EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000011851 (Gene tree)
Gene ID: 100579570
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 51925 bases
Position: chr2:85523667-85575591
Accession: 100579570
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000014436	Ago_hook	PF10427.9	2.3e-19	1	1
ENSNLEP00000047605	Ago_hook	PF10427.9	2.5e-19	1	1
ENSNLEP00000042380	Ago_hook	PF10427.9	4.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000037054	TNRC6A-202	5775	XM_012505560	ENSNLEP00000047605	1924 (aa)	XP_012361014	A0A2I3HVN3
ENSNLET00000015154	TNRC6A-201	5823	-	ENSNLEP00000014436	1940 (aa)	-	G1RMH2
ENSNLET00000047037	TNRC6A-203	5631	-	ENSNLEP00000042380	1876 (aa)	-	A0A2I3HFT6

Gene Model

Click here to download ENSNLEG00000011851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000011851's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000011851	TNRC6A	84	39.661	ENSNLEG00000015311	TNRC6B	82	41.528
ENSNLEG00000011851	TNRC6A	95	46.963	ENSNLEG00000000047	TNRC6C	98	41.004

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000011851	TNRC6A	99	96.968	ENSG00000090905	TNRC6A	98	96.968	Homo_sapiens
ENSNLEG00000011851	TNRC6A	98	93.685	ENSAMEG00000009333	TNRC6A	99	93.718	Ailuropoda_melanoleuca
ENSNLEG00000011851	TNRC6A	98	79.605	ENSAPLG00000009978	TNRC6A	100	79.657	Anas_platyrhynchos
ENSNLEG00000011851	TNRC6A	95	53.719	ENSACAG00000011857	TNRC6A	94	55.885	Anolis_carolinensis
ENSNLEG00000011851	TNRC6A	99	96.168	ENSANAG00000025252	TNRC6A	98	96.168	Aotus_nancymaae
ENSNLEG00000011851	TNRC6A	92	56.031	ENSAMXG00000019919	tnrc6a	99	55.879	Astyanax_mexicanus
ENSNLEG00000011851	TNRC6A	99	92.803	ENSBTAG00000017999	TNRC6A	99	92.946	Bos_taurus
ENSNLEG00000011851	TNRC6A	99	96.273	ENSCJAG00000020677	TNRC6A	98	95.986	Callithrix_jacchus
ENSNLEG00000011851	TNRC6A	98	94.244	ENSCAFG00000017531	TNRC6A	99	94.244	Canis_familiaris
ENSNLEG00000011851	TNRC6A	98	94.438	ENSCAFG00020021160	TNRC6A	99	94.384	Canis_lupus_dingo
ENSNLEG00000011851	TNRC6A	99	92.423	ENSCHIG00000019448	TNRC6A	99	92.515	Capra_hircus
ENSNLEG00000011851	TNRC6A	98	94.726	ENSTSYG00000012711	TNRC6A	99	93.831	Carlito_syrichta
ENSNLEG00000011851	TNRC6A	98	94.219	ENSCPOG00000036684	TNRC6A	97	94.276	Cavia_porcellus
ENSNLEG00000011851	TNRC6A	99	96.434	ENSCCAG00000033664	TNRC6A	99	96.210	Cebus_capucinus
ENSNLEG00000011851	TNRC6A	99	97.567	ENSCATG00000019284	TNRC6A	98	97.567	Cercocebus_atys
ENSNLEG00000011851	TNRC6A	98	90.189	ENSCLAG00000010217	TNRC6A	97	90.194	Chinchilla_lanigera
ENSNLEG00000011851	TNRC6A	99	96.037	ENSCSAG00000006561	TNRC6A	98	96.037	Chlorocebus_sabaeus
ENSNLEG00000011851	TNRC6A	94	89.310	ENSCHOG00000009374	TNRC6A	92	89.378	Choloepus_hoffmanni
ENSNLEG00000011851	TNRC6A	92	81.095	ENSCPBG00000001881	TNRC6A	99	81.153	Chrysemys_picta_bellii
ENSNLEG00000011851	TNRC6A	99	96.344	ENSCANG00000041549	TNRC6A	99	96.344	Colobus_angolensis_palliatus
ENSNLEG00000011851	TNRC6A	98	92.884	ENSCGRG00001015021	Tnrc6a	99	91.697	Cricetulus_griseus_chok1gshd
ENSNLEG00000011851	TNRC6A	98	92.080	ENSCGRG00000013351	Tnrc6a	97	92.026	Cricetulus_griseus_crigri
ENSNLEG00000011851	TNRC6A	92	56.022	ENSDARG00000079688	tnrc6a	99	56.054	Danio_rerio
