EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000012028 (Gene tree)
Gene ID: 100600191
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 83243 bases
Position: chr3:47635021-47718263
Accession: 100600191
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000014637	DND1_DSRM	PF14709.7	1.5e-24	1	1
ENSNLEP00000033488	DND1_DSRM	PF14709.7	3e-21	1	1
ENSNLEP00000014637	RRM_1	PF00076.22	9.6e-40	1	3
ENSNLEP00000014637	RRM_1	PF00076.22	9.6e-40	2	3
ENSNLEP00000014637	RRM_1	PF00076.22	9.6e-40	3	3
ENSNLEP00000033488	RRM_1	PF00076.22	1e-39	1	3
ENSNLEP00000033488	RRM_1	PF00076.22	1e-39	2	3
ENSNLEP00000033488	RRM_1	PF00076.22	1e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000043761	A1CF-202	1779	-	ENSNLEP00000033488	592 (aa)	-	A0A2I3GQ69
ENSNLET00000015369	A1CF-201	2181	XM_003255157	ENSNLEP00000014637	595 (aa)	XP_003255205	G1RN23

Gene Model

Click here to download ENSNLEG00000012028's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000012028's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000012028	A1CF	51	52.427	ENSNLEG00000012879	-	70	44.764
ENSNLEG00000012028	A1CF	74	58.628	ENSNLEG00000017151	RBM47	87	68.588
ENSNLEG00000012028	A1CF	86	72.333	ENSNLEG00000006184	RBM46	96	72.333
ENSNLEG00000012028	A1CF	53	52.215	ENSNLEG00000008411	HNRNPR	53	52.215

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000012028	A1CF	100	98.992	ENSG00000148584	A1CF	100	99.502	Homo_sapiens
ENSNLEG00000012028	A1CF	100	73.632	ENSAPOG00000008259	a1cf	100	73.466	Acanthochromis_polyacanthus
ENSNLEG00000012028	A1CF	100	96.303	ENSAMEG00000000523	A1CF	100	96.303	Ailuropoda_melanoleuca
ENSNLEG00000012028	A1CF	100	75.693	ENSACIG00000008632	a1cf	100	76.998	Amphilophus_citrinellus
ENSNLEG00000012028	A1CF	100	74.304	ENSAOCG00000023744	a1cf	96	84.638	Amphiprion_ocellaris
ENSNLEG00000012028	A1CF	100	75.286	ENSAPEG00000009537	a1cf	100	75.941	Amphiprion_percula
ENSNLEG00000012028	A1CF	100	76.059	ENSATEG00000013720	a1cf	100	77.362	Anabas_testudineus
ENSNLEG00000012028	A1CF	100	89.094	ENSAPLG00000002964	A1CF	100	89.094	Anas_platyrhynchos
ENSNLEG00000012028	A1CF	100	83.221	ENSACAG00000015269	A1CF	100	83.054	Anolis_carolinensis
ENSNLEG00000012028	A1CF	100	97.815	ENSANAG00000019974	A1CF	100	97.815	Aotus_nancymaae
ENSNLEG00000012028	A1CF	100	73.366	ENSACLG00000017428	a1cf	100	75.163	Astatotilapia_calliptera
ENSNLEG00000012028	A1CF	100	75.041	ENSAMXG00000018180	a1cf	100	75.372	Astyanax_mexicanus
ENSNLEG00000012028	A1CF	100	95.126	ENSBTAG00000021195	A1CF	100	95.788	Bos_taurus
ENSNLEG00000012028	A1CF	100	99.496	ENSCJAG00000005045	A1CF	100	99.496	Callithrix_jacchus
ENSNLEG00000012028	A1CF	100	96.303	ENSCAFG00000015581	A1CF	100	96.303	Canis_familiaris
