EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000011661 (Gene tree)
Gene ID: 100592659
Gene Symbol: -
Alias: -
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 16184 bases
Position: chr4:29967930-29984113
Accession: 100592659
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000030807	MBD	PF01429.19	3.6e-16	1	1
ENSNLEP00000025919	MBD	PF01429.19	3.8e-16	1	1
ENSNLEP00000047213	MBD	PF01429.19	3.8e-16	1	1
ENSNLEP00000036593	MBD	PF01429.19	3.8e-16	1	1
ENSNLEP00000038651	MBD	PF01429.19	3.9e-16	1	1
ENSNLEP00000041159	MBD	PF01429.19	3.9e-16	1	1
ENSNLEP00000036191	MBD	PF01429.19	4e-16	1	1
ENSNLEP00000014267	MBD	PF01429.19	4.3e-16	1	1
ENSNLEP00000045186	MBD	PF01429.19	4.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000042070	-	3115	XM_003267502	ENSNLEP00000036593	556 (aa)	XP_003267550	A0A2I3GYZ8
ENSNLET00000040888	-	3190	XM_003267497	ENSNLEP00000045186	655 (aa)	XP_003267545	A0A2I3HNZ7
ENSNLET00000037627	-	1761	-	ENSNLEP00000041159	586 (aa)	-	A0A2I3HBZ5
ENSNLET00000050809	-	2843	XM_003267506	ENSNLEP00000038651	567 (aa)	XP_003267554	A0A2I3H551
ENSNLET00000051259	-	1650	-	ENSNLEP00000047213	549 (aa)	-	A0A2I3HUE8
ENSNLET00000055882	-	3094	XM_003267499	ENSNLEP00000036191	549 (aa)	XP_003267547	A0A2I3GY12
ENSNLET00000014972	-	3262	XM_003267496	ENSNLEP00000014267	605 (aa)	XP_003267544	G1RM03
ENSNLET00000048778	-	2791	XM_003267503	ENSNLEP00000030807	630 (aa)	XP_003267551	A0A2I3GHQ0
ENSNLET00000057856	-	3257	XM_003267498	ENSNLEP00000025919	550 (aa)	XP_003267546	A0A2I3G0M9

Gene Model

Click here to download ENSNLEG00000011661's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000011661's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000011661	-	98	88.619	ENSNLEG00000032711	-	100	82.253

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000011661	-	100	99.091	ENSG00000141644	MBD1	100	99.091	Homo_sapiens
ENSNLEG00000011661	-	100	86.867	ENSAMEG00000000238	MBD1	96	87.342	Ailuropoda_melanoleuca
ENSNLEG00000011661	-	69	45.297	ENSACAG00000006091	-	100	45.278	Anolis_carolinensis
ENSNLEG00000011661	-	100	95.556	ENSANAG00000036253	MBD1	100	95.556	Aotus_nancymaae
ENSNLEG00000011661	-	100	85.974	ENSBTAG00000003801	MBD1	100	86.634	Bos_taurus
ENSNLEG00000011661	-	100	95.267	ENSCJAG00000004959	MBD1	100	95.267	Callithrix_jacchus
ENSNLEG00000011661	-	100	85.895	ENSCAFG00000018928	MBD1	96	86.688	Canis_familiaris
ENSNLEG00000011661	-	99	85.072	ENSCAFG00020024272	MBD1	97	85.875	Canis_lupus_dingo
ENSNLEG00000011661	-	100	85.974	ENSCHIG00000021134	MBD1	100	86.634	Capra_hircus
ENSNLEG00000011661	-	100	90.476	ENSTSYG00000000509	MBD1	100	90.476	Carlito_syrichta
ENSNLEG00000011661	-	99	71.904	ENSCAPG00000015782	MBD1	96	71.009	Cavia_aperea
ENSNLEG00000011661	-	100	73.623	ENSCPOG00000001671	MBD1	100	73.456	Cavia_porcellus
