EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000011621 (Gene tree)
Gene ID: 100584523
Gene Symbol: RIOK1
Alias: AD034|FLJ30006|RRP10|bA288G3.1
Full Name: RIO kinase 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 28001 bases
Position: chr8:57870307-57898307
Accession: 100584523
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000014181	RIO1	PF01163.22	9.8e-65	1	1
ENSNLEP00000033856	RIO1	PF01163.22	2.5e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000014874	RIOK1-202	1608	XM_003272244	ENSNLEP00000014181	535 (aa)	XP_003272292	G1RLS1
ENSNLET00000053407	RIOK1-201	1569	-	ENSNLEP00000033856	522 (aa)	-	A0A2I3GR89

Gene Model

Click here to download ENSNLEG00000011621's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000011621's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000011621	RIOK1	55	39.936	ENSNLEG00000006758	RIOK3	57	42.412

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000011621	RIOK1	100	88.028	ENSG00000124784	RIOK1	97	95.652	Homo_sapiens
ENSNLEG00000011621	RIOK1	56	63.754	ENSAPOG00000015632	riok1	99	63.754	Acanthochromis_polyacanthus
ENSNLEG00000011621	RIOK1	100	79.613	ENSAMEG00000017367	RIOK1	100	78.559	Ailuropoda_melanoleuca
ENSNLEG00000011621	RIOK1	87	64.887	ENSACIG00000003735	riok1	87	66.109	Amphilophus_citrinellus
ENSNLEG00000011621	RIOK1	99	59.890	ENSAOCG00000011818	riok1	100	60.469	Amphiprion_ocellaris
ENSNLEG00000011621	RIOK1	99	60.401	ENSAPEG00000001345	riok1	100	60.721	Amphiprion_percula
ENSNLEG00000011621	RIOK1	80	68.372	ENSATEG00000006594	riok1	99	68.372	Anabas_testudineus
ENSNLEG00000011621	RIOK1	82	74.737	ENSAPLG00000004196	RIOK1	100	74.947	Anas_platyrhynchos
ENSNLEG00000011621	RIOK1	100	68.357	ENSACAG00000000695	RIOK1	100	68.310	Anolis_carolinensis
ENSNLEG00000011621	RIOK1	100	75.352	ENSANAG00000023777	RIOK1	100	75.176	Aotus_nancymaae
ENSNLEG00000011621	RIOK1	98	59.818	ENSACLG00000015799	riok1	99	59.455	Astatotilapia_calliptera
ENSNLEG00000011621	RIOK1	99	61.672	ENSAMXG00000015286	riok1	99	61.419	Astyanax_mexicanus
ENSNLEG00000011621	RIOK1	100	78.873	ENSBTAG00000013821	RIOK1	100	78.873	Bos_taurus
ENSNLEG00000011621	RIOK1	79	42.384	WBGene00019698	riok-1	85	44.944	Caenorhabditis_elegans
ENSNLEG00000011621	RIOK1	100	85.211	ENSCJAG00000042960	RIOK1	100	85.211	Callithrix_jacchus
ENSNLEG00000011621	RIOK1	100	78.735	ENSCAFG00000009563	RIOK1	100	78.910	Canis_familiaris
ENSNLEG00000011621	RIOK1	97	75.681	ENSCAFG00020013233	RIOK1	99	75.862	Canis_lupus_dingo
ENSNLEG00000011621	RIOK1	100	77.817	ENSCHIG00000001534	RIOK1	100	77.817	Capra_hircus
ENSNLEG00000011621	RIOK1	63	83.611	ENSTSYG00000011368	RIOK1	100	83.180	Carlito_syrichta
ENSNLEG00000011621	RIOK1	77	80.222	ENSCAPG00000008489	RIOK1	100	80.603	Cavia_aperea
