EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNLEG00000011928 (Gene tree)
Gene ID
100604028
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Nomascus_leucogenys
Status
putative
Strand
Minus strand
Length
16308 bases
Position
chr12:8864842-8881149
Accession
100604028
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNLEP00000029049PABPPF00658.182.2e-3111
ENSNLEP00000014528PABPPF00658.182.4e-3111
ENSNLEP00000029049RRM_5PF13893.67.6e-0911
ENSNLEP00000014528RRM_5PF13893.68.5e-0911
ENSNLEP00000029049RRM_1PF00076.229.9e-9214
ENSNLEP00000029049RRM_1PF00076.229.9e-9224
ENSNLEP00000029049RRM_1PF00076.229.9e-9234
ENSNLEP00000029049RRM_1PF00076.229.9e-9244
ENSNLEP00000014528RRM_1PF00076.221.1e-9114
ENSNLEP00000014528RRM_1PF00076.221.1e-9124
ENSNLEP00000014528RRM_1PF00076.221.1e-9134
ENSNLEP00000014528RRM_1PF00076.221.1e-9144
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNLET00000015252PABPC4-2013162XM_003273311ENSNLEP00000014528644 (aa)XP_003273359G1RMR4
ENSNLET00000041151PABPC4-2023123XM_003273312ENSNLEP00000029049631 (aa)XP_003273360A0A2I3GCJ7
Gene Model
Click here to download ENSNLEG00000011928's gene model file
Pathways
Pathway IDPathway NameSource
nle03013RNA transportKEGG
nle03015mRNA surveillance pathwayKEGG
nle03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000011928's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNLEG00000011928PABPC45338.889ENSNLEG00000014638CELF17138.636
ENSNLEG00000011928PABPC46030.605ENSNLEG00000001325ELAVL19430.605
ENSNLEG00000011928PABPC46067.416ENSNLEG00000035086PABPC59667.218
ENSNLEG00000011928PABPC45830.952ENSNLEG00000016303ELAVL48930.921
ENSNLEG00000011928PABPC46175.405ENSNLEG00000019300PABPC4L9975.405
ENSNLEG00000011928PABPC45731.395ENSNLEG00000016743TIAL17531.395
ENSNLEG00000011928PABPC45837.500ENSNLEG00000011968CELF25937.500
ENSNLEG00000011928PABPC49978.627ENSNLEG00000003142-9978.471
ENSNLEG00000011928PABPC46654.608ENSNLEG00000034154-9954.608
ENSNLEG00000011928PABPC49953.521ENSNLEG00000030011-9953.521
ENSNLEG00000011928PABPC45931.579ENSNLEG00000016382ELAVL28934.940
ENSNLEG00000011928PABPC49866.539ENSNLEG00000034666-9465.714
ENSNLEG00000011928PABPC49972.784ENSNLEG00000018338PABPC39972.713
ENSNLEG00000011928PABPC45876.650ENSNLEG00000018128-9976.650
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNLEG00000011928PABPC410099.845ENSG00000090621PABPC4100100.000Homo_sapiens
ENSNLEG00000011928PABPC49983.360ENSAPOG00000001161pabpc410082.453Acanthochromis_polyacanthus
ENSNLEG00000011928PABPC49857.717ENSAMEG00000015083-9957.395Ailuropoda_melanoleuca
ENSNLEG00000011928PABPC410096.818ENSAMEG00000011535-10096.818Ailuropoda_melanoleuca
ENSNLEG00000011928PABPC410083.594ENSACIG00000023343pabpc410084.219Amphilophus_citrinellus
ENSNLEG00000011928PABPC49983.518ENSAOCG00000021529pabpc410083.750Amphiprion_ocellaris
ENSNLEG00000011928PABPC49983.518ENSAPEG00000019196pabpc410083.750Amphiprion_percula
ENSNLEG00000011928PABPC49982.622ENSATEG00000007402pabpc410082.426Anabas_testudineus
ENSNLEG00000011928PABPC49991.429ENSAPLG00000009729-10091.429Anas_platyrhynchos
ENSNLEG00000011928PABPC49990.161ENSACAG00000002544PABPC410090.161Anolis_carolinensis