ENSNLEG00000011661	-	100	93.841	ENSCCAG00000034600	MBD1	100	93.282	Cebus_capucinus
ENSNLEG00000011661	-	100	98.843	ENSCATG00000029959	MBD1	100	98.843	Cercocebus_atys
ENSNLEG00000011661	-	100	84.603	ENSCLAG00000007457	MBD1	89	84.603	Chinchilla_lanigera
ENSNLEG00000011661	-	100	99.174	ENSCSAG00000018070	MBD1	100	99.174	Chlorocebus_sabaeus
ENSNLEG00000011661	-	100	98.843	ENSCANG00000033425	MBD1	100	98.843	Colobus_angolensis_palliatus
ENSNLEG00000011661	-	100	74.220	ENSCGRG00001014843	Mbd1	100	74.220	Cricetulus_griseus_chok1gshd
ENSNLEG00000011661	-	99	65.498	ENSCGRG00000014135	Mbd1	96	65.498	Cricetulus_griseus_crigri
ENSNLEG00000011661	-	100	81.300	ENSDNOG00000015998	MBD1	100	82.567	Dasypus_novemcinctus
ENSNLEG00000011661	-	99	77.757	ENSDORG00000013917	Mbd1	97	78.354	Dipodomys_ordii
ENSNLEG00000011661	-	100	85.918	ENSEASG00005003857	MBD1	100	87.342	Equus_asinus_asinus
ENSNLEG00000011661	-	100	86.161	ENSECAG00000011497	MBD1	80	87.644	Equus_caballus
ENSNLEG00000011661	-	100	87.500	ENSFCAG00000015730	MBD1	100	87.975	Felis_catus
ENSNLEG00000011661	-	99	79.636	ENSFDAG00000011085	MBD1	96	80.480	Fukomys_damarensis
ENSNLEG00000011661	-	70	30.964	ENSGACG00000012106	-	50	60.656	Gasterosteus_aculeatus
ENSNLEG00000011661	-	100	98.678	ENSGGOG00000016966	MBD1	100	98.678	Gorilla_gorilla
ENSNLEG00000011661	-	100	85.455	ENSHGLG00000008740	MBD1	100	85.455	Heterocephalus_glaber_female
ENSNLEG00000011661	-	93	86.624	ENSHGLG00100005198	MBD1	100	86.624	Heterocephalus_glaber_male
ENSNLEG00000011661	-	62	36.145	ENSIPUG00000015243	-	50	50.602	Ictalurus_punctatus
ENSNLEG00000011661	-	100	82.602	ENSSTOG00000007780	MBD1	100	82.927	Ictidomys_tridecemlineatus
ENSNLEG00000011661	-	98	78.519	ENSJJAG00000022859	Mbd1	96	78.519	Jaculus_jaculus
ENSNLEG00000011661	-	96	34.058	ENSLACG00000002414	-	51	65.079	Latimeria_chalumnae
ENSNLEG00000011661	-	99	75.290	ENSLAFG00000031328	MBD1	97	75.374	Loxodonta_africana
ENSNLEG00000011661	-	100	98.678	ENSMFAG00000026335	MBD1	100	98.678	Macaca_fascicularis
ENSNLEG00000011661	-	100	98.545	ENSMMUG00000009050	MBD1	100	98.545	Macaca_mulatta
ENSNLEG00000011661	-	100	98.678	ENSMNEG00000038822	MBD1	100	98.678	Macaca_nemestrina
ENSNLEG00000011661	-	100	99.008	ENSMLEG00000043121	MBD1	100	99.008	Mandrillus_leucophaeus
ENSNLEG00000011661	-	56	55.385	ENSMAMG00000023341	-	61	32.701	Mastacembelus_armatus
ENSNLEG00000011661	-	100	89.431	ENSMICG00000006414	MBD1	100	89.756	Microcebus_murinus
ENSNLEG00000011661	-	51	73.498	ENSMOCG00000011976	-	100	73.498	Microtus_ochrogaster
ENSNLEG00000011661	-	71	42.927	ENSMODG00000001286	-	58	43.928	Monodelphis_domestica
ENSNLEG00000011661	-	99	67.091	ENSMUSG00000024561	Mbd1	97	67.732	Mus_musculus
ENSNLEG00000011661	-	100	67.886	MGP_PahariEiJ_G0019128	Mbd1	100	67.727	Mus_pahari