ENSNLEG00000011621	RIOK1	97	77.158	ENSCPOG00000009882	RIOK1	100	78.246	Cavia_porcellus
ENSNLEG00000011621	RIOK1	100	86.972	ENSCCAG00000024061	RIOK1	100	85.739	Cebus_capucinus
ENSNLEG00000011621	RIOK1	100	85.211	ENSCATG00000001548	RIOK1	100	84.683	Cercocebus_atys
ENSNLEG00000011621	RIOK1	100	80.316	ENSCLAG00000003522	RIOK1	100	79.965	Chinchilla_lanigera
ENSNLEG00000011621	RIOK1	87	91.476	ENSCSAG00000007396	RIOK1	98	83.271	Chlorocebus_sabaeus
ENSNLEG00000011621	RIOK1	65	94.444	ENSCHOG00000001873	RIOK1	62	94.444	Choloepus_hoffmanni
ENSNLEG00000011621	RIOK1	87	75.311	ENSCPBG00000008685	RIOK1	91	67.857	Chrysemys_picta_bellii
ENSNLEG00000011621	RIOK1	100	85.739	ENSCANG00000032919	RIOK1	100	85.211	Colobus_angolensis_palliatus
ENSNLEG00000011621	RIOK1	100	72.935	ENSCGRG00001018868	Riok1	100	72.535	Cricetulus_griseus_chok1gshd
ENSNLEG00000011621	RIOK1	100	72.935	ENSCGRG00000008015	Riok1	100	72.535	Cricetulus_griseus_crigri
ENSNLEG00000011621	RIOK1	87	49.353	ENSCSEG00000015014	riok1	86	49.672	Cynoglossus_semilaevis
ENSNLEG00000011621	RIOK1	56	61.184	ENSCVAG00000011291	riok1	99	60.897	Cyprinodon_variegatus
ENSNLEG00000011621	RIOK1	99	62.050	ENSDARG00000016399	riok1	100	63.225	Danio_rerio
ENSNLEG00000011621	RIOK1	100	77.661	ENSDNOG00000015813	RIOK1	100	77.487	Dasypus_novemcinctus
ENSNLEG00000011621	RIOK1	100	79.649	ENSDORG00000008530	Riok1	100	80.000	Dipodomys_ordii
ENSNLEG00000011621	RIOK1	67	52.770	FBgn0036187	RIOK1	82	46.170	Drosophila_melanogaster
ENSNLEG00000011621	RIOK1	100	76.937	ENSETEG00000020273	RIOK1	100	77.113	Echinops_telfairi
ENSNLEG00000011621	RIOK1	99	56.607	ENSEBUG00000013672	riok1	99	56.607	Eptatretus_burgeri
ENSNLEG00000011621	RIOK1	87	86.902	ENSEASG00005012032	RIOK1	94	79.323	Equus_asinus_asinus
ENSNLEG00000011621	RIOK1	100	80.106	ENSECAG00000009007	RIOK1	100	80.106	Equus_caballus
ENSNLEG00000011621	RIOK1	70	71.722	ENSEEUG00000007123	RIOK1	100	63.864	Erinaceus_europaeus
ENSNLEG00000011621	RIOK1	99	60.180	ENSELUG00000017029	riok1	99	60.799	Esox_lucius
ENSNLEG00000011621	RIOK1	100	78.671	ENSFCAG00000027290	RIOK1	100	77.273	Felis_catus
ENSNLEG00000011621	RIOK1	100	69.772	ENSFALG00000013244	RIOK1	100	70.123	Ficedula_albicollis
ENSNLEG00000011621	RIOK1	100	78.735	ENSFDAG00000019139	RIOK1	100	78.910	Fukomys_damarensis
ENSNLEG00000011621	RIOK1	70	72.074	ENSFHEG00000021419	riok1	83	72.074	Fundulus_heteroclitus
ENSNLEG00000011621	RIOK1	75	65.860	ENSGMOG00000018668	riok1	87	72.046	Gadus_morhua
ENSNLEG00000011621	RIOK1	56	69.817	ENSGALG00000012795	RIOK1	100	70.427	Gallus_gallus
ENSNLEG00000011621	RIOK1	90	54.527	ENSGAFG00000004091	riok1	79	58.036	Gambusia_affinis
ENSNLEG00000011621	RIOK1	97	61.390	ENSGACG00000002496	riok1	94	66.109	Gasterosteus_aculeatus
