EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000012307 (Gene tree)
Gene ID: 100591282
Gene Symbol: RBM28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 30518 bases
Position: chr13:79600536-79631053
Accession: 100591282
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000014966	RRM_1	PF00076.22	3e-57	1	3
ENSNLEP00000014966	RRM_1	PF00076.22	3e-57	2	3
ENSNLEP00000014966	RRM_1	PF00076.22	3e-57	3	3
ENSNLEP00000041392	RRM_1	PF00076.22	1.6e-29	1	2
ENSNLEP00000041392	RRM_1	PF00076.22	1.6e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000015713	RBM28-201	2828	XM_003261292	ENSNLEP00000014966	763 (aa)	XP_003261340	G1RP02
ENSNLET00000038188	RBM28-202	2404	XM_003261293	ENSNLEP00000041392	622 (aa)	XP_003261341	A0A2I3HD14

Gene Model

Click here to download ENSNLEG00000012307's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000012307's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000012307	RBM28	100	100.000	ENSG00000106344	RBM28	100	100.000	Homo_sapiens
ENSNLEG00000012307	RBM28	76	61.538	ENSAPOG00000015512	rbm28	100	51.189	Acanthochromis_polyacanthus
ENSNLEG00000012307	RBM28	100	85.041	ENSAMEG00000004776	RBM28	71	92.391	Ailuropoda_melanoleuca
ENSNLEG00000012307	RBM28	67	54.545	ENSACIG00000023153	rbm28	100	51.434	Amphilophus_citrinellus
ENSNLEG00000012307	RBM28	76	62.500	ENSAOCG00000000462	rbm28	100	51.496	Amphiprion_ocellaris
ENSNLEG00000012307	RBM28	76	62.500	ENSAPEG00000012996	rbm28	100	51.317	Amphiprion_percula
ENSNLEG00000012307	RBM28	78	65.000	ENSATEG00000001672	rbm28	72	65.000	Anabas_testudineus
ENSNLEG00000012307	RBM28	100	100.000	ENSANAG00000033922	RBM28	100	91.361	Aotus_nancymaae
ENSNLEG00000012307	RBM28	100	52.632	ENSACLG00000025024	rbm28	92	54.386	Astatotilapia_calliptera
ENSNLEG00000012307	RBM28	70	58.864	ENSAMXG00000000763	rbm28	99	59.184	Astyanax_mexicanus
ENSNLEG00000012307	RBM28	100	100.000	ENSBTAG00000017001	RBM28	100	100.000	Bos_taurus
ENSNLEG00000012307	RBM28	100	100.000	ENSCJAG00000017731	RBM28	100	90.314	Callithrix_jacchus
ENSNLEG00000012307	RBM28	100	95.000	ENSCAFG00000001667	RBM28	100	83.660	Canis_familiaris
ENSNLEG00000012307	RBM28	100	95.000	ENSCAFG00020021648	RBM28	100	83.660	Canis_lupus_dingo
ENSNLEG00000012307	RBM28	100	100.000	ENSCHIG00000014146	RBM28	100	82.614	Capra_hircus
ENSNLEG00000012307	RBM28	100	95.000	ENSTSYG00000002892	RBM28	100	95.000	Carlito_syrichta
ENSNLEG00000012307	RBM28	84	61.215	ENSCAPG00000013218	RBM28	100	61.682	Cavia_aperea
ENSNLEG00000012307	RBM28	100	95.000	ENSCPOG00000006253	RBM28	100	83.007	Cavia_porcellus
ENSNLEG00000012307	RBM28	100	100.000	ENSCCAG00000035105	RBM28	100	90.969	Cebus_capucinus
ENSNLEG00000012307	RBM28	100	97.500	ENSCATG00000040497	RBM28	100	97.500	Cercocebus_atys
ENSNLEG00000012307	RBM28	100	95.000	ENSCLAG00000003707	RBM28	90	95.000	Chinchilla_lanigera
