EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000010955 (Gene tree)
Gene ID: 100595674
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 64036 bases
Position: chr17:26850723-26914758
Accession: 100595674
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000013559	Rif1_N	PF12231.8	3e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000014232	RIF1-201	7344	XM_012496511	ENSNLEP00000013559	2447 (aa)	XP_012351965	G1RK02

Gene Model

Click here to download ENSNLEG00000010955's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000010955's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000010955	RIF1	100	95.726	ENSG00000080345	RIF1	100	95.726	Homo_sapiens
ENSNLEG00000010955	RIF1	99	78.683	ENSAMEG00000008461	RIF1	100	78.643	Ailuropoda_melanoleuca
ENSNLEG00000010955	RIF1	63	49.574	ENSACIG00000017765	rif1	69	49.651	Amphilophus_citrinellus
ENSNLEG00000010955	RIF1	66	46.943	ENSAOCG00000017231	rif1	66	46.792	Amphiprion_ocellaris
ENSNLEG00000010955	RIF1	70	53.763	ENSAPEG00000013228	rif1	65	53.763	Amphiprion_percula
ENSNLEG00000010955	RIF1	65	47.713	ENSATEG00000022887	rif1	68	47.586	Anabas_testudineus
ENSNLEG00000010955	RIF1	84	58.284	ENSAPLG00000007092	RIF1	92	58.284	Anas_platyrhynchos
ENSNLEG00000010955	RIF1	85	50.735	ENSACAG00000003714	RIF1	93	50.188	Anolis_carolinensis
ENSNLEG00000010955	RIF1	100	89.910	ENSANAG00000024840	RIF1	100	89.788	Aotus_nancymaae
ENSNLEG00000010955	RIF1	60	46.909	ENSAMXG00000010910	rif1	52	50.576	Astyanax_mexicanus
ENSNLEG00000010955	RIF1	93	78.618	ENSBTAG00000021020	RIF1	99	78.618	Bos_taurus
ENSNLEG00000010955	RIF1	100	89.345	ENSCJAG00000003138	RIF1	100	89.223	Callithrix_jacchus
ENSNLEG00000010955	RIF1	100	77.253	ENSCAFG00000005670	RIF1	97	76.932	Canis_familiaris
ENSNLEG00000010955	RIF1	100	76.615	ENSCAFG00020016401	RIF1	100	76.294	Canis_lupus_dingo
ENSNLEG00000010955	RIF1	100	78.256	ENSCHIG00000020327	RIF1	100	78.256	Capra_hircus
ENSNLEG00000010955	RIF1	99	79.099	ENSTSYG00000008861	RIF1	100	79.099	Carlito_syrichta
ENSNLEG00000010955	RIF1	80	83.721	ENSCAPG00000008957	RIF1	96	83.721	Cavia_aperea
ENSNLEG00000010955	RIF1	99	69.551	ENSCPOG00000037898	RIF1	99	69.379	Cavia_porcellus
ENSNLEG00000010955	RIF1	100	88.771	ENSCCAG00000024760	RIF1	100	88.609	Cebus_capucinus
ENSNLEG00000010955	RIF1	100	94.463	ENSCATG00000033353	RIF1	100	94.340	Cercocebus_atys
ENSNLEG00000010955	RIF1	96	73.963	ENSCLAG00000001517	RIF1	99	73.740	Chinchilla_lanigera
ENSNLEG00000010955	RIF1	100	93.312	ENSCSAG00000016089	RIF1	100	93.191	Chlorocebus_sabaeus
ENSNLEG00000010955	RIF1	97	73.054	ENSCHOG00000007187	RIF1	97	73.054	Choloepus_hoffmanni
ENSNLEG00000010955	RIF1	87	69.453	ENSCPBG00000025885	RIF1	95	70.740	Chrysemys_picta_bellii
ENSNLEG00000010955	RIF1	100	92.633	ENSCANG00000028962	RIF1	100	93.053	Colobus_angolensis_palliatus
ENSNLEG00000010955	RIF1	99	68.788	ENSCGRG00001024589	Rif1	100	68.655	Cricetulus_griseus_chok1gshd