ENSNLEG00000011621	RIOK1	87	73.718	ENSGAGG00000002262	RIOK1	99	71.546	Gopherus_agassizii
ENSNLEG00000011621	RIOK1	100	83.022	ENSGGOG00000011037	RIOK1	100	82.430	Gorilla_gorilla
ENSNLEG00000011621	RIOK1	100	74.692	ENSHGLG00000008699	RIOK1	100	74.868	Heterocephalus_glaber_female
ENSNLEG00000011621	RIOK1	100	75.044	ENSHGLG00100008188	RIOK1	100	75.220	Heterocephalus_glaber_male
ENSNLEG00000011621	RIOK1	87	62.398	ENSHCOG00000013275	riok1	90	63.711	Hippocampus_comes
ENSNLEG00000011621	RIOK1	99	62.544	ENSIPUG00000003290	riok1	100	63.240	Ictalurus_punctatus
ENSNLEG00000011621	RIOK1	100	79.789	ENSSTOG00000009289	RIOK1	100	80.316	Ictidomys_tridecemlineatus
ENSNLEG00000011621	RIOK1	100	77.876	ENSJJAG00000015152	Riok1	100	77.876	Jaculus_jaculus
ENSNLEG00000011621	RIOK1	70	70.361	ENSKMAG00000019378	riok1	99	70.361	Kryptolebias_marmoratus
ENSNLEG00000011621	RIOK1	87	63.179	ENSLBEG00000016650	riok1	86	65.432	Labrus_bergylta
ENSNLEG00000011621	RIOK1	100	59.474	ENSLACG00000000300	RIOK1	100	59.790	Latimeria_chalumnae
ENSNLEG00000011621	RIOK1	99	62.923	ENSLOCG00000011728	riok1	99	61.140	Lepisosteus_oculatus
ENSNLEG00000011621	RIOK1	99	78.292	ENSLAFG00000005504	RIOK1	100	77.402	Loxodonta_africana
ENSNLEG00000011621	RIOK1	100	84.859	ENSMFAG00000029990	RIOK1	100	84.331	Macaca_fascicularis
ENSNLEG00000011621	RIOK1	100	84.683	ENSMMUG00000015577	RIOK1	100	84.155	Macaca_mulatta
ENSNLEG00000011621	RIOK1	100	86.331	ENSMNEG00000034396	RIOK1	99	89.655	Macaca_nemestrina
ENSNLEG00000011621	RIOK1	100	85.211	ENSMLEG00000026327	RIOK1	100	84.683	Mandrillus_leucophaeus
ENSNLEG00000011621	RIOK1	98	59.239	ENSMAMG00000019557	riok1	99	60.036	Mastacembelus_armatus
ENSNLEG00000011621	RIOK1	98	60.182	ENSMZEG00005019482	riok1	99	59.818	Maylandia_zebra
ENSNLEG00000011621	RIOK1	100	64.177	ENSMGAG00000003816	RIOK1	100	66.031	Meleagris_gallopavo
ENSNLEG00000011621	RIOK1	100	73.638	ENSMAUG00000012751	Riok1	100	72.535	Mesocricetus_auratus
ENSNLEG00000011621	RIOK1	100	81.690	ENSMICG00000044301	RIOK1	84	81.690	Microcebus_murinus
ENSNLEG00000011621	RIOK1	100	72.535	ENSMOCG00000017032	Riok1	100	72.134	Microtus_ochrogaster
ENSNLEG00000011621	RIOK1	82	59.746	ENSMMOG00000020598	riok1	87	60.169	Mola_mola
ENSNLEG00000011621	RIOK1	100	70.979	ENSMODG00000009964	RIOK1	100	70.105	Monodelphis_domestica
ENSNLEG00000011621	RIOK1	87	61.373	ENSMALG00000019982	riok1	92	62.144	Monopterus_albus
ENSNLEG00000011621	RIOK1	99	72.064	MGP_CAROLIEiJ_G0018439	Riok1	99	71.836	Mus_caroli
ENSNLEG00000011621	RIOK1	99	70.796	ENSMUSG00000021428	Riok1	99	71.530	Mus_musculus
ENSNLEG00000011621	RIOK1	99	72.014	MGP_PahariEiJ_G0019507	Riok1	99	71.836	Mus_pahari
ENSNLEG00000011621	RIOK1	99	71.352	MGP_SPRETEiJ_G0019319	Riok1	99	71.658	Mus_spretus
ENSNLEG00000011621	RIOK1	100	76.883	ENSMPUG00000000570	RIOK1	100	77.233	Mustela_putorius_furo