ENSNLEG00000012028	A1CF	100	96.303	ENSCAFG00020026421	A1CF	100	96.303	Canis_lupus_dingo
ENSNLEG00000012028	A1CF	100	95.966	ENSCHIG00000020411	A1CF	100	95.966	Capra_hircus
ENSNLEG00000012028	A1CF	95	97.518	ENSTSYG00000001755	A1CF	100	96.441	Carlito_syrichta
ENSNLEG00000012028	A1CF	88	96.694	ENSCAPG00000017386	A1CF	89	96.694	Cavia_aperea
ENSNLEG00000012028	A1CF	100	96.975	ENSCPOG00000009807	A1CF	100	96.975	Cavia_porcellus
ENSNLEG00000012028	A1CF	100	98.992	ENSCCAG00000018168	A1CF	100	98.992	Cebus_capucinus
ENSNLEG00000012028	A1CF	100	97.479	ENSCATG00000043715	A1CF	100	97.479	Cercocebus_atys
ENSNLEG00000012028	A1CF	100	96.812	ENSCLAG00000010424	A1CF	100	96.812	Chinchilla_lanigera
ENSNLEG00000012028	A1CF	100	98.824	ENSCSAG00000007032	A1CF	100	98.824	Chlorocebus_sabaeus
ENSNLEG00000012028	A1CF	98	90.339	ENSCHOG00000009089	A1CF	98	90.508	Choloepus_hoffmanni
ENSNLEG00000012028	A1CF	100	88.758	ENSCPBG00000026464	A1CF	100	88.591	Chrysemys_picta_bellii
ENSNLEG00000012028	A1CF	100	98.824	ENSCANG00000038032	A1CF	100	98.824	Colobus_angolensis_palliatus
ENSNLEG00000012028	A1CF	100	94.958	ENSCGRG00001017413	A1cf	100	94.958	Cricetulus_griseus_chok1gshd
ENSNLEG00000012028	A1CF	100	94.286	ENSCGRG00000017332	A1cf	100	94.286	Cricetulus_griseus_crigri
ENSNLEG00000012028	A1CF	100	75.290	ENSCSEG00000002361	a1cf	100	76.617	Cynoglossus_semilaevis
ENSNLEG00000012028	A1CF	100	75.081	ENSCVAG00000010520	a1cf	100	76.547	Cyprinodon_variegatus
ENSNLEG00000012028	A1CF	100	78.037	ENSDARG00000002968	a1cf	100	79.534	Danio_rerio
ENSNLEG00000012028	A1CF	100	95.798	ENSDNOG00000002829	A1CF	100	95.798	Dasypus_novemcinctus
ENSNLEG00000012028	A1CF	81	96.169	ENSETEG00000012527	A1CF	79	96.169	Echinops_telfairi
ENSNLEG00000012028	A1CF	100	97.655	ENSEASG00005012924	A1CF	100	97.655	Equus_asinus_asinus
ENSNLEG00000012028	A1CF	100	97.152	ENSECAG00000010424	A1CF	100	97.152	Equus_caballus
ENSNLEG00000012028	A1CF	81	78.914	ENSEEUG00000000013	A1CF	97	81.858	Erinaceus_europaeus
ENSNLEG00000012028	A1CF	100	78.869	ENSELUG00000003159	a1cf	100	79.700	Esox_lucius
ENSNLEG00000012028	A1CF	100	92.941	ENSFCAG00000011179	A1CF	100	93.613	Felis_catus
ENSNLEG00000012028	A1CF	100	86.409	ENSFALG00000013183	A1CF	100	86.242	Ficedula_albicollis
ENSNLEG00000012028	A1CF	100	94.958	ENSFDAG00000019371	A1CF	100	94.958	Fukomys_damarensis
ENSNLEG00000012028	A1CF	100	70.358	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSNLEG00000012028	A1CF	100	72.277	ENSGMOG00000018943	a1cf	100	72.277	Gadus_morhua
ENSNLEG00000012028	A1CF	99	84.874	ENSGALG00000003765	A1CF	97	88.319	Gallus_gallus
ENSNLEG00000012028	A1CF	100	70.230	ENSGAFG00000014868	a1cf	100	71.217	Gambusia_affinis