ENSNLEG00000011661	-	98	68.558	MGP_SPRETEiJ_G0023304	Mbd1	99	68.994	Mus_spretus
ENSNLEG00000011661	-	100	86.392	ENSMPUG00000008843	MBD1	96	86.867	Mustela_putorius_furo
ENSNLEG00000011661	-	100	84.444	ENSMLUG00000008286	MBD1	96	84.444	Myotis_lucifugus
ENSNLEG00000011661	-	98	75.818	ENSNGAG00000011412	Mbd1	96	75.818	Nannospalax_galili
ENSNLEG00000011661	-	100	74.050	ENSOPRG00000007647	MBD1	100	74.050	Ochotona_princeps
ENSNLEG00000011661	-	99	82.070	ENSODEG00000018451	MBD1	97	82.070	Octodon_degus
ENSNLEG00000011661	-	92	46.516	ENSOANG00000014593	-	100	47.575	Ornithorhynchus_anatinus
ENSNLEG00000011661	-	100	82.726	ENSOCUG00000006554	MBD1	100	83.201	Oryctolagus_cuniculus
ENSNLEG00000011661	-	100	86.875	ENSOGAG00000003784	MBD1	96	86.875	Otolemur_garnettii
ENSNLEG00000011661	-	100	85.443	ENSOARG00000004218	MBD1	95	86.076	Ovis_aries
ENSNLEG00000011661	-	100	98.843	ENSPPAG00000038886	MBD1	100	98.843	Pan_paniscus
ENSNLEG00000011661	-	100	87.974	ENSPPRG00000021387	MBD1	100	88.468	Panthera_pardus
ENSNLEG00000011661	-	100	87.974	ENSPTIG00000021231	MBD1	100	88.468	Panthera_tigris_altaica
ENSNLEG00000011661	-	100	98.909	ENSPTRG00000010021	MBD1	100	98.909	Pan_troglodytes
ENSNLEG00000011661	-	100	98.889	ENSPANG00000010867	MBD1	100	98.889	Papio_anubis
ENSNLEG00000011661	-	99	65.954	ENSPEMG00000022630	Mbd1	97	65.893	Peromyscus_maniculatus_bairdii
ENSNLEG00000011661	-	92	56.494	ENSPCIG00000027937	-	79	47.140	Phascolarctos_cinereus
ENSNLEG00000011661	-	100	98.843	ENSPPYG00000009158	MBD1	91	98.843	Pongo_abelii
ENSNLEG00000011661	-	99	76.033	ENSPCAG00000001648	MBD1	93	86.260	Procavia_capensis
ENSNLEG00000011661	-	100	92.079	ENSPCOG00000012450	MBD1	100	92.079	Propithecus_coquereli
ENSNLEG00000011661	-	99	56.661	ENSRNOG00000024104	Mbd1	96	57.603	Rattus_norvegicus
ENSNLEG00000011661	-	100	98.561	ENSRBIG00000041294	MBD1	100	98.561	Rhinopithecus_bieti
ENSNLEG00000011661	-	100	98.678	ENSRROG00000032517	MBD1	100	98.678	Rhinopithecus_roxellana
ENSNLEG00000011661	-	100	94.809	ENSSBOG00000027169	MBD1	100	94.809	Saimiri_boliviensis_boliviensis
ENSNLEG00000011661	-	84	46.039	ENSSHAG00000003661	-	100	47.826	Sarcophilus_harrisii
ENSNLEG00000011661	-	51	51.111	ENSSPAG00000021447	mbd1b	52	37.430	Stegastes_partitus
ENSNLEG00000011661	-	100	85.620	ENSSSCG00000004516	MBD1	100	85.620	Sus_scrofa
ENSNLEG00000011661	-	51	50.538	ENSTRUG00000013422	mbd1b	52	30.947	Takifugu_rubripes
ENSNLEG00000011661	-	74	82.917	ENSTBEG00000012651	-	68	82.917	Tupaia_belangeri
ENSNLEG00000011661	-	100	84.349	ENSTTRG00000015523	MBD1	100	85.008	Tursiops_truncatus
ENSNLEG00000011661	-	93	92.254	ENSUAMG00000004752	MBD1	100	83.663	Ursus_americanus
ENSNLEG00000011661	-	100	87.315	ENSUMAG00000002947	MBD1	100	87.809	Ursus_maritimus