ENSNLEG00000011621	RIOK1	100	79.965	ENSMLUG00000015312	RIOK1	100	79.262	Myotis_lucifugus
ENSNLEG00000011621	RIOK1	100	77.993	ENSNGAG00000021734	Riok1	100	78.345	Nannospalax_galili
ENSNLEG00000011621	RIOK1	75	69.639	ENSNBRG00000017489	riok1	74	73.008	Neolamprologus_brichardi
ENSNLEG00000011621	RIOK1	70	51.157	ENSMEUG00000006679	-	66	58.576	Notamacropus_eugenii
ENSNLEG00000011621	RIOK1	69	79.245	ENSOPRG00000009524	RIOK1	100	79.245	Ochotona_princeps
ENSNLEG00000011621	RIOK1	74	72.319	ENSODEG00000005663	RIOK1	100	72.319	Octodon_degus
ENSNLEG00000011621	RIOK1	98	60.980	ENSONIG00000014010	riok1	98	61.011	Oreochromis_niloticus
ENSNLEG00000011621	RIOK1	80	76.078	ENSOANG00000012553	RIOK1	100	76.509	Ornithorhynchus_anatinus
ENSNLEG00000011621	RIOK1	100	78.559	ENSOCUG00000011824	RIOK1	100	78.559	Oryctolagus_cuniculus
ENSNLEG00000011621	RIOK1	98	62.167	ENSORLG00000008221	riok1	86	68.374	Oryzias_latipes
ENSNLEG00000011621	RIOK1	83	68.386	ENSORLG00020013838	riok1	60	68.386	Oryzias_latipes_hni
ENSNLEG00000011621	RIOK1	98	60.734	ENSORLG00015009817	riok1	86	66.809	Oryzias_latipes_hsok
ENSNLEG00000011621	RIOK1	98	60.148	ENSOMEG00000002758	riok1	78	65.665	Oryzias_melastigma
ENSNLEG00000011621	RIOK1	100	73.975	ENSOGAG00000010192	RIOK1	100	73.975	Otolemur_garnettii
ENSNLEG00000011621	RIOK1	100	78.345	ENSOARG00000017747	RIOK1	100	78.345	Ovis_aries
ENSNLEG00000011621	RIOK1	100	78.686	ENSPPAG00000016349	RIOK1	100	82.875	Pan_paniscus
ENSNLEG00000011621	RIOK1	100	78.846	ENSPPRG00000001932	RIOK1	100	77.448	Panthera_pardus
ENSNLEG00000011621	RIOK1	100	79.021	ENSPTIG00000018545	RIOK1	100	77.622	Panthera_tigris_altaica
ENSNLEG00000011621	RIOK1	100	87.676	ENSPTRG00000017700	RIOK1	100	87.676	Pan_troglodytes
ENSNLEG00000011621	RIOK1	100	85.387	ENSPANG00000016522	RIOK1	100	84.859	Papio_anubis
ENSNLEG00000011621	RIOK1	99	61.319	ENSPKIG00000006442	riok1	100	62.210	Paramormyrops_kingsleyae
ENSNLEG00000011621	RIOK1	100	69.312	ENSPSIG00000006488	RIOK1	99	69.718	Pelodiscus_sinensis
ENSNLEG00000011621	RIOK1	71	67.684	ENSPMGG00000017807	riok1	95	63.408	Periophthalmus_magnuspinnatus
ENSNLEG00000011621	RIOK1	100	73.814	ENSPEMG00000017844	Riok1	100	73.063	Peromyscus_maniculatus_bairdii
ENSNLEG00000011621	RIOK1	59	74.845	ENSPMAG00000006351	riok1	98	65.049	Petromyzon_marinus
ENSNLEG00000011621	RIOK1	87	75.826	ENSPCIG00000012653	RIOK1	94	68.668	Phascolarctos_cinereus
ENSNLEG00000011621	RIOK1	98	56.330	ENSPFOG00000011532	riok1	87	62.527	Poecilia_formosa
ENSNLEG00000011621	RIOK1	98	56.147	ENSPLAG00000001341	riok1	87	62.527	Poecilia_latipinna
ENSNLEG00000011621	RIOK1	98	56.330	ENSPMEG00000007710	riok1	89	62.527	Poecilia_mexicana
ENSNLEG00000011621	RIOK1	98	56.192	ENSPREG00000009237	riok1	88	62.716	Poecilia_reticulata