ENSNLEG00000010955	RIF1	98	70.228	ENSCGRG00000010713	Rif1	100	70.269	Cricetulus_griseus_crigri
ENSNLEG00000010955	RIF1	61	53.636	ENSCSEG00000003945	rif1	65	53.636	Cynoglossus_semilaevis
ENSNLEG00000010955	RIF1	63	48.031	ENSCVAG00000022479	rif1	67	48.031	Cyprinodon_variegatus
ENSNLEG00000010955	RIF1	99	75.453	ENSDNOG00000011194	RIF1	97	75.453	Dasypus_novemcinctus
ENSNLEG00000010955	RIF1	94	71.396	ENSETEG00000012421	RIF1	92	71.150	Echinops_telfairi
ENSNLEG00000010955	RIF1	95	91.419	ENSEASG00005023434	RIF1	99	91.419	Equus_asinus_asinus
ENSNLEG00000010955	RIF1	96	88.262	ENSECAG00000012679	RIF1	100	88.262	Equus_caballus
ENSNLEG00000010955	RIF1	62	50.079	ENSELUG00000006826	rif1	56	49.922	Esox_lucius
ENSNLEG00000010955	RIF1	100	78.745	ENSFCAG00000029742	RIF1	100	78.785	Felis_catus
ENSNLEG00000010955	RIF1	77	58.544	ENSFALG00000013874	RIF1	91	58.544	Ficedula_albicollis
ENSNLEG00000010955	RIF1	99	73.765	ENSFDAG00000006538	RIF1	99	73.724	Fukomys_damarensis
ENSNLEG00000010955	RIF1	62	49.562	ENSFHEG00000013721	rif1	65	49.606	Fundulus_heteroclitus
ENSNLEG00000010955	RIF1	53	52.747	ENSGMOG00000003517	rif1	80	52.747	Gadus_morhua
ENSNLEG00000010955	RIF1	78	63.816	ENSGALG00000012484	RIF1	91	63.816	Gallus_gallus
ENSNLEG00000010955	RIF1	59	53.368	ENSGAFG00000017196	rif1	66	53.190	Gambusia_affinis
ENSNLEG00000010955	RIF1	58	52.500	ENSGACG00000008579	rif1	66	52.033	Gasterosteus_aculeatus
ENSNLEG00000010955	RIF1	88	63.964	ENSGAGG00000012595	RIF1	94	69.492	Gopherus_agassizii
ENSNLEG00000010955	RIF1	90	96.897	ENSGGOG00000040178	RIF1	96	96.897	Gorilla_gorilla
ENSNLEG00000010955	RIF1	65	49.115	ENSHBUG00000007125	rif1	70	48.895	Haplochromis_burtoni
ENSNLEG00000010955	RIF1	95	73.749	ENSHGLG00100009807	RIF1	99	73.664	Heterocephalus_glaber_male
ENSNLEG00000010955	RIF1	63	47.956	ENSHCOG00000015943	rif1	60	47.840	Hippocampus_comes
ENSNLEG00000010955	RIF1	100	76.018	ENSSTOG00000020712	RIF1	100	75.868	Ictidomys_tridecemlineatus
ENSNLEG00000010955	RIF1	99	68.100	ENSJJAG00000023000	Rif1	100	67.939	Jaculus_jaculus
ENSNLEG00000010955	RIF1	52	49.024	ENSKMAG00000002852	rif1	53	49.024	Kryptolebias_marmoratus
ENSNLEG00000010955	RIF1	60	51.639	ENSLBEG00000023196	rif1	57	51.639	Labrus_bergylta
ENSNLEG00000010955	RIF1	90	56.757	ENSLACG00000005425	RIF1	91	57.658	Latimeria_chalumnae
ENSNLEG00000010955	RIF1	63	53.557	ENSLOCG00000002657	rif1	84	47.013	Lepisosteus_oculatus
ENSNLEG00000010955	RIF1	99	76.154	ENSLAFG00000009796	RIF1	100	76.124	Loxodonta_africana
ENSNLEG00000010955	RIF1	100	94.463	ENSMFAG00000032233	RIF1	100	94.340	Macaca_fascicularis
ENSNLEG00000010955	RIF1	100	93.433	ENSMMUG00000008611	RIF1	100	93.312	Macaca_mulatta
ENSNLEG00000010955	RIF1	100	94.381	ENSMNEG00000031616	RIF1	100	94.259	Macaca_nemestrina
ENSNLEG00000010955	RIF1	100	94.585	ENSMLEG00000042945	RIF1	100	94.463	Mandrillus_leucophaeus
ENSNLEG00000010955	RIF1	75	47.249	ENSMAMG00000001745	rif1	65	48.116	Mastacembelus_armatus