ENSNLEG00000011928PABPC410099.683ENSANAG00000025079PABPC410099.683Aotus_nancymaae
ENSNLEG00000011928PABPC410083.125ENSACLG00000019558pabpc410083.204Astatotilapia_calliptera
ENSNLEG00000011928PABPC49978.922ENSAMXG00000018779pabpc49979.556Astyanax_mexicanus
ENSNLEG00000011928PABPC410099.070ENSBTAG00000017125PABPC410099.070Bos_taurus
ENSNLEG00000011928PABPC45786.826ENSBTAG00000048536-9886.826Bos_taurus
ENSNLEG00000011928PABPC410099.525ENSCJAG00000002512-10099.525Callithrix_jacchus
ENSNLEG00000011928PABPC47790.164ENSCJAG00000045953-9290.123Callithrix_jacchus
ENSNLEG00000011928PABPC410099.366ENSCAFG00000003081PABPC410099.366Canis_familiaris
ENSNLEG00000011928PABPC410096.970ENSCAFG00020004161PABPC410096.970Canis_lupus_dingo
ENSNLEG00000011928PABPC410078.416ENSCHIG00000023385-10078.416Capra_hircus
ENSNLEG00000011928PABPC410096.818ENSCHIG00000019398-10096.818Capra_hircus
ENSNLEG00000011928PABPC410099.525ENSTSYG00000006532PABPC410099.525Carlito_syrichta
ENSNLEG00000011928PABPC49999.523ENSCAPG00000015984PABPC410099.523Cavia_aperea
ENSNLEG00000011928PABPC410099.525ENSCPOG00000009552PABPC410099.525Cavia_porcellus
ENSNLEG00000011928PABPC410099.683ENSCCAG00000037306PABPC410099.683Cebus_capucinus
ENSNLEG00000011928PABPC4100100.000ENSCATG00000042164PABPC4100100.000Cercocebus_atys
ENSNLEG00000011928PABPC410099.208ENSCLAG00000011899PABPC410099.208Chinchilla_lanigera
ENSNLEG00000011928PABPC410097.576ENSCSAG00000001135PABPC410097.576Chlorocebus_sabaeus
ENSNLEG00000011928PABPC48697.625ENSCHOG00000005327PABPC48197.625Choloepus_hoffmanni
ENSNLEG00000011928PABPC49991.746ENSCPBG00000001038PABPC410091.746Chrysemys_picta_bellii
ENSNLEG00000011928PABPC49999.839ENSCANG00000034177PABPC410099.839Colobus_angolensis_palliatus
ENSNLEG00000011928PABPC410095.030ENSCGRG00001018166Pabpc410095.030Cricetulus_griseus_chok1gshd
ENSNLEG00000011928PABPC49997.340ENSCGRG00000009777Pabpc410097.340Cricetulus_griseus_crigri
ENSNLEG00000011928PABPC410082.344ENSCSEG00000000130pabpc410082.426Cynoglossus_semilaevis
ENSNLEG00000011928PABPC49983.625ENSCVAG00000019246pabpc410083.861Cyprinodon_variegatus
ENSNLEG00000011928PABPC49984.921ENSDARG00000059259pabpc410085.691Danio_rerio
ENSNLEG00000011928PABPC49999.643ENSDNOG00000018444-10099.643Dasypus_novemcinctus
ENSNLEG00000011928PABPC410099.534ENSDORG00000011581Pabpc410099.534Dipodomys_ordii
ENSNLEG00000011928PABPC48665.370ENSETEG00000009172-9965.385Echinops_telfairi
ENSNLEG00000011928PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSNLEG00000011928PABPC49776.898ENSEBUG00000013782pabpc49976.108Eptatretus_burgeri
ENSNLEG00000011928PABPC49976.582ENSEBUG00000000992pabpc410075.862Eptatretus_burgeri
ENSNLEG00000011928PABPC410097.424ENSEASG00005014119PABPC410097.424Equus_asinus_asinus
ENSNLEG00000011928PABPC410097.424ENSECAG00000009396PABPC410097.424Equus_caballus
ENSNLEG00000011928PABPC410093.939ENSEEUG00000002962PABPC410093.939Erinaceus_europaeus
ENSNLEG00000011928PABPC49983.599ENSELUG00000003195pabpc49884.177Esox_lucius
ENSNLEG00000011928PABPC410099.366ENSFCAG00000015254-10099.366Felis_catus
ENSNLEG00000011928PABPC49990.952ENSFALG00000000543PABPC410090.952Ficedula_albicollis
ENSNLEG00000011928PABPC410097.121ENSFDAG00000020016-10097.121Fukomys_damarensis
