EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000012087 (Gene tree)
Gene ID: 100596873
Gene Symbol: BLM
Alias: BS|RECQ2|RECQL3
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 70421 bases
Position: chr6:109889474-109959894
Accession: 100596873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000014738	HRDC	PF00570.23	8.7e-12	1	1
ENSNLEP00000042564	BDHCT	PF08072.11	4e-21	1	1
ENSNLEP00000014738	BDHCT	PF08072.11	4.6e-21	1	1
ENSNLEP00000027314	BDHCT	PF08072.11	2.5e-18	1	1
ENSNLEP00000027314	DEAD	PF00270.29	2.5e-13	1	2
ENSNLEP00000027314	DEAD	PF00270.29	2.5e-13	2	2
ENSNLEP00000042564	DEAD	PF00270.29	3.9e-13	1	2
ENSNLEP00000042564	DEAD	PF00270.29	3.9e-13	2	2
ENSNLEP00000014738	DEAD	PF00270.29	4e-13	1	2
ENSNLEP00000014738	DEAD	PF00270.29	4e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000038763	BLM-202	3807	-	ENSNLEP00000042564	1268 (aa)	-	A0A2I3HG21
ENSNLET00000015478	BLM-201	4200	XM_003268503	ENSNLEP00000014738	1399 (aa)	XP_003268551	G1RNC4
ENSNLET00000038005	BLM-203	3054	-	ENSNLEP00000027314	1017 (aa)	-	A0A2I3G6X6

Gene Model

Click here to download ENSNLEG00000012087's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03440	Homologous recombination	KEGG
nle03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000012087's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000012087	BLM	50	36.499	ENSNLEG00000004797	RECQL	78	36.803

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000012087	BLM	100	97.605	ENSG00000197299	BLM	100	97.605	Homo_sapiens
ENSNLEG00000012087	BLM	99	50.801	ENSAPOG00000017966	blm	77	50.511	Acanthochromis_polyacanthus
ENSNLEG00000012087	BLM	100	82.634	ENSAMEG00000013843	BLM	100	80.239	Ailuropoda_melanoleuca
ENSNLEG00000012087	BLM	74	61.401	ENSACIG00000023762	blm	56	62.708	Amphilophus_citrinellus
ENSNLEG00000012087	BLM	74	61.188	ENSAOCG00000003318	blm	57	61.168	Amphiprion_ocellaris
ENSNLEG00000012087	BLM	74	61.188	ENSAPEG00000018105	blm	56	63.104	Amphiprion_percula
ENSNLEG00000012087	BLM	82	70.287	ENSATEG00000006421	blm	60	63.740	Anabas_testudineus
ENSNLEG00000012087	BLM	99	57.987	ENSAPLG00000006878	BLM	98	56.591	Anas_platyrhynchos
ENSNLEG00000012087	BLM	99	53.994	ENSACAG00000014275	BLM	74	54.354	Anolis_carolinensis
ENSNLEG00000012087	BLM	100	91.320	ENSANAG00000038415	BLM	100	91.037	Aotus_nancymaae
ENSNLEG00000012087	BLM	88	65.993	ENSACLG00000020354	blm	74	50.693	Astatotilapia_calliptera
ENSNLEG00000012087	BLM	99	51.226	ENSAMXG00000016970	blm	81	50.293	Astyanax_mexicanus
ENSNLEG00000012087	BLM	93	82.895	ENSBTAG00000020301	BLM	100	83.389	Bos_taurus
ENSNLEG00000012087	BLM	60	38.144	WBGene00001865	him-6	66	38.724	Caenorhabditis_elegans
ENSNLEG00000012087	BLM	100	91.179	ENSCJAG00000009803	BLM	100	91.037	Callithrix_jacchus