ENSNLEG00000011851	TNRC6A	98	91.023	ENSDNOG00000013989	TNRC6A	99	90.971	Dasypus_novemcinctus
ENSNLEG00000011851	TNRC6A	98	82.712	ENSETEG00000014658	TNRC6A	99	82.817	Echinops_telfairi
ENSNLEG00000011851	TNRC6A	98	93.908	ENSEASG00005017693	TNRC6A	99	93.354	Equus_asinus_asinus
ENSNLEG00000011851	TNRC6A	98	93.908	ENSECAG00000025056	TNRC6A	99	94.232	Equus_caballus
ENSNLEG00000011851	TNRC6A	98	86.975	ENSEEUG00000004530	TNRC6A	99	86.923	Erinaceus_europaeus
ENSNLEG00000011851	TNRC6A	98	93.369	ENSFCAG00000025236	TNRC6A	99	92.569	Felis_catus
ENSNLEG00000011851	TNRC6A	99	76.737	ENSFALG00000003757	TNRC6A	97	77.634	Ficedula_albicollis
ENSNLEG00000011851	TNRC6A	92	81.128	ENSGALG00000006068	TNRC6A	99	81.588	Gallus_gallus
ENSNLEG00000011851	TNRC6A	92	80.310	ENSGAGG00000023209	TNRC6A	99	80.654	Gopherus_agassizii
ENSNLEG00000011851	TNRC6A	99	96.598	ENSGGOG00000005137	TNRC6A	99	96.598	Gorilla_gorilla
ENSNLEG00000011851	TNRC6A	96	74.324	ENSHGLG00000007368	-	93	74.313	Heterocephalus_glaber_female
ENSNLEG00000011851	TNRC6A	98	94.457	ENSHGLG00000012474	-	97	94.457	Heterocephalus_glaber_female
ENSNLEG00000011851	TNRC6A	98	93.845	ENSHGLG00100012496	-	97	93.845	Heterocephalus_glaber_male
ENSNLEG00000011851	TNRC6A	98	93.562	ENSSTOG00000023394	TNRC6A	96	93.510	Ictidomys_tridecemlineatus
ENSNLEG00000011851	TNRC6A	98	67.787	ENSLACG00000006277	TNRC6A	100	68.459	Latimeria_chalumnae
ENSNLEG00000011851	TNRC6A	99	79.167	ENSLOCG00000005517	tnrc6a	90	79.167	Lepisosteus_oculatus
ENSNLEG00000011851	TNRC6A	98	92.623	ENSLAFG00000004209	TNRC6A	99	92.938	Loxodonta_africana
ENSNLEG00000011851	TNRC6A	98	97.811	ENSMFAG00000003824	TNRC6A	99	97.811	Macaca_fascicularis
ENSNLEG00000011851	TNRC6A	99	96.800	ENSMMUG00000020428	TNRC6A	98	96.800	Macaca_mulatta
ENSNLEG00000011851	TNRC6A	98	97.656	ENSMNEG00000034854	TNRC6A	99	97.656	Macaca_nemestrina
ENSNLEG00000011851	TNRC6A	99	96.856	ENSMLEG00000042737	TNRC6A	98	96.856	Mandrillus_leucophaeus
ENSNLEG00000011851	TNRC6A	95	80.430	ENSMGAG00000006455	TNRC6A	93	80.484	Meleagris_gallopavo
ENSNLEG00000011851	TNRC6A	98	92.776	ENSMAUG00000012750	Tnrc6a	97	92.776	Mesocricetus_auratus
ENSNLEG00000011851	TNRC6A	99	95.370	ENSMICG00000030685	TNRC6A	98	95.370	Microcebus_murinus
ENSNLEG00000011851	TNRC6A	98	93.096	ENSMOCG00000000152	Tnrc6a	97	92.880	Microtus_ochrogaster
ENSNLEG00000011851	TNRC6A	98	80.041	ENSMODG00000016348	TNRC6A	96	80.245	Monodelphis_domestica
ENSNLEG00000011851	TNRC6A	98	91.640	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	91.844	Mus_caroli
ENSNLEG00000011851	TNRC6A	98	92.017	ENSMUSG00000052707	Tnrc6a	99	92.199	Mus_musculus
ENSNLEG00000011851	TNRC6A	98	92.237	MGP_PahariEiJ_G0013635	Tnrc6a	100	92.482	Mus_pahari
ENSNLEG00000011851	TNRC6A	98	91.261	MGP_SPRETEiJ_G0031539	Tnrc6a	100	92.199	Mus_spretus
ENSNLEG00000011851	TNRC6A	98	82.571	ENSMPUG00000012324	TNRC6A	100	82.464	Mustela_putorius_furo
ENSNLEG00000011851	TNRC6A	98	90.291	ENSMLUG00000002701	TNRC6A	100	90.366	Myotis_lucifugus
ENSNLEG00000011851	TNRC6A	98	93.693	ENSNGAG00000020702	Tnrc6a	97	93.585	Nannospalax_galili
ENSNLEG00000011851	TNRC6A	76	84.885	ENSMEUG00000015959	-	74	84.995	Notamacropus_eugenii
ENSNLEG00000011851	TNRC6A	94	91.513	ENSOPRG00000005819	TNRC6A	93	91.882	Ochotona_princeps