ENSNLEG00000012028	A1CF	100	74.342	ENSGACG00000010241	a1cf	100	74.836	Gasterosteus_aculeatus
ENSNLEG00000012028	A1CF	99	85.254	ENSGAGG00000016508	A1CF	97	88.455	Gopherus_agassizii
ENSNLEG00000012028	A1CF	100	99.160	ENSGGOG00000009670	A1CF	100	99.160	Gorilla_gorilla
ENSNLEG00000012028	A1CF	100	74.715	ENSHBUG00000021959	a1cf	100	76.672	Haplochromis_burtoni
ENSNLEG00000012028	A1CF	100	96.975	ENSHGLG00000008955	A1CF	100	96.975	Heterocephalus_glaber_female
ENSNLEG00000012028	A1CF	100	96.303	ENSHGLG00100000518	A1CF	100	96.303	Heterocephalus_glaber_male
ENSNLEG00000012028	A1CF	100	70.033	ENSHCOG00000017669	a1cf	100	72.683	Hippocampus_comes
ENSNLEG00000012028	A1CF	89	83.396	ENSIPUG00000010367	a1cf	96	83.396	Ictalurus_punctatus
ENSNLEG00000012028	A1CF	100	77.236	ENSKMAG00000006568	a1cf	100	78.049	Kryptolebias_marmoratus
ENSNLEG00000012028	A1CF	99	75.530	ENSLBEG00000020994	a1cf	98	77.011	Labrus_bergylta
ENSNLEG00000012028	A1CF	100	81.636	ENSLACG00000008061	A1CF	100	81.469	Latimeria_chalumnae
ENSNLEG00000012028	A1CF	100	82.333	ENSLOCG00000006302	a1cf	100	82.333	Lepisosteus_oculatus
ENSNLEG00000012028	A1CF	100	95.126	ENSLAFG00000015462	A1CF	100	95.126	Loxodonta_africana
ENSNLEG00000012028	A1CF	100	97.815	ENSMFAG00000035948	A1CF	100	97.815	Macaca_fascicularis
ENSNLEG00000012028	A1CF	100	97.815	ENSMMUG00000007077	A1CF	100	97.815	Macaca_mulatta
ENSNLEG00000012028	A1CF	100	97.479	ENSMNEG00000031454	A1CF	100	97.479	Macaca_nemestrina
ENSNLEG00000012028	A1CF	100	98.824	ENSMLEG00000037223	A1CF	100	98.824	Mandrillus_leucophaeus
ENSNLEG00000012028	A1CF	100	74.141	ENSMAMG00000010402	a1cf	100	76.307	Mastacembelus_armatus
ENSNLEG00000012028	A1CF	100	75.833	ENSMZEG00005013245	a1cf	100	76.833	Maylandia_zebra
ENSNLEG00000012028	A1CF	100	88.610	ENSMGAG00000001507	A1CF	100	88.442	Meleagris_gallopavo
ENSNLEG00000012028	A1CF	100	94.454	ENSMAUG00000007422	A1cf	100	94.454	Mesocricetus_auratus
ENSNLEG00000012028	A1CF	100	95.819	ENSMICG00000003377	A1CF	100	95.819	Microcebus_murinus
ENSNLEG00000012028	A1CF	100	94.622	ENSMOCG00000021536	A1cf	100	94.622	Microtus_ochrogaster
ENSNLEG00000012028	A1CF	100	67.267	ENSMMOG00000009422	a1cf	100	69.231	Mola_mola
ENSNLEG00000012028	A1CF	92	90.311	ENSMODG00000016478	A1CF	97	91.304	Monodelphis_domestica
ENSNLEG00000012028	A1CF	100	71.833	ENSMALG00000012992	a1cf	100	71.833	Monopterus_albus
ENSNLEG00000012028	A1CF	100	94.118	MGP_CAROLIEiJ_G0022873	A1cf	100	94.118	Mus_caroli
ENSNLEG00000012028	A1CF	100	94.118	ENSMUSG00000052595	A1cf	99	96.316	Mus_musculus
ENSNLEG00000012028	A1CF	100	93.277	MGP_PahariEiJ_G0014366	A1cf	100	93.277	Mus_pahari
ENSNLEG00000012028	A1CF	100	93.613	MGP_SPRETEiJ_G0023792	A1cf	100	93.613	Mus_spretus
