APEX1	100	98.113	Macaca_mulatta
ENSNLEG00000010839	APEX1	100	98.113	ENSMNEG00000036944	APEX1	100	98.113	Macaca_nemestrina
ENSNLEG00000010839	APEX1	100	98.428	ENSMLEG00000042125	APEX1	100	98.428	Mandrillus_leucophaeus
ENSNLEG00000010839	APEX1	89	70.968	ENSMAMG00000023526	apex1	99	66.139	Mastacembelus_armatus
ENSNLEG00000010839	APEX1	88	71.636	ENSMZEG00005014187	apex1	99	65.723	Maylandia_zebra
ENSNLEG00000010839	APEX1	100	93.711	ENSMAUG00000013994	Apex1	100	93.711	Mesocricetus_auratus
ENSNLEG00000010839	APEX1	100	95.912	ENSMICG00000043554	APEX1	100	95.912	Microcebus_murinus
ENSNLEG00000010839	APEX1	100	92.138	ENSMOCG00000013721	Apex1	100	92.138	Microtus_ochrogaster
ENSNLEG00000010839	APEX1	89	67.143	ENSMMOG00000010031	apex1	87	67.143	Mola_mola
ENSNLEG00000010839	APEX1	100	83.438	ENSMODG00000007125	APEX1	100	83.540	Monodelphis_domestica
ENSNLEG00000010839	APEX1	89	63.799	ENSMALG00000011699	apex1	75	63.799	Monopterus_albus
ENSNLEG00000010839	APEX1	99	94.322	MGP_CAROLIEiJ_G0019209	Apex1	99	94.322	Mus_caroli
ENSNLEG00000010839	APEX1	100	94.969	ENSMUSG00000035960	Apex1	100	94.969	Mus_musculus
ENSNLEG00000010839	APEX1	100	94.969	MGP_PahariEiJ_G0030232	Apex1	100	94.969	Mus_pahari
ENSNLEG00000010839	APEX1	100	94.969	MGP_SPRETEiJ_G0020101	Apex1	100	94.969	Mus_spretus
ENSNLEG00000010839	APEX1	100	94.062	ENSMLUG00000028957	APEX1	100	94.062	Myotis_lucifugus
ENSNLEG00000010839	APEX1	100	93.396	ENSNGAG00000002725	-	100	93.396	Nannospalax_galili
ENSNLEG00000010839	APEX1	100	70.126	ENSNGAG00000021748	-	99	70.126	Nannospalax_galili
ENSNLEG00000010839	APEX1	88	71.273	ENSNBRG00000005334	apex1	91	65.409	Neolamprologus_brichardi
ENSNLEG00000010839	APEX1	100	86.478	ENSMEUG00000014519	APEX1	100	86.120	Notamacropus_eugenii
ENSNLEG00000010839	APEX1	100	93.396	ENSOPRG00000014029	APEX1	100	93.082	Ochotona_princeps
ENSNLEG00000010839	APEX1	100	71.914	ENSODEG00000006583	-	100	71.914	Octodon_degus
ENSNLEG00000010839	APEX1	97	75.081	ENSODEG00000004777	-	99	75.081	Octodon_degus
ENSNLEG00000010839	APEX1	100	94.654	ENSODEG00000001703	-	100	94.654	Octodon_degus
ENSNLEG00000010839	APEX1	89	71.583	ENSONIG00000012089	apex1	99	66.038	Oreochromis_niloticus
ENSNLEG00000010839	APEX1	91	81.754	ENSOANG00000008836	APEX1	80	76.543	Ornithorhynchus_anatinus
ENSNLEG00000010839	APEX1	100	95.283	ENSOCUG00000005022	APEX1	100	95.283	Oryctolagus_cuniculus
ENSNLEG00000010839	APEX1	99	66.559	ENSORLG00000012378	apex1	99	66.559	Oryzias_latipes
ENSNLEG00000010839	APEX1	99	66.559	ENSORLG00020021371	apex1	99	66.559	Oryzias_latipes_hni
ENSNLEG00000010839	APEX1	99	66.559	ENSORLG00015020089	apex1	99	66.559	Oryzias_latipes_hsok
ENSNLEG00000010839	APEX1	99	66.352	ENSOMEG00000018876	apex1	99	66.352	Oryzias_melastigma
ENSNLEG00000010839	APEX1	98	83.974	ENSOGAG00000029355	-	100	83.974	Otolemur_garnettii
ENSNLEG00000010839	APEX1	100	94.654	ENSOGAG00000013335	-	100	94.654	Otolemur_garnettii
ENSNLEG00000010839	APEX1	100	92.138	ENSOARG00000019740	-	100	92.138	Ovis_aries
ENSNLEG00000010839	APEX1	97	89.286	ENSOARG00000001876	-	100	89.286	Ovis_aries
ENSNLEG00000010839	APEX1	99	78.165	ENSOARG00000014424	-	100	78.165	Ovis_aries
ENSNLEG00000010839	APEX1	100	99.042	ENSPPAG00000038760	APEX1	100	99.042	Pan_paniscus
ENSNLEG00000010839	APEX1	100	96.541	ENSPPRG00000011794	APEX1	100	96.541	Panthera_pardus
ENSNLEG00000010839	APEX1	100	96.226	ENSPTIG00000014829	APEX1	100	96.226	Panthera_tigris_altaica
ENSNLEG00000010839	APEX1	100	99.042	ENSPTRG00000006093	APEX1	100	99.042	Pan_troglodytes
ENSNLEG00000010839	APEX1	100	98.428	ENSPANG00000022757	APEX1	100	98.428	Papio_anubis