ENSNLEG00000011928PABPC49067.021ENSFDAG00000010581-10062.867Fukomys_damarensis
ENSNLEG00000011928PABPC410083.412ENSFHEG00000007548pabpc49391.031Fundulus_heteroclitus
ENSNLEG00000011928PABPC49982.965ENSGMOG00000019025pabpc49983.596Gadus_morhua
ENSNLEG00000011928PABPC49991.746ENSGALG00000003800PABPC410091.746Gallus_gallus
ENSNLEG00000011928PABPC49990.566ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSNLEG00000011928PABPC410081.591ENSGACG00000007179pabpc410082.215Gasterosteus_aculeatus
ENSNLEG00000011928PABPC49991.587ENSGAGG00000001888PABPC410091.587Gopherus_agassizii
ENSNLEG00000011928PABPC410099.842ENSGGOG00000004002PABPC410099.842Gorilla_gorilla
ENSNLEG00000011928PABPC410083.281ENSHBUG00000020206pabpc410083.359Haplochromis_burtoni
ENSNLEG00000011928PABPC410099.689ENSHGLG00000011162PABPC410099.689Heterocephalus_glaber_female
ENSNLEG00000011928PABPC410099.689ENSHGLG00100001580PABPC410099.689Heterocephalus_glaber_male
ENSNLEG00000011928PABPC410082.316ENSHCOG00000012694pabpc410082.942Hippocampus_comes
ENSNLEG00000011928PABPC49883.146ENSIPUG00000016620pabpc49983.176Ictalurus_punctatus
ENSNLEG00000011928PABPC410099.534ENSSTOG00000010416PABPC410099.534Ictidomys_tridecemlineatus
ENSNLEG00000011928PABPC410097.205ENSJJAG00000007781Pabpc410097.205Jaculus_jaculus
ENSNLEG00000011928PABPC49982.677ENSKMAG00000013597pabpc49982.188Kryptolebias_marmoratus
ENSNLEG00000011928PABPC410082.582ENSLBEG00000013654pabpc410082.143Labrus_bergylta
ENSNLEG00000011928PABPC49988.170ENSLACG00000011907PABPC410088.170Latimeria_chalumnae
ENSNLEG00000011928PABPC49985.512ENSLOCG00000001877pabpc49986.299Lepisosteus_oculatus
ENSNLEG00000011928PABPC410096.970ENSLAFG00000000151PABPC410096.970Loxodonta_africana
ENSNLEG00000011928PABPC4100100.000ENSMFAG00000041481PABPC4100100.000Macaca_fascicularis
ENSNLEG00000011928PABPC410097.576ENSMMUG00000007497PABPC410097.576Macaca_mulatta
ENSNLEG00000011928PABPC410099.842ENSMNEG00000043054PABPC410099.842Macaca_nemestrina
ENSNLEG00000011928PABPC4100100.000ENSMLEG00000040716PABPC4100100.000Mandrillus_leucophaeus
ENSNLEG00000011928PABPC49983.201ENSMAMG00000010025pabpc49982.059Mastacembelus_armatus
ENSNLEG00000011928PABPC410082.969ENSMZEG00005006141pabpc410083.048Maylandia_zebra
ENSNLEG00000011928PABPC49987.905ENSMGAG00000005408PABPC410087.905Meleagris_gallopavo
ENSNLEG00000011928PABPC45781.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSNLEG00000011928PABPC47289.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSNLEG00000011928PABPC47795.413ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSNLEG00000011928PABPC48998.087ENSMICG00000016633-10098.087Microcebus_murinus
ENSNLEG00000011928PABPC49984.725ENSMICG00000036729-10085.435Microcebus_murinus
ENSNLEG00000011928PABPC410097.795ENSMOCG00000006763Pabpc410097.795Microtus_ochrogaster
ENSNLEG00000011928PABPC410080.346ENSMMOG00000002363pabpc49979.538Mola_mola
ENSNLEG00000011928PABPC45974.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSNLEG00000011928PABPC49888.509ENSMODG00000017657-10088.110Monodelphis_domestica
ENSNLEG00000011928PABPC49982.780ENSMALG00000011017pabpc410082.326Monopterus_albus