ENSNLEG00000012087	BLM	100	82.967	ENSCAFG00000012385	BLM	100	81.171	Canis_familiaris
ENSNLEG00000012087	BLM	100	82.871	ENSCAFG00020016111	BLM	94	89.330	Canis_lupus_dingo
ENSNLEG00000012087	BLM	100	81.914	ENSCHIG00000010329	BLM	100	81.250	Capra_hircus
ENSNLEG00000012087	BLM	100	87.069	ENSTSYG00000012368	BLM	100	85.271	Carlito_syrichta
ENSNLEG00000012087	BLM	86	82.779	ENSCAPG00000017976	BLM	99	82.779	Cavia_aperea
ENSNLEG00000012087	BLM	100	79.330	ENSCPOG00000001761	BLM	100	76.777	Cavia_porcellus
ENSNLEG00000012087	BLM	100	90.402	ENSCCAG00000023069	BLM	100	90.120	Cebus_capucinus
ENSNLEG00000012087	BLM	100	94.566	ENSCATG00000040609	BLM	100	94.566	Cercocebus_atys
ENSNLEG00000012087	BLM	100	80.556	ENSCLAG00000012111	BLM	100	78.013	Chinchilla_lanigera
ENSNLEG00000012087	BLM	100	93.825	ENSCSAG00000017040	BLM	100	93.825	Chlorocebus_sabaeus
ENSNLEG00000012087	BLM	86	97.101	ENSCHOG00000006255	BLM	80	95.349	Choloepus_hoffmanni
ENSNLEG00000012087	BLM	99	58.387	ENSCPBG00000025000	BLM	97	70.874	Chrysemys_picta_bellii
ENSNLEG00000012087	BLM	55	33.946	ENSCSAVG00000007521	-	99	34.281	Ciona_savignyi
ENSNLEG00000012087	BLM	81	99.441	ENSCANG00000034808	BLM	100	99.444	Colobus_angolensis_palliatus
ENSNLEG00000012087	BLM	100	81.740	ENSCGRG00001024897	Blm	100	77.286	Cricetulus_griseus_chok1gshd
ENSNLEG00000012087	BLM	73	72.508	ENSCGRG00000016261	Blm	97	72.471	Cricetulus_griseus_crigri
ENSNLEG00000012087	BLM	99	51.304	ENSCSEG00000013483	blm	80	51.869	Cynoglossus_semilaevis
ENSNLEG00000012087	BLM	82	70.287	ENSDARG00000077089	blm	63	63.085	Danio_rerio
ENSNLEG00000012087	BLM	99	80.835	ENSDNOG00000010159	BLM	99	79.537	Dasypus_novemcinctus
ENSNLEG00000012087	BLM	100	76.504	ENSDORG00000011033	Blm	100	78.086	Dipodomys_ordii
ENSNLEG00000012087	BLM	84	84.874	ENSETEG00000015019	BLM	77	84.874	Echinops_telfairi
ENSNLEG00000012087	BLM	58	53.794	ENSEBUG00000015743	-	99	50.373	Eptatretus_burgeri
ENSNLEG00000012087	BLM	100	85.742	ENSEASG00005006727	BLM	100	82.161	Equus_asinus_asinus
ENSNLEG00000012087	BLM	100	84.484	ENSECAG00000011405	BLM	100	82.390	Equus_caballus
ENSNLEG00000012087	BLM	99	78.544	ENSEEUG00000001434	BLM	98	72.832	Erinaceus_europaeus
ENSNLEG00000012087	BLM	99	52.801	ENSELUG00000019098	blm	72	52.070	Esox_lucius
ENSNLEG00000012087	BLM	100	83.365	ENSFCAG00000006087	BLM	100	79.930	Felis_catus
ENSNLEG00000012087	BLM	99	55.598	ENSFALG00000010981	BLM	89	53.953	Ficedula_albicollis
ENSNLEG00000012087	BLM	100	74.092	ENSFDAG00000012658	BLM	100	70.848	Fukomys_damarensis
ENSNLEG00000012087	BLM	82	57.652	ENSFHEG00000002553	blm	75	51.610	Fundulus_heteroclitus
ENSNLEG00000012087	BLM	82	68.041	ENSGMOG00000016431	blm	90	58.207	Gadus_morhua