ENSNLEG00000012028	A1CF	100	90.588	ENSMPUG00000016971	A1CF	100	90.588	Mustela_putorius_furo
ENSNLEG00000012028	A1CF	100	95.294	ENSMLUG00000016071	A1CF	100	95.294	Myotis_lucifugus
ENSNLEG00000012028	A1CF	100	95.630	ENSNGAG00000015136	A1cf	100	95.630	Nannospalax_galili
ENSNLEG00000012028	A1CF	100	75.041	ENSNBRG00000001712	a1cf	100	76.998	Neolamprologus_brichardi
ENSNLEG00000012028	A1CF	97	88.000	ENSMEUG00000015909	A1CF	100	89.698	Notamacropus_eugenii
ENSNLEG00000012028	A1CF	88	85.714	ENSOPRG00000010667	A1CF	97	85.849	Ochotona_princeps
ENSNLEG00000012028	A1CF	100	75.367	ENSONIG00000019105	a1cf	100	76.509	Oreochromis_niloticus
ENSNLEG00000012028	A1CF	78	89.079	ENSOANG00000007360	A1CF	99	89.079	Ornithorhynchus_anatinus
ENSNLEG00000012028	A1CF	100	95.134	ENSOCUG00000011587	A1CF	100	95.134	Oryctolagus_cuniculus
ENSNLEG00000012028	A1CF	100	73.948	ENSORLG00000013342	a1cf	100	73.948	Oryzias_latipes
ENSNLEG00000012028	A1CF	100	75.367	ENSORLG00020000586	a1cf	100	75.733	Oryzias_latipes_hni
ENSNLEG00000012028	A1CF	100	75.204	ENSORLG00015018569	a1cf	100	75.570	Oryzias_latipes_hsok
ENSNLEG00000012028	A1CF	100	75.123	ENSOMEG00000013531	a1cf	100	74.959	Oryzias_melastigma
ENSNLEG00000012028	A1CF	100	96.303	ENSOGAG00000012884	A1CF	100	96.303	Otolemur_garnettii
ENSNLEG00000012028	A1CF	100	95.966	ENSOARG00000013695	A1CF	100	95.966	Ovis_aries
ENSNLEG00000012028	A1CF	97	97.227	ENSPPAG00000028115	A1CF	100	99.393	Pan_paniscus
ENSNLEG00000012028	A1CF	100	94.622	ENSPPRG00000012180	A1CF	100	95.294	Panthera_pardus
ENSNLEG00000012028	A1CF	100	94.622	ENSPTIG00000021223	A1CF	100	95.294	Panthera_tigris_altaica
ENSNLEG00000012028	A1CF	100	98.992	ENSPTRG00000002508	A1CF	100	98.992	Pan_troglodytes
ENSNLEG00000012028	A1CF	100	97.815	ENSPANG00000021988	A1CF	100	97.815	Papio_anubis
ENSNLEG00000012028	A1CF	100	80.532	ENSPKIG00000025176	a1cf	100	80.532	Paramormyrops_kingsleyae
ENSNLEG00000012028	A1CF	100	87.248	ENSPSIG00000010318	A1CF	100	87.081	Pelodiscus_sinensis
ENSNLEG00000012028	A1CF	88	71.238	ENSPMGG00000013359	a1cf	99	67.235	Periophthalmus_magnuspinnatus
ENSNLEG00000012028	A1CF	100	95.126	ENSPEMG00000015021	A1cf	100	95.126	Peromyscus_maniculatus_bairdii
ENSNLEG00000012028	A1CF	100	89.765	ENSPCIG00000002175	A1CF	100	89.597	Phascolarctos_cinereus
ENSNLEG00000012028	A1CF	100	76.384	ENSPFOG00000007437	-	100	77.850	Poecilia_formosa
ENSNLEG00000012028	A1CF	100	76.547	ENSPFOG00000006683	a1cf	100	78.013	Poecilia_formosa
ENSNLEG00000012028	A1CF	100	75.244	ENSPLAG00000001210	-	100	76.710	Poecilia_latipinna
ENSNLEG00000012028	A1CF	100	75.244	ENSPLAG00000000026	a1cf	100	76.710	Poecilia_latipinna
ENSNLEG00000012028	A1CF	100	67.810	ENSPMEG00000000921	a1cf	100	69.281	Poecilia_mexicana