ENSNLEG00000010839	APEX1	88	68.231	ENSPKIG00000003504	apex1	100	64.174	Paramormyrops_kingsleyae
ENSNLEG00000010839	APEX1	77	66.255	ENSPMGG00000016596	apex1	73	66.255	Periophthalmus_magnuspinnatus
ENSNLEG00000010839	APEX1	100	94.340	ENSPEMG00000019097	Apex1	100	94.340	Peromyscus_maniculatus_bairdii
ENSNLEG00000010839	APEX1	96	65.333	ENSPMAG00000007275	-	95	68.327	Petromyzon_marinus
ENSNLEG00000010839	APEX1	100	83.699	ENSPCIG00000023274	APEX1	100	84.112	Phascolarctos_cinereus
ENSNLEG00000010839	APEX1	99	66.772	ENSPFOG00000004178	apex1	99	66.772	Poecilia_formosa
ENSNLEG00000010839	APEX1	99	66.456	ENSPLAG00000012779	apex1	99	66.456	Poecilia_latipinna
ENSNLEG00000010839	APEX1	99	66.772	ENSPMEG00000019623	apex1	99	66.772	Poecilia_mexicana
ENSNLEG00000010839	APEX1	99	66.139	ENSPREG00000014298	apex1	99	66.139	Poecilia_reticulata
ENSNLEG00000010839	APEX1	100	98.113	ENSPPYG00000005565	APEX1	100	98.113	Pongo_abelii
ENSNLEG00000010839	APEX1	100	92.453	ENSPCAG00000010376	APEX1	100	92.453	Procavia_capensis
ENSNLEG00000010839	APEX1	100	95.912	ENSPCOG00000021564	APEX1	100	95.912	Propithecus_coquereli
ENSNLEG00000010839	APEX1	100	95.312	ENSPVAG00000010736	APEX1	100	95.312	Pteropus_vampyrus
ENSNLEG00000010839	APEX1	88	71.636	ENSPNYG00000023940	apex1	99	65.723	Pundamilia_nyererei
ENSNLEG00000010839	APEX1	93	65.203	ENSPNAG00000020897	apex1	96	65.085	Pygocentrus_nattereri
ENSNLEG00000010839	APEX1	100	94.025	ENSRNOG00000009663	Apex1	100	94.025	Rattus_norvegicus
ENSNLEG00000010839	APEX1	100	98.428	ENSRBIG00000038325	APEX1	99	98.428	Rhinopithecus_bieti
ENSNLEG00000010839	APEX1	100	97.799	ENSSBOG00000018921	-	100	97.799	Saimiri_boliviensis_boliviensis
ENSNLEG00000010839	APEX1	100	84.026	ENSSBOG00000031372	-	100	84.026	Saimiri_boliviensis_boliviensis
ENSNLEG00000010839	APEX1	100	83.025	ENSSHAG00000013524	APEX1	100	83.025	Sarcophilus_harrisii
ENSNLEG00000010839	APEX1	88	66.426	ENSSFOG00015001948	apex1	100	61.981	Scleropages_formosus
ENSNLEG00000010839	APEX1	89	69.065	ENSSMAG00000013348	apex1	99	64.984	Scophthalmus_maximus
ENSNLEG00000010839	APEX1	99	64.873	ENSSDUG00000016377	apex1	99	65.916	Seriola_dumerili
ENSNLEG00000010839	APEX1	99	65.506	ENSSLDG00000023005	apex1	99	66.559	Seriola_lalandi_dorsalis
ENSNLEG00000010839	APEX1	91	72.887	ENSSPUG00000000531	APEX1	96	72.887	Sphenodon_punctatus
ENSNLEG00000010839	APEX1	99	64.557	ENSSPAG00000000458	apex1	99	64.557	Stegastes_partitus
ENSNLEG00000010839	APEX1	100	94.340	ENSSSCG00000040060	-	100	94.340	Sus_scrofa
ENSNLEG00000010839	APEX1	96	56.129	ENSSSCG00000039705	-	96	56.129	Sus_scrofa
ENSNLEG00000010839	APEX1	75	60.169	ENSTGUG00000014378	APEX1	100	60.169	Taeniopygia_guttata
ENSNLEG00000010839	APEX1	89	67.626	ENSTRUG00000004268	apex1	84	67.742	Takifugu_rubripes
ENSNLEG00000010839	APEX1	99	63.987	ENSTNIG00000005778	apex1	99	63.987	Tetraodon_nigroviridis
ENSNLEG00000010839	APEX1	100	91.824	ENSTBEG00000006405	APEX1	100	91.824	Tupaia_belangeri
ENSNLEG00000010839	APEX1	75	95.339	ENSTTRG00000007860	APEX1	100	95.339	Tursiops_truncatus
ENSNLEG00000010839	APEX1	100	95.283	ENSUAMG00000010457	APEX1	100	95.283	Ursus_americanus
ENSNLEG00000010839	APEX1	100	95.283	ENSUMAG00000009178	APEX1	100	95.283	Ursus_maritimus
ENSNLEG00000010839	APEX1	75	90.254	ENSVPAG00000005083	APEX1	100	90.254	Vicugna_pacos
ENSNLEG00000010839	APEX1	100	94.969	ENSVVUG00000009010	APEX1	100	94.969	Vulpes_vulpes
ENSNLEG00000010839	APEX1	100	66.254	ENSXETG00000024773	apex1	100	66.254	Xenopus_tropicalis
ENSNLEG00000010839	APEX1	89	71.326	ENSXCOG00000015233	apex1	99	66.456	Xiphophorus_couchianus
ENSNLEG00000010839	APEX1	100	67.412	ENSXMAG00000006195	apex1	99	66.456	Xiphophorus_maculatus