ENSNLEG00000010955	RIF1	66	49.102	ENSMZEG00005020920	rif1	72	48.882	Maylandia_zebra
ENSNLEG00000010955	RIF1	83	55.280	ENSMGAG00000012732	RIF1	91	55.280	Meleagris_gallopavo
ENSNLEG00000010955	RIF1	94	87.027	ENSMAUG00000013158	Rif1	99	87.027	Mesocricetus_auratus
ENSNLEG00000010955	RIF1	100	83.658	ENSMICG00000046127	RIF1	100	83.489	Microcebus_murinus
ENSNLEG00000010955	RIF1	99	68.474	ENSMOCG00000009381	Rif1	100	68.257	Microtus_ochrogaster
ENSNLEG00000010955	RIF1	51	48.655	ENSMMOG00000006519	rif1	51	48.580	Mola_mola
ENSNLEG00000010955	RIF1	100	58.197	ENSMODG00000003703	RIF1	100	58.088	Monodelphis_domestica
ENSNLEG00000010955	RIF1	62	48.528	ENSMALG00000016759	rif1	76	48.521	Monopterus_albus
ENSNLEG00000010955	RIF1	99	67.671	MGP_CAROLIEiJ_G0023555	Rif1	100	67.751	Mus_caroli
ENSNLEG00000010955	RIF1	99	68.333	ENSMUSG00000036202	Rif1	100	68.413	Mus_musculus
ENSNLEG00000010955	RIF1	99	66.546	MGP_PahariEiJ_G0025006	Rif1	100	66.506	Mus_pahari
ENSNLEG00000010955	RIF1	99	68.054	MGP_SPRETEiJ_G0024476	Rif1	100	68.054	Mus_spretus
ENSNLEG00000010955	RIF1	100	78.116	ENSMPUG00000000371	RIF1	100	78.116	Mustela_putorius_furo
ENSNLEG00000010955	RIF1	89	75.896	ENSMLUG00000003376	RIF1	100	75.896	Myotis_lucifugus
ENSNLEG00000010955	RIF1	100	71.669	ENSNGAG00000009268	Rif1	100	71.365	Nannospalax_galili
ENSNLEG00000010955	RIF1	62	49.880	ENSNBRG00000014257	rif1	72	48.000	Neolamprologus_brichardi
ENSNLEG00000010955	RIF1	75	78.667	ENSMEUG00000007601	-	82	78.667	Notamacropus_eugenii
ENSNLEG00000010955	RIF1	99	70.425	ENSODEG00000003950	RIF1	99	70.586	Octodon_degus
ENSNLEG00000010955	RIF1	83	59.051	ENSOANG00000006078	-	86	59.183	Ornithorhynchus_anatinus
ENSNLEG00000010955	RIF1	100	75.000	ENSOCUG00000017435	RIF1	100	74.819	Oryctolagus_cuniculus
ENSNLEG00000010955	RIF1	62	47.248	ENSORLG00020001302	rif1	67	47.785	Oryzias_latipes_hni
ENSNLEG00000010955	RIF1	64	47.484	ENSORLG00015000009	rif1	69	47.563	Oryzias_latipes_hsok
ENSNLEG00000010955	RIF1	62	48.183	ENSOMEG00000021513	rif1	66	48.022	Oryzias_melastigma
ENSNLEG00000010955	RIF1	99	79.687	ENSOGAG00000006141	RIF1	99	79.607	Otolemur_garnettii
ENSNLEG00000010955	RIF1	100	77.488	ENSOARG00000008930	RIF1	100	77.488	Ovis_aries
ENSNLEG00000010955	RIF1	100	95.525	ENSPPAG00000023754	RIF1	100	95.525	Pan_paniscus
ENSNLEG00000010955	RIF1	100	78.713	ENSPPRG00000003618	RIF1	100	78.794	Panthera_pardus
ENSNLEG00000010955	RIF1	100	77.974	ENSPTIG00000020652	RIF1	100	78.014	Panthera_tigris_altaica
ENSNLEG00000010955	RIF1	100	95.606	ENSPTRG00000012534	RIF1	100	95.606	Pan_troglodytes
ENSNLEG00000010955	RIF1	100	94.178	ENSPANG00000008525	RIF1	100	94.055	Papio_anubis
ENSNLEG00000010955	RIF1	65	45.669	ENSPMGG00000016141	rif1	79	44.488	Periophthalmus_magnuspinnatus
ENSNLEG00000010955	RIF1	98	70.641	ENSPEMG00000000446	Rif1	99	70.456	Peromyscus_maniculatus_bairdii
ENSNLEG00000010955	RIF1	62	50.991	ENSPFOG00000017804	rif1	68	50.833	Poecilia_formosa