ENSNLEG00000012087	BLM	99	56.801	ENSGALG00000008256	BLM	99	49.932	Gallus_gallus
ENSNLEG00000012087	BLM	74	60.814	ENSGAFG00000001117	blm	63	62.484	Gambusia_affinis
ENSNLEG00000012087	BLM	82	56.997	ENSGACG00000010863	blm	100	69.943	Gasterosteus_aculeatus
ENSNLEG00000012087	BLM	83	61.074	ENSGAGG00000005383	BLM	94	60.435	Gopherus_agassizii
ENSNLEG00000012087	BLM	100	97.006	ENSGGOG00000007710	BLM	100	97.006	Gorilla_gorilla
ENSNLEG00000012087	BLM	80	59.504	ENSHBUG00000015943	blm	60	61.183	Haplochromis_burtoni
ENSNLEG00000012087	BLM	100	81.531	ENSHGLG00000013231	BLM	99	79.577	Heterocephalus_glaber_female
ENSNLEG00000012087	BLM	99	52.612	ENSHCOG00000011455	blm	99	52.751	Hippocampus_comes
ENSNLEG00000012087	BLM	99	51.718	ENSIPUG00000000529	blm	85	52.281	Ictalurus_punctatus
ENSNLEG00000012087	BLM	100	82.759	ENSSTOG00000005000	BLM	100	80.802	Ictidomys_tridecemlineatus
ENSNLEG00000012087	BLM	89	83.228	ENSJJAG00000016322	Blm	94	84.177	Jaculus_jaculus
ENSNLEG00000012087	BLM	99	51.619	ENSKMAG00000016608	blm	75	51.294	Kryptolebias_marmoratus
ENSNLEG00000012087	BLM	61	66.872	ENSLBEG00000018729	blm	61	93.103	Labrus_bergylta
ENSNLEG00000012087	BLM	99	56.059	ENSLACG00000006490	BLM	99	50.571	Latimeria_chalumnae
ENSNLEG00000012087	BLM	99	51.150	ENSLOCG00000014302	blm	76	52.947	Lepisosteus_oculatus
ENSNLEG00000012087	BLM	100	94.495	ENSMFAG00000042982	BLM	100	94.495	Macaca_fascicularis
ENSNLEG00000012087	BLM	100	94.566	ENSMMUG00000019526	BLM	100	94.566	Macaca_mulatta
ENSNLEG00000012087	BLM	100	92.912	ENSMNEG00000031251	BLM	99	90.150	Macaca_nemestrina
ENSNLEG00000012087	BLM	100	94.369	ENSMLEG00000032934	BLM	100	94.369	Mandrillus_leucophaeus
ENSNLEG00000012087	BLM	82	59.075	ENSMAMG00000008726	blm	76	53.056	Mastacembelus_armatus
ENSNLEG00000012087	BLM	87	65.993	ENSMZEG00005022323	blm	64	60.808	Maylandia_zebra
ENSNLEG00000012087	BLM	58	67.282	ENSMGAG00000010473	BLM	99	68.182	Meleagris_gallopavo
ENSNLEG00000012087	BLM	100	81.836	ENSMAUG00000008953	Blm	99	77.037	Mesocricetus_auratus
ENSNLEG00000012087	BLM	100	85.755	ENSMICG00000034442	BLM	100	84.930	Microcebus_murinus
ENSNLEG00000012087	BLM	100	79.732	ENSMOCG00000016367	Blm	99	75.369	Microtus_ochrogaster
ENSNLEG00000012087	BLM	82	57.822	ENSMMOG00000006959	blm	61	62.963	Mola_mola
ENSNLEG00000012087	BLM	99	68.940	ENSMODG00000019449	BLM	99	63.376	Monodelphis_domestica
ENSNLEG00000012087	BLM	80	59.602	ENSMALG00000007323	blm	63	62.791	Monopterus_albus
ENSNLEG00000012087	BLM	100	79.866	MGP_CAROLIEiJ_G0029907	Blm	100	73.371	Mus_caroli
ENSNLEG00000012087	BLM	100	79.429	ENSMUSG00000030528	Blm	100	74.059	Mus_musculus
ENSNLEG00000012087	BLM	100	79.771	MGP_PahariEiJ_G0013129	Blm	100	74.614	Mus_pahari
