EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000011282 (Gene tree)
Gene ID: 100586640
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 20562 bases
Position: chr3:147621908-147642469
Accession: 100586640
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000013740	CAF1	PF04857.20	1.9e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000014418	PNLDC1-201	1935	XM_003271763	ENSNLEP00000013740	520 (aa)	XP_003271811	G1RKI3

Gene Model

Click here to download ENSNLEG00000011282's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000011282's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000011282	PNLDC1	99	96.532	ENSG00000146453	PNLDC1	99	96.532	Homo_sapiens
ENSNLEG00000011282	PNLDC1	97	86.535	ENSAMEG00000015371	PNLDC1	95	86.535	Ailuropoda_melanoleuca
ENSNLEG00000011282	PNLDC1	99	58.046	ENSAPLG00000007014	PNLDC1	99	58.046	Anas_platyrhynchos
ENSNLEG00000011282	PNLDC1	97	59.566	ENSACAG00000013667	PNLDC1	95	59.566	Anolis_carolinensis
ENSNLEG00000011282	PNLDC1	98	91.716	ENSANAG00000034713	PNLDC1	95	91.716	Aotus_nancymaae
ENSNLEG00000011282	PNLDC1	98	86.785	ENSBTAG00000015166	PNLDC1	97	86.888	Bos_taurus
ENSNLEG00000011282	PNLDC1	98	92.110	ENSCJAG00000011865	PNLDC1	99	92.277	Callithrix_jacchus
ENSNLEG00000011282	PNLDC1	99	86.047	ENSCAFG00000000740	PNLDC1	97	86.047	Canis_familiaris
ENSNLEG00000011282	PNLDC1	99	83.977	ENSCAFG00020017742	PNLDC1	97	83.977	Canis_lupus_dingo
ENSNLEG00000011282	PNLDC1	99	83.721	ENSCHIG00000003141	PNLDC1	99	82.375	Capra_hircus
ENSNLEG00000011282	PNLDC1	98	89.546	ENSTSYG00000005606	PNLDC1	95	89.546	Carlito_syrichta
ENSNLEG00000011282	PNLDC1	89	65.227	ENSCAPG00000011893	PNLDC1	89	65.227	Cavia_aperea
ENSNLEG00000011282	PNLDC1	99	79.377	ENSCPOG00000019565	PNLDC1	97	79.377	Cavia_porcellus
ENSNLEG00000011282	PNLDC1	98	92.899	ENSCCAG00000026232	PNLDC1	95	92.899	Cebus_capucinus
ENSNLEG00000011282	PNLDC1	98	94.477	ENSCATG00000033196	PNLDC1	95	94.477	Cercocebus_atys
ENSNLEG00000011282	PNLDC1	97	83.399	ENSCLAG00000003228	PNLDC1	95	83.399	Chinchilla_lanigera
ENSNLEG00000011282	PNLDC1	100	94.444	ENSCSAG00000012478	PNLDC1	100	94.444	Chlorocebus_sabaeus
ENSNLEG00000011282	PNLDC1	95	65.392	ENSCPBG00000004050	PNLDC1	97	65.331	Chrysemys_picta_bellii
ENSNLEG00000011282	PNLDC1	100	94.423	ENSCANG00000043076	PNLDC1	100	94.423	Colobus_angolensis_palliatus
ENSNLEG00000011282	PNLDC1	98	81.460	ENSCGRG00001007470	-	95	81.460	Cricetulus_griseus_chok1gshd
ENSNLEG00000011282	PNLDC1	98	64.892	ENSCGRG00001011981	-	94	64.892	Cricetulus_griseus_chok1gshd
ENSNLEG00000011282	PNLDC1	98	67.061	ENSCGRG00000003103	-	94	67.061	Cricetulus_griseus_crigri
ENSNLEG00000011282	PNLDC1	98	81.460	ENSCGRG00000010221	-	95	81.460	Cricetulus_griseus_crigri
ENSNLEG00000011282	PNLDC1	99	84.526	ENSDNOG00000013709	PNLDC1	97	84.526	Dasypus_novemcinctus
ENSNLEG00000011282	PNLDC1	99	78.420	ENSDORG00000011517	Pnldc1	95	85.906	Dipodomys_ordii
ENSNLEG00000011282	PNLDC1	94	75.460	ENSETEG00000007587	PNLDC1	99	75.460	Echinops_telfairi