ENSNLEG00000012028	A1CF	100	68.954	ENSPMEG00000015529	-	100	70.425	Poecilia_mexicana
ENSNLEG00000012028	A1CF	100	76.059	ENSPREG00000016298	a1cf	100	77.524	Poecilia_reticulata
ENSNLEG00000012028	A1CF	100	98.487	ENSPPYG00000002819	A1CF	100	98.487	Pongo_abelii
ENSNLEG00000012028	A1CF	71	91.837	ENSPCAG00000006463	A1CF	70	91.837	Procavia_capensis
ENSNLEG00000012028	A1CF	100	97.483	ENSPCOG00000024172	A1CF	100	97.483	Propithecus_coquereli
ENSNLEG00000012028	A1CF	100	76.020	ENSPNYG00000017944	a1cf	100	77.977	Pundamilia_nyererei
ENSNLEG00000012028	A1CF	100	80.298	ENSPNAG00000007704	a1cf	100	80.298	Pygocentrus_nattereri
ENSNLEG00000012028	A1CF	100	93.109	ENSRNOG00000033195	A1cf	100	93.109	Rattus_norvegicus
ENSNLEG00000012028	A1CF	100	92.462	ENSRBIG00000042892	A1CF	100	96.282	Rhinopithecus_bieti
ENSNLEG00000012028	A1CF	100	99.160	ENSRROG00000041398	A1CF	100	99.160	Rhinopithecus_roxellana
ENSNLEG00000012028	A1CF	100	99.328	ENSSBOG00000021930	A1CF	100	99.328	Saimiri_boliviensis_boliviensis
ENSNLEG00000012028	A1CF	100	90.101	ENSSHAG00000005096	A1CF	100	89.933	Sarcophilus_harrisii
ENSNLEG00000012028	A1CF	100	79.436	ENSSFOG00015011774	a1cf	100	79.436	Scleropages_formosus
ENSNLEG00000012028	A1CF	100	75.733	ENSSMAG00000013271	a1cf	100	76.059	Scophthalmus_maximus
ENSNLEG00000012028	A1CF	100	76.451	ENSSDUG00000013930	a1cf	100	77.446	Seriola_dumerili
ENSNLEG00000012028	A1CF	100	69.802	ENSSLDG00000004290	a1cf	100	70.462	Seriola_lalandi_dorsalis
ENSNLEG00000012028	A1CF	98	82.872	ENSSARG00000005940	A1CF	96	84.806	Sorex_araneus
ENSNLEG00000012028	A1CF	100	84.680	ENSSPUG00000006797	A1CF	95	87.346	Sphenodon_punctatus
ENSNLEG00000012028	A1CF	100	96.471	ENSSSCG00000010431	A1CF	100	96.471	Sus_scrofa
ENSNLEG00000012028	A1CF	100	87.793	ENSTGUG00000005090	A1CF	100	87.625	Taeniopygia_guttata
ENSNLEG00000012028	A1CF	100	75.041	ENSTRUG00000001982	a1cf	100	75.041	Takifugu_rubripes
ENSNLEG00000012028	A1CF	100	75.285	ENSTNIG00000003580	a1cf	100	75.285	Tetraodon_nigroviridis
ENSNLEG00000012028	A1CF	97	88.215	ENSTTRG00000013190	A1CF	100	84.502	Tursiops_truncatus
ENSNLEG00000012028	A1CF	100	94.958	ENSUAMG00000020065	A1CF	100	94.958	Ursus_americanus
ENSNLEG00000012028	A1CF	100	95.798	ENSUMAG00000011162	A1CF	100	95.798	Ursus_maritimus
ENSNLEG00000012028	A1CF	87	90.019	ENSVPAG00000006130	A1CF	86	90.019	Vicugna_pacos
ENSNLEG00000012028	A1CF	100	94.790	ENSVVUG00000002504	A1CF	100	94.790	Vulpes_vulpes
ENSNLEG00000012028	A1CF	100	78.833	ENSXETG00000006611	a1cf	100	78.667	Xenopus_tropicalis
ENSNLEG00000012028	A1CF	100	76.557	ENSXCOG00000003302	a1cf	100	77.541	Xiphophorus_couchianus
ENSNLEG00000012028	A1CF	100	77.705	ENSXMAG00000016703	a1cf	100	78.689	Xiphophorus_maculatus