ENSNLEG00000012087	BLM	100	79.924	MGP_SPRETEiJ_G0031009	Blm	100	74.264	Mus_spretus
ENSNLEG00000012087	BLM	87	78.860	ENSMPUG00000015657	BLM	99	79.122	Mustela_putorius_furo
ENSNLEG00000012087	BLM	100	81.226	ENSMLUG00000014697	BLM	100	79.003	Myotis_lucifugus
ENSNLEG00000012087	BLM	100	83.636	ENSNGAG00000001275	Blm	100	78.576	Nannospalax_galili
ENSNLEG00000012087	BLM	82	71.753	ENSNBRG00000019702	blm	56	63.985	Neolamprologus_brichardi
ENSNLEG00000012087	BLM	99	64.115	ENSMEUG00000007253	BLM	99	59.790	Notamacropus_eugenii
ENSNLEG00000012087	BLM	95	89.352	ENSOPRG00000011667	BLM	95	82.849	Ochotona_princeps
ENSNLEG00000012087	BLM	100	75.000	ENSODEG00000015373	BLM	100	76.679	Octodon_degus
ENSNLEG00000012087	BLM	80	59.316	ENSONIG00000015193	blm	59	61.111	Oreochromis_niloticus
ENSNLEG00000012087	BLM	72	77.662	ENSOANG00000009316	-	99	78.906	Ornithorhynchus_anatinus
ENSNLEG00000012087	BLM	99	76.775	ENSOCUG00000013969	BLM	99	73.291	Oryctolagus_cuniculus
ENSNLEG00000012087	BLM	82	70.082	ENSORLG00000008110	blm	60	63.985	Oryzias_latipes
ENSNLEG00000012087	BLM	82	70.082	ENSORLG00020004812	blm	57	63.985	Oryzias_latipes_hni
ENSNLEG00000012087	BLM	82	70.082	ENSORLG00015018640	blm	78	63.811	Oryzias_latipes_hsok
ENSNLEG00000012087	BLM	74	61.959	ENSOMEG00000023545	blm	60	63.520	Oryzias_melastigma
ENSNLEG00000012087	BLM	100	79.406	ENSOGAG00000005708	BLM	100	77.535	Otolemur_garnettii
ENSNLEG00000012087	BLM	100	80.813	ENSOARG00000012875	BLM	100	79.399	Ovis_aries
ENSNLEG00000012087	BLM	100	96.407	ENSPPAG00000032173	BLM	100	96.407	Pan_paniscus
ENSNLEG00000012087	BLM	100	83.270	ENSPPRG00000002471	BLM	100	79.859	Panthera_pardus
ENSNLEG00000012087	BLM	100	83.302	ENSPTIG00000016168	BLM	100	79.536	Panthera_tigris_altaica
ENSNLEG00000012087	BLM	100	95.836	ENSPTRG00000007460	BLM	100	95.836	Pan_troglodytes
ENSNLEG00000012087	BLM	100	94.778	ENSPANG00000018572	BLM	100	94.778	Papio_anubis
ENSNLEG00000012087	BLM	87	65.688	ENSPKIG00000008954	blm	65	60.900	Paramormyrops_kingsleyae
ENSNLEG00000012087	BLM	55	75.752	ENSPSIG00000009792	BLM	99	77.500	Pelodiscus_sinensis
ENSNLEG00000012087	BLM	70	61.538	ENSPMGG00000006629	blm	81	63.723	Periophthalmus_magnuspinnatus
ENSNLEG00000012087	BLM	100	80.420	ENSPEMG00000017348	Blm	100	75.598	Peromyscus_maniculatus_bairdii
ENSNLEG00000012087	BLM	67	55.370	ENSPMAG00000000445	blm	96	57.063	Petromyzon_marinus
ENSNLEG00000012087	BLM	99	67.345	ENSPCIG00000006609	BLM	99	62.304	Phascolarctos_cinereus
ENSNLEG00000012087	BLM	74	61.470	ENSPFOG00000005059	blm	73	50.797	Poecilia_formosa
ENSNLEG00000012087	BLM	74	61.168	ENSPLAG00000017344	blm	59	62.791	Poecilia_latipinna
ENSNLEG00000012087	BLM	74	61.421	ENSPMEG00000000321	blm	59	62.996	Poecilia_mexicana