ENSNLEG00000011282	PNLDC1	96	30.116	ENSEBUG00000008118	PNLDC1	94	30.116	Eptatretus_burgeri
ENSNLEG00000011282	PNLDC1	99	79.231	ENSEASG00005019029	PNLDC1	97	79.231	Equus_asinus_asinus
ENSNLEG00000011282	PNLDC1	99	86.628	ENSECAG00000012898	PNLDC1	97	86.628	Equus_caballus
ENSNLEG00000011282	PNLDC1	69	78.125	ENSEEUG00000005717	-	86	78.125	Erinaceus_europaeus
ENSNLEG00000011282	PNLDC1	99	86.047	ENSFCAG00000002848	PNLDC1	97	86.047	Felis_catus
ENSNLEG00000011282	PNLDC1	96	57.654	ENSFALG00000012081	PNLDC1	99	57.654	Ficedula_albicollis
ENSNLEG00000011282	PNLDC1	98	83.432	ENSFDAG00000021334	PNLDC1	95	83.432	Fukomys_damarensis
ENSNLEG00000011282	PNLDC1	78	58.824	ENSGALG00000011624	PNLDC1	79	58.824	Gallus_gallus
ENSNLEG00000011282	PNLDC1	97	66.733	ENSGAGG00000015276	PNLDC1	100	66.736	Gopherus_agassizii
ENSNLEG00000011282	PNLDC1	98	96.844	ENSGGOG00000014077	PNLDC1	95	96.844	Gorilla_gorilla
ENSNLEG00000011282	PNLDC1	98	84.418	ENSHGLG00000006889	PNLDC1	95	84.418	Heterocephalus_glaber_female
ENSNLEG00000011282	PNLDC1	98	84.418	ENSHGLG00100018275	PNLDC1	95	84.418	Heterocephalus_glaber_male
ENSNLEG00000011282	PNLDC1	97	88.119	ENSSTOG00000005595	PNLDC1	95	88.119	Ictidomys_tridecemlineatus
ENSNLEG00000011282	PNLDC1	99	78.488	ENSJJAG00000009937	Pnldc1	97	78.488	Jaculus_jaculus
ENSNLEG00000011282	PNLDC1	56	85.223	ENSLAFG00000030189	PNLDC1	88	83.667	Loxodonta_africana
ENSNLEG00000011282	PNLDC1	98	95.069	ENSMFAG00000041296	PNLDC1	95	95.069	Macaca_fascicularis
ENSNLEG00000011282	PNLDC1	100	93.371	ENSMMUG00000004181	PNLDC1	100	93.371	Macaca_mulatta
ENSNLEG00000011282	PNLDC1	98	95.069	ENSMNEG00000034271	PNLDC1	95	95.069	Macaca_nemestrina
ENSNLEG00000011282	PNLDC1	98	91.321	ENSMLEG00000044059	PNLDC1	95	91.321	Mandrillus_leucophaeus
ENSNLEG00000011282	PNLDC1	98	58.743	ENSMGAG00000012470	PNLDC1	97	58.743	Meleagris_gallopavo
ENSNLEG00000011282	PNLDC1	97	65.551	ENSMAUG00000012298	Pnldc1	95	65.551	Mesocricetus_auratus
ENSNLEG00000011282	PNLDC1	99	86.628	ENSMICG00000008021	PNLDC1	97	86.628	Microcebus_murinus
ENSNLEG00000011282	PNLDC1	99	83.398	ENSMOCG00000014287	Pnldc1	97	83.398	Microtus_ochrogaster
ENSNLEG00000011282	PNLDC1	97	75.542	ENSMODG00000007420	PNLDC1	94	75.542	Monodelphis_domestica
ENSNLEG00000011282	PNLDC1	99	83.527	MGP_CAROLIEiJ_G0021045	Pnldc1	97	83.527	Mus_caroli
ENSNLEG00000011282	PNLDC1	99	83.527	ENSMUSG00000073460	Pnldc1	95	85.667	Mus_musculus
ENSNLEG00000011282	PNLDC1	99	84.109	MGP_PahariEiJ_G0023361	Pnldc1	97	84.109	Mus_pahari
ENSNLEG00000011282	PNLDC1	99	83.333	MGP_SPRETEiJ_G0021975	Pnldc1	97	83.333	Mus_spretus
ENSNLEG00000011282	PNLDC1	99	84.660	ENSMPUG00000004920	PNLDC1	97	84.660	Mustela_putorius_furo
ENSNLEG00000011282	PNLDC1	97	85.771	ENSMLUG00000000747	PNLDC1	95	85.771	Myotis_lucifugus
ENSNLEG00000011282	PNLDC1	99	85.078	ENSNGAG00000017714	Pnldc1	97	85.078	Nannospalax_galili
ENSNLEG00000011282	PNLDC1	62	62.733	ENSMEUG00000011926	-	64	62.733	Notamacropus_eugenii