ENSNLEG00000010955	RIF1	56	51.518	ENSPFOG00000000554	-	66	51.334	Poecilia_formosa
ENSNLEG00000010955	RIF1	64	50.799	ENSPLAG00000017945	rif1	71	51.081	Poecilia_latipinna
ENSNLEG00000010955	RIF1	52	49.951	ENSPMEG00000006897	-	65	49.755	Poecilia_mexicana
ENSNLEG00000010955	RIF1	64	50.117	ENSPREG00000018052	rif1	65	53.597	Poecilia_reticulata
ENSNLEG00000010955	RIF1	100	95.046	ENSPPYG00000012846	RIF1	100	95.046	Pongo_abelii
ENSNLEG00000010955	RIF1	78	87.129	ENSPCAG00000009032	RIF1	79	87.129	Procavia_capensis
ENSNLEG00000010955	RIF1	100	83.813	ENSPCOG00000027888	RIF1	100	83.813	Propithecus_coquereli
ENSNLEG00000010955	RIF1	93	85.885	ENSPVAG00000014276	RIF1	95	85.885	Pteropus_vampyrus
ENSNLEG00000010955	RIF1	63	48.817	ENSPNYG00000012940	rif1	68	48.583	Pundamilia_nyererei
ENSNLEG00000010955	RIF1	63	51.379	ENSPNAG00000016685	rif1	65	51.202	Pygocentrus_nattereri
ENSNLEG00000010955	RIF1	99	66.800	ENSRNOG00000054901	Rif1	100	66.747	Rattus_norvegicus
ENSNLEG00000010955	RIF1	100	93.607	ENSRBIG00000003704	RIF1	100	93.607	Rhinopithecus_bieti
ENSNLEG00000010955	RIF1	100	95.236	ENSRROG00000028206	RIF1	100	95.236	Rhinopithecus_roxellana
ENSNLEG00000010955	RIF1	97	89.439	ENSSBOG00000029530	RIF1	100	89.308	Saimiri_boliviensis_boliviensis
ENSNLEG00000010955	RIF1	99	58.006	ENSSHAG00000018552	RIF1	100	57.173	Sarcophilus_harrisii
ENSNLEG00000010955	RIF1	67	52.438	ENSSFOG00015021539	rif1	75	52.278	Scleropages_formosus
ENSNLEG00000010955	RIF1	51	49.029	ENSSMAG00000011704	rif1	51	47.829	Scophthalmus_maximus
ENSNLEG00000010955	RIF1	73	45.152	ENSSDUG00000015632	rif1	71	47.842	Seriola_dumerili
ENSNLEG00000010955	RIF1	62	49.370	ENSSLDG00000019531	rif1	53	47.619	Seriola_lalandi_dorsalis
ENSNLEG00000010955	RIF1	62	80.000	ENSSARG00000007161	-	64	80.000	Sorex_araneus
ENSNLEG00000010955	RIF1	89	69.481	ENSSPUG00000003062	RIF1	97	56.025	Sphenodon_punctatus
ENSNLEG00000010955	RIF1	50	55.912	ENSSPAG00000018359	rif1	76	55.912	Stegastes_partitus
ENSNLEG00000010955	RIF1	100	79.011	ENSSSCG00000016395	RIF1	100	78.566	Sus_scrofa
ENSNLEG00000010955	RIF1	63	48.819	ENSTRUG00000015808	rif1	69	48.212	Takifugu_rubripes
ENSNLEG00000010955	RIF1	67	47.290	ENSTNIG00000011538	rif1	77	47.290	Tetraodon_nigroviridis
ENSNLEG00000010955	RIF1	83	86.076	ENSTBEG00000016082	RIF1	81	86.076	Tupaia_belangeri
ENSNLEG00000010955	RIF1	100	78.700	ENSTTRG00000011190	RIF1	100	78.700	Tursiops_truncatus
ENSNLEG00000010955	RIF1	86	89.258	ENSUAMG00000026385	RIF1	97	89.258	Ursus_americanus
ENSNLEG00000010955	RIF1	96	87.404	ENSUMAG00000000337	RIF1	99	87.404	Ursus_maritimus
ENSNLEG00000010955	RIF1	100	76.685	ENSVPAG00000002162	RIF1	100	76.414	Vicugna_pacos
ENSNLEG00000010955	RIF1	100	76.584	ENSVVUG00000011293	RIF1	100	76.383	Vulpes_vulpes
ENSNLEG00000010955	RIF1	99	42.779	ENSXETG00000004530	rif1	99	42.344	Xenopus_tropicalis
ENSNLEG00000010955	RIF1	65	47.799	ENSXMAG00000000506	rif1	66	47.920	Xiphophorus_maculatus