ENSNLEG00000011928PABPC410095.303MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSNLEG00000011928PABPC49984.456MGP_CAROLIEiJ_G0024864-10084.870Mus_caroli
ENSNLEG00000011928PABPC410098.137ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSNLEG00000011928PABPC49995.392MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSNLEG00000011928PABPC49976.523MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSNLEG00000011928PABPC410097.121ENSMPUG00000014414-10097.121Mustela_putorius_furo
ENSNLEG00000011928PABPC49553.808ENSMPUG00000006836-10053.642Mustela_putorius_furo
ENSNLEG00000011928PABPC410096.672ENSMLUG00000012068PABPC410096.672Myotis_lucifugus
ENSNLEG00000011928PABPC410099.379ENSNGAG00000018292Pabpc410099.379Nannospalax_galili
ENSNLEG00000011928PABPC45992.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSNLEG00000011928PABPC46786.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSNLEG00000011928PABPC48598.737ENSOPRG00000011984PABPC48798.737Ochotona_princeps
ENSNLEG00000011928PABPC410098.574ENSODEG00000006592-10098.574Octodon_degus
ENSNLEG00000011928PABPC45385.714ENSODEG00000013457-10085.714Octodon_degus
ENSNLEG00000011928PABPC49987.789ENSODEG00000017434-10087.764Octodon_degus
ENSNLEG00000011928PABPC410083.281ENSONIG00000008176pabpc410083.906Oreochromis_niloticus
ENSNLEG00000011928PABPC49991.429ENSOANG00000010001PABPC410091.429Ornithorhynchus_anatinus
ENSNLEG00000011928PABPC49696.835ENSOCUG00000000562PABPC48896.835Oryctolagus_cuniculus
ENSNLEG00000011928PABPC49991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSNLEG00000011928PABPC49991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSNLEG00000011928PABPC49991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSNLEG00000011928PABPC49983.201ENSOMEG00000014410pabpc49983.648Oryzias_melastigma
ENSNLEG00000011928PABPC410099.382ENSOGAG00000004067PABPC410099.382Otolemur_garnettii
ENSNLEG00000011928PABPC410096.818ENSOARG00000020060PABPC410096.818Ovis_aries
ENSNLEG00000011928PABPC410099.842ENSPPAG00000043625PABPC410099.842Pan_paniscus
ENSNLEG00000011928PABPC410099.366ENSPPRG00000024727PABPC410099.366Panthera_pardus
ENSNLEG00000011928PABPC410099.366ENSPTIG00000005829PABPC410099.366Panthera_tigris_altaica
ENSNLEG00000011928PABPC410099.842ENSPTRG00000000573PABPC410099.842Pan_troglodytes
ENSNLEG00000011928PABPC410099.842ENSPANG00000009484PABPC410099.842Papio_anubis
ENSNLEG00000011928PABPC49984.810ENSPKIG00000025356pabpc49985.443Paramormyrops_kingsleyae
ENSNLEG00000011928PABPC49991.746ENSPSIG00000016892PABPC410091.746Pelodiscus_sinensis
ENSNLEG00000011928PABPC410081.732ENSPMGG00000009073pabpc49981.476Periophthalmus_magnuspinnatus
ENSNLEG00000011928PABPC410097.306ENSPEMG00000023569-9997.306Peromyscus_maniculatus_bairdii
ENSNLEG00000011928PABPC410093.478ENSPEMG00000024193-9993.478Peromyscus_maniculatus_bairdii
ENSNLEG00000011928PABPC49571.311ENSPMAG00000007885pabpc410069.822Petromyzon_marinus
ENSNLEG00000011928PABPC48973.484ENSPMAG00000002836pabpc410073.196Petromyzon_marinus
ENSNLEG00000011928PABPC49894.033ENSPCIG00000020674PABPC410093.810Phascolarctos_cinereus
ENSNLEG00000011928PABPC410082.786ENSPFOG00000002682pabpc410082.919Poecilia_formosa
ENSNLEG00000011928PABPC410082.629ENSPLAG00000010112pabpc410083.333Poecilia_latipinna