ENSNLEG00000011851	TNRC6A	98	88.967	ENSODEG00000012802	TNRC6A	97	88.432	Octodon_degus
ENSNLEG00000011851	TNRC6A	88	81.117	ENSOANG00000007672	TNRC6A	99	81.159	Ornithorhynchus_anatinus
ENSNLEG00000011851	TNRC6A	98	90.790	ENSOCUG00000004325	TNRC6A	100	90.633	Oryctolagus_cuniculus
ENSNLEG00000011851	TNRC6A	98	94.139	ENSOGAG00000006666	TNRC6A	98	94.090	Otolemur_garnettii
ENSNLEG00000011851	TNRC6A	98	91.754	ENSOARG00000017950	TNRC6A	98	94.186	Ovis_aries
ENSNLEG00000011851	TNRC6A	99	96.762	ENSPPAG00000028379	TNRC6A	99	96.491	Pan_paniscus
ENSNLEG00000011851	TNRC6A	98	93.369	ENSPPRG00000005861	TNRC6A	97	93.315	Panthera_pardus
ENSNLEG00000011851	TNRC6A	98	92.432	ENSPTIG00000006346	TNRC6A	97	92.271	Panthera_tigris_altaica
ENSNLEG00000011851	TNRC6A	99	96.543	ENSPTRG00000007898	TNRC6A	99	96.543	Pan_troglodytes
ENSNLEG00000011851	TNRC6A	98	95.725	ENSPANG00000018523	TNRC6A	99	95.725	Papio_anubis
ENSNLEG00000011851	TNRC6A	88	79.310	ENSPKIG00000012859	tnrc6a	96	79.459	Paramormyrops_kingsleyae
ENSNLEG00000011851	TNRC6A	78	76.264	ENSPSIG00000003965	TNRC6A	100	76.332	Pelodiscus_sinensis
ENSNLEG00000011851	TNRC6A	98	92.988	ENSPEMG00000016318	Tnrc6a	97	92.880	Peromyscus_maniculatus_bairdii
ENSNLEG00000011851	TNRC6A	98	81.406	ENSPCIG00000012106	TNRC6A	100	81.726	Phascolarctos_cinereus
ENSNLEG00000011851	TNRC6A	99	95.885	ENSPPYG00000007202	TNRC6A	98	95.885	Pongo_abelii
ENSNLEG00000011851	TNRC6A	94	100.000	ENSPCAG00000008260	TNRC6A	92	100.000	Procavia_capensis
ENSNLEG00000011851	TNRC6A	98	93.391	ENSPCOG00000010134	TNRC6A	97	93.068	Propithecus_coquereli
ENSNLEG00000011851	TNRC6A	89	69.930	ENSPVAG00000012066	TNRC6A	97	70.516	Pteropus_vampyrus
ENSNLEG00000011851	TNRC6A	98	92.283	ENSRNOG00000024737	Tnrc6a	97	91.908	Rattus_norvegicus
ENSNLEG00000011851	TNRC6A	99	96.594	ENSRBIG00000014222	TNRC6A	99	96.594	Rhinopithecus_bieti
ENSNLEG00000011851	TNRC6A	99	96.253	ENSRROG00000032360	TNRC6A	99	96.253	Rhinopithecus_roxellana
ENSNLEG00000011851	TNRC6A	98	95.450	ENSSBOG00000036197	TNRC6A	100	96.800	Saimiri_boliviensis_boliviensis
ENSNLEG00000011851	TNRC6A	92	83.049	ENSSHAG00000008811	TNRC6A	99	83.333	Sarcophilus_harrisii
ENSNLEG00000011851	TNRC6A	88	64.382	ENSSFOG00015008920	tnrc6a	98	74.089	Scleropages_formosus
ENSNLEG00000011851	TNRC6A	73	80.859	ENSSARG00000002479	TNRC6A	89	80.143	Sorex_araneus
ENSNLEG00000011851	TNRC6A	91	77.184	ENSSPUG00000010525	TNRC6A	100	77.241	Sphenodon_punctatus
ENSNLEG00000011851	TNRC6A	98	94.102	ENSSSCG00000038870	TNRC6A	100	96.152	Sus_scrofa
ENSNLEG00000011851	TNRC6A	98	78.809	ENSTGUG00000006142	TNRC6A	97	79.077	Taeniopygia_guttata
ENSNLEG00000011851	TNRC6A	98	91.796	ENSTBEG00000014965	TNRC6A	99	91.693	Tupaia_belangeri
ENSNLEG00000011851	TNRC6A	92	93.597	ENSTTRG00000002008	TNRC6A	90	93.703	Tursiops_truncatus
ENSNLEG00000011851	TNRC6A	80	94.730	ENSUAMG00000006656	-	93	94.463	Ursus_americanus
ENSNLEG00000011851	TNRC6A	99	93.191	ENSUMAG00000008274	TNRC6A	100	95.911	Ursus_maritimus
ENSNLEG00000011851	TNRC6A	52	97.273	ENSVPAG00000010764	-	52	97.273	Vicugna_pacos
ENSNLEG00000011851	TNRC6A	98	94.244	ENSVVUG00000005380	TNRC6A	99	93.458	Vulpes_vulpes
ENSNLEG00000011851	TNRC6A	95	64.118	ENSXETG00000030437	TNRC6A	99	64.359	Xenopus_tropicalis