ENSNLEG00000011282	PNLDC1	55	65.972	ENSMEUG00000014042	-	100	65.972	Notamacropus_eugenii
ENSNLEG00000011282	PNLDC1	72	85.215	ENSOPRG00000003813	PNLDC1	70	85.215	Ochotona_princeps
ENSNLEG00000011282	PNLDC1	98	82.643	ENSODEG00000008047	PNLDC1	95	82.643	Octodon_degus
ENSNLEG00000011282	PNLDC1	96	58.566	ENSOANG00000012199	PNLDC1	95	59.325	Ornithorhynchus_anatinus
ENSNLEG00000011282	PNLDC1	99	84.884	ENSOCUG00000013867	PNLDC1	97	84.884	Oryctolagus_cuniculus
ENSNLEG00000011282	PNLDC1	99	87.354	ENSOGAG00000007331	PNLDC1	97	87.354	Otolemur_garnettii
ENSNLEG00000011282	PNLDC1	99	84.302	ENSOARG00000004585	PNLDC1	97	84.302	Ovis_aries
ENSNLEG00000011282	PNLDC1	98	96.055	ENSPPAG00000026651	PNLDC1	95	96.055	Pan_paniscus
ENSNLEG00000011282	PNLDC1	99	85.853	ENSPPRG00000012854	PNLDC1	97	85.853	Panthera_pardus
ENSNLEG00000011282	PNLDC1	97	84.950	ENSPTIG00000011501	PNLDC1	95	84.950	Panthera_tigris_altaica
ENSNLEG00000011282	PNLDC1	100	95.769	ENSPTRG00000018762	PNLDC1	100	95.769	Pan_troglodytes
ENSNLEG00000011282	PNLDC1	98	95.069	ENSPANG00000022009	PNLDC1	95	95.069	Papio_anubis
ENSNLEG00000011282	PNLDC1	62	55.692	ENSPSIG00000011419	PNLDC1	99	55.692	Pelodiscus_sinensis
ENSNLEG00000011282	PNLDC1	99	83.915	ENSPEMG00000016301	Pnldc1	97	83.915	Peromyscus_maniculatus_bairdii
ENSNLEG00000011282	PNLDC1	84	75.566	ENSPCIG00000023412	PNLDC1	100	75.566	Phascolarctos_cinereus
ENSNLEG00000011282	PNLDC1	98	89.370	ENSPPYG00000017148	PNLDC1	95	89.370	Pongo_abelii
ENSNLEG00000011282	PNLDC1	99	75.244	ENSPCAG00000014169	PNLDC1	97	75.244	Procavia_capensis
ENSNLEG00000011282	PNLDC1	99	87.016	ENSPCOG00000025722	PNLDC1	97	87.016	Propithecus_coquereli
ENSNLEG00000011282	PNLDC1	71	87.838	ENSPVAG00000005325	PNLDC1	70	87.838	Pteropus_vampyrus
ENSNLEG00000011282	PNLDC1	99	83.721	ENSRNOG00000023140	Pnldc1	100	85.625	Rattus_norvegicus
ENSNLEG00000011282	PNLDC1	98	94.477	ENSRBIG00000033806	PNLDC1	95	94.477	Rhinopithecus_bieti
ENSNLEG00000011282	PNLDC1	100	94.423	ENSRROG00000043919	PNLDC1	100	94.423	Rhinopithecus_roxellana
ENSNLEG00000011282	PNLDC1	98	92.899	ENSSBOG00000019135	PNLDC1	95	92.899	Saimiri_boliviensis_boliviensis
ENSNLEG00000011282	PNLDC1	97	75.639	ENSSHAG00000015192	PNLDC1	97	75.639	Sarcophilus_harrisii
ENSNLEG00000011282	PNLDC1	55	64.706	ENSSPUG00000004627	PNLDC1	99	65.179	Sphenodon_punctatus
ENSNLEG00000011282	PNLDC1	99	85.185	ENSSSCG00000004046	PNLDC1	100	85.185	Sus_scrofa
ENSNLEG00000011282	PNLDC1	93	58.557	ENSTGUG00000011418	PNLDC1	99	58.557	Taeniopygia_guttata
ENSNLEG00000011282	PNLDC1	99	77.043	ENSTBEG00000009131	PNLDC1	99	77.043	Tupaia_belangeri
ENSNLEG00000011282	PNLDC1	71	80.541	ENSTTRG00000010409	PNLDC1	70	80.541	Tursiops_truncatus
ENSNLEG00000011282	PNLDC1	99	72.762	ENSUAMG00000015783	PNLDC1	97	72.762	Ursus_americanus
ENSNLEG00000011282	PNLDC1	97	79.412	ENSUMAG00000011903	PNLDC1	99	79.412	Ursus_maritimus
ENSNLEG00000011282	PNLDC1	95	86.694	ENSVVUG00000006586	PNLDC1	99	87.269	Vulpes_vulpes