ENSNLEG00000011621	RIOK1	100	86.995	ENSPPYG00000016207	RIOK1	100	87.346	Pongo_abelii
ENSNLEG00000011621	RIOK1	100	64.789	ENSPCAG00000007892	RIOK1	100	64.789	Procavia_capensis
ENSNLEG00000011621	RIOK1	100	80.560	ENSPVAG00000014091	RIOK1	100	78.984	Pteropus_vampyrus
ENSNLEG00000011621	RIOK1	56	65.924	ENSPNYG00000004465	riok1	100	65.924	Pundamilia_nyererei
ENSNLEG00000011621	RIOK1	99	60.984	ENSPNAG00000015435	riok1	99	60.627	Pygocentrus_nattereri
ENSNLEG00000011621	RIOK1	99	72.954	ENSRNOG00000014049	Riok1	100	76.724	Rattus_norvegicus
ENSNLEG00000011621	RIOK1	100	85.387	ENSRBIG00000036685	RIOK1	100	84.859	Rhinopithecus_bieti
ENSNLEG00000011621	RIOK1	100	85.563	ENSRROG00000036611	RIOK1	100	85.035	Rhinopithecus_roxellana
ENSNLEG00000011621	RIOK1	68	35.732	YOR119C	RIO1	96	35.714	Saccharomyces_cerevisiae
ENSNLEG00000011621	RIOK1	100	86.620	ENSSBOG00000012588	RIOK1	100	86.620	Saimiri_boliviensis_boliviensis
ENSNLEG00000011621	RIOK1	92	73.477	ENSSHAG00000003091	RIOK1	97	71.262	Sarcophilus_harrisii
ENSNLEG00000011621	RIOK1	86	65.182	ENSSFOG00015001035	riok1	99	60.000	Scleropages_formosus
ENSNLEG00000011621	RIOK1	56	67.550	ENSSDUG00000007291	riok1	100	67.881	Seriola_dumerili
ENSNLEG00000011621	RIOK1	98	60.110	ENSSLDG00000017657	riok1	99	59.559	Seriola_lalandi_dorsalis
ENSNLEG00000011621	RIOK1	86	67.660	ENSSPUG00000007624	RIOK1	84	67.660	Sphenodon_punctatus
ENSNLEG00000011621	RIOK1	99	62.706	ENSSPAG00000022710	riok1	100	62.340	Stegastes_partitus
ENSNLEG00000011621	RIOK1	100	75.528	ENSSSCG00000001024	RIOK1	100	74.472	Sus_scrofa
ENSNLEG00000011621	RIOK1	100	69.792	ENSTGUG00000002331	RIOK1	100	70.228	Taeniopygia_guttata
ENSNLEG00000011621	RIOK1	75	58.454	ENSTRUG00000002854	riok1	93	59.843	Takifugu_rubripes
ENSNLEG00000011621	RIOK1	50	59.220	ENSTRUG00000001575	-	100	59.220	Takifugu_rubripes
ENSNLEG00000011621	RIOK1	99	54.401	ENSTNIG00000003078	riok1	88	58.012	Tetraodon_nigroviridis
ENSNLEG00000011621	RIOK1	100	76.056	ENSTBEG00000016730	RIOK1	100	75.528	Tupaia_belangeri
ENSNLEG00000011621	RIOK1	76	96.429	ENSTTRG00000017335	RIOK1	87	96.429	Tursiops_truncatus
ENSNLEG00000011621	RIOK1	87	86.307	ENSUAMG00000003721	RIOK1	96	77.111	Ursus_americanus
ENSNLEG00000011621	RIOK1	100	79.438	ENSUMAG00000018461	RIOK1	100	78.383	Ursus_maritimus
ENSNLEG00000011621	RIOK1	60	97.222	ENSVPAG00000010813	-	60	97.222	Vicugna_pacos
ENSNLEG00000011621	RIOK1	100	78.383	ENSVVUG00000005018	RIOK1	100	78.559	Vulpes_vulpes
ENSNLEG00000011621	RIOK1	87	66.869	ENSXETG00000020436	riok1	86	67.769	Xenopus_tropicalis
ENSNLEG00000011621	RIOK1	81	61.239	ENSXCOG00000000245	riok1	100	61.239	Xiphophorus_couchianus
ENSNLEG00000011621	RIOK1	71	68.193	ENSXMAG00000014572	riok1	76	68.193	Xiphophorus_maculatus