ENSNLEG00000011928PABPC49983.307ENSPMEG00000019739pabpc410083.075Poecilia_mexicana
ENSNLEG00000011928PABPC410083.099ENSPREG00000001589pabpc410083.333Poecilia_reticulata
ENSNLEG00000011928PABPC410097.424ENSPPYG00000001506PABPC410097.424Pongo_abelii
ENSNLEG00000011928PABPC410092.121ENSPCAG00000003341PABPC410092.121Procavia_capensis
ENSNLEG00000011928PABPC410099.684ENSPCOG00000023725-10099.684Propithecus_coquereli
ENSNLEG00000011928PABPC49979.966ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSNLEG00000011928PABPC49996.303ENSPVAG00000002187PABPC410096.303Pteropus_vampyrus
ENSNLEG00000011928PABPC410083.125ENSPNYG00000006134pabpc410083.204Pundamilia_nyererei
ENSNLEG00000011928PABPC410083.412ENSPNAG00000024355pabpc410084.038Pygocentrus_nattereri
ENSNLEG00000011928PABPC410098.137ENSRNOG00000015642Pabpc410098.137Rattus_norvegicus
ENSNLEG00000011928PABPC410095.963ENSRNOG00000028592AABR07035074.110095.963Rattus_norvegicus
ENSNLEG00000011928PABPC4100100.000ENSRBIG00000039761PABPC4100100.000Rhinopithecus_bieti
ENSNLEG00000011928PABPC4100100.000ENSRROG00000033355PABPC4100100.000Rhinopithecus_roxellana
ENSNLEG00000011928PABPC410099.525ENSSBOG00000026193PABPC410099.525Saimiri_boliviensis_boliviensis
ENSNLEG00000011928PABPC49892.718ENSSHAG00000018139PABPC410092.222Sarcophilus_harrisii
ENSNLEG00000011928PABPC49985.714ENSSFOG00015023514pabpc49985.714Scleropages_formosus
ENSNLEG00000011928PABPC49982.753ENSSMAG00000009007pabpc49982.104Scophthalmus_maximus
ENSNLEG00000011928PABPC49988.046ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSNLEG00000011928PABPC49985.588ENSSLDG00000013025pabpc410082.969Seriola_lalandi_dorsalis
ENSNLEG00000011928PABPC410089.848ENSSARG00000000310PABPC410089.848Sorex_araneus
ENSNLEG00000011928PABPC49990.000ENSSPUG00000003204PABPC410090.000Sphenodon_punctatus
ENSNLEG00000011928PABPC49990.562ENSSPAG00000009252pabpc49990.359Stegastes_partitus
ENSNLEG00000011928PABPC410099.208ENSSSCG00000003660-10099.208Sus_scrofa
ENSNLEG00000011928PABPC48951.730ENSSSCG00000036170-9651.730Sus_scrofa
ENSNLEG00000011928PABPC49986.536ENSTGUG00000001266PABPC410086.536Taeniopygia_guttata
ENSNLEG00000011928PABPC410082.075ENSTRUG00000005907pabpc49982.003Takifugu_rubripes
ENSNLEG00000011928PABPC410078.213ENSTNIG00000016902pabpc49978.213Tetraodon_nigroviridis
ENSNLEG00000011928PABPC49985.882ENSTBEG00000009035PABPC410085.882Tupaia_belangeri
ENSNLEG00000011928PABPC49980.460ENSTTRG00000014340PABPC410084.538Tursiops_truncatus
ENSNLEG00000011928PABPC410099.208ENSUAMG00000000303PABPC410099.208Ursus_americanus
ENSNLEG00000011928PABPC49999.107ENSUMAG00000019585PABPC410099.107Ursus_maritimus
ENSNLEG00000011928PABPC48396.429ENSVPAG00000010041PABPC47796.429Vicugna_pacos
ENSNLEG00000011928PABPC410099.366ENSVVUG00000005215PABPC410099.366Vulpes_vulpes
ENSNLEG00000011928PABPC49983.492ENSXETG00000010946pabpc410083.492Xenopus_tropicalis
ENSNLEG00000011928PABPC45997.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSNLEG00000011928PABPC49989.351ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSNLEG00000011928PABPC410082.942ENSXMAG00000019007pabpc410083.178Xiphophorus_maculatus

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