ENSNLEG00000012087	BLM	74	60.814	ENSPREG00000007715	blm	56	62.356	Poecilia_reticulata
ENSNLEG00000012087	BLM	100	97.605	ENSPPYG00000006784	BLM	100	94.001	Pongo_abelii
ENSNLEG00000012087	BLM	73	93.939	ENSPCAG00000008960	BLM	73	93.939	Procavia_capensis
ENSNLEG00000012087	BLM	100	82.635	ENSPCOG00000000439	BLM	100	82.635	Propithecus_coquereli
ENSNLEG00000012087	BLM	81	88.818	ENSPVAG00000011642	BLM	88	88.818	Pteropus_vampyrus
ENSNLEG00000012087	BLM	80	51.092	ENSPNYG00000010956	blm	72	44.636	Pundamilia_nyererei
ENSNLEG00000012087	BLM	82	60.092	ENSPNAG00000011714	blm	75	53.091	Pygocentrus_nattereri
ENSNLEG00000012087	BLM	100	79.274	ENSRNOG00000011213	Blm	100	72.906	Rattus_norvegicus
ENSNLEG00000012087	BLM	100	92.814	ENSRBIG00000029656	BLM	100	94.146	Rhinopithecus_bieti
ENSNLEG00000012087	BLM	100	93.578	ENSRROG00000037871	BLM	100	93.578	Rhinopithecus_roxellana
ENSNLEG00000012087	BLM	100	90.280	ENSSBOG00000030957	BLM	100	90.391	Saimiri_boliviensis_boliviensis
ENSNLEG00000012087	BLM	99	69.479	ENSSHAG00000007988	BLM	99	63.352	Sarcophilus_harrisii
ENSNLEG00000012087	BLM	99	50.760	ENSSFOG00015015462	blm	63	62.740	Scleropages_formosus
ENSNLEG00000012087	BLM	74	61.168	ENSSMAG00000001120	blm	84	63.265	Scophthalmus_maximus
ENSNLEG00000012087	BLM	74	61.597	ENSSDUG00000010955	blm	75	50.323	Seriola_dumerili
ENSNLEG00000012087	BLM	99	51.292	ENSSLDG00000000634	blm	76	51.319	Seriola_lalandi_dorsalis
ENSNLEG00000012087	BLM	100	74.521	ENSSARG00000006398	BLM	99	69.017	Sorex_araneus
ENSNLEG00000012087	BLM	99	56.559	ENSSPUG00000000013	BLM	93	57.292	Sphenodon_punctatus
ENSNLEG00000012087	BLM	74	61.947	ENSSPAG00000013999	blm	56	63.659	Stegastes_partitus
ENSNLEG00000012087	BLM	100	82.749	ENSSSCG00000001816	BLM	99	81.719	Sus_scrofa
ENSNLEG00000012087	BLM	99	50.139	ENSTGUG00000009959	-	99	49.396	Taeniopygia_guttata
ENSNLEG00000012087	BLM	99	49.723	ENSTRUG00000019860	blm	76	49.632	Takifugu_rubripes
ENSNLEG00000012087	BLM	82	69.057	ENSTNIG00000019246	blm	70	62.069	Tetraodon_nigroviridis
ENSNLEG00000012087	BLM	78	90.909	ENSTBEG00000006706	BLM	81	84.688	Tupaia_belangeri
ENSNLEG00000012087	BLM	100	84.990	ENSTTRG00000016386	BLM	100	82.746	Tursiops_truncatus
ENSNLEG00000012087	BLM	100	83.174	ENSUMAG00000009105	BLM	97	89.754	Ursus_maritimus
ENSNLEG00000012087	BLM	99	80.574	ENSVPAG00000000085	BLM	99	79.281	Vicugna_pacos
ENSNLEG00000012087	BLM	95	89.862	ENSVVUG00000006402	BLM	100	86.813	Vulpes_vulpes
ENSNLEG00000012087	BLM	99	56.534	ENSXETG00000007847	blm	54	69.923	Xenopus_tropicalis
ENSNLEG00000012087	BLM	74	57.995	ENSXCOG00000020227	blm	55	59.079	Xiphophorus_couchianus
ENSNLEG00000012087	BLM	74	60.737	ENSXMAG00000002951	blm	74	50.515	Xiphophorus_maculatus