ENSNLEG00000012307	RBM28	100	100.000	ENSCSAG00000010161	RBM28	100	93.194	Chlorocebus_sabaeus
ENSNLEG00000012307	RBM28	55	100.000	ENSCHOG00000001994	-	51	100.000	Choloepus_hoffmanni
ENSNLEG00000012307	RBM28	65	59.698	ENSCPBG00000018088	RBM28	86	60.345	Chrysemys_picta_bellii
ENSNLEG00000012307	RBM28	72	41.955	ENSCING00000009238	-	58	41.762	Ciona_intestinalis
ENSNLEG00000012307	RBM28	54	43.567	ENSCSAVG00000007149	-	94	43.491	Ciona_savignyi
ENSNLEG00000012307	RBM28	88	100.000	ENSCANG00000038397	RBM28	100	100.000	Colobus_angolensis_palliatus
ENSNLEG00000012307	RBM28	86	100.000	ENSCGRG00001021278	Rbm28	69	100.000	Cricetulus_griseus_chok1gshd
ENSNLEG00000012307	RBM28	100	100.000	ENSCGRG00000005098	Rbm28	82	100.000	Cricetulus_griseus_crigri
ENSNLEG00000012307	RBM28	100	54.545	ENSCSEG00000004212	rbm28	100	48.228	Cynoglossus_semilaevis
ENSNLEG00000012307	RBM28	85	55.507	ENSCVAG00000010493	rbm28	82	65.000	Cyprinodon_variegatus
ENSNLEG00000012307	RBM28	100	50.000	ENSDARG00000025332	rbm28	100	50.746	Danio_rerio
ENSNLEG00000012307	RBM28	100	100.000	ENSDNOG00000001124	RBM28	100	83.660	Dasypus_novemcinctus
ENSNLEG00000012307	RBM28	79	80.242	ENSDORG00000004184	Rbm28	97	80.242	Dipodomys_ordii
ENSNLEG00000012307	RBM28	100	70.519	ENSETEG00000007130	RBM28	99	70.519	Echinops_telfairi
ENSNLEG00000012307	RBM28	82	48.958	ENSEBUG00000004419	rbm28	98	39.687	Eptatretus_burgeri
ENSNLEG00000012307	RBM28	100	97.500	ENSEASG00005008528	RBM28	100	85.267	Equus_asinus_asinus
ENSNLEG00000012307	RBM28	100	97.500	ENSECAG00000007745	RBM28	100	84.896	Equus_caballus
ENSNLEG00000012307	RBM28	100	76.209	ENSEEUG00000002389	RBM28	100	75.817	Erinaceus_europaeus
ENSNLEG00000012307	RBM28	77	62.500	ENSELUG00000020602	rbm28	100	51.945	Esox_lucius
ENSNLEG00000012307	RBM28	100	100.000	ENSFCAG00000000946	RBM28	100	100.000	Felis_catus
ENSNLEG00000012307	RBM28	100	92.500	ENSFDAG00000010169	RBM28	100	84.444	Fukomys_damarensis
ENSNLEG00000012307	RBM28	81	52.283	ENSGMOG00000007091	rbm28	75	50.000	Gadus_morhua
ENSNLEG00000012307	RBM28	70	56.376	ENSGAFG00000004802	rbm28	97	55.211	Gambusia_affinis
ENSNLEG00000012307	RBM28	75	65.714	ENSGACG00000012612	rbm28	71	65.714	Gasterosteus_aculeatus
ENSNLEG00000012307	RBM28	82	70.732	ENSGAGG00000008873	RBM28	80	80.220	Gopherus_agassizii
ENSNLEG00000012307	RBM28	95	96.547	ENSGGOG00000004644	RBM28	97	96.547	Gorilla_gorilla
ENSNLEG00000012307	RBM28	91	51.709	ENSHBUG00000009611	rbm28	63	64.103	Haplochromis_burtoni
ENSNLEG00000012307	RBM28	100	95.000	ENSHGLG00000005409	RBM28	100	83.791	Heterocephalus_glaber_female
ENSNLEG00000012307	RBM28	100	95.000	ENSHGLG00100016458	RBM28	100	83.007	Heterocephalus_glaber_male
ENSNLEG00000012307	RBM28	100	85.509	ENSSTOG00000002169	RBM28	100	85.509	Ictidomys_tridecemlineatus
ENSNLEG00000012307	RBM28	96	97.500	ENSJJAG00000022400	Rbm28	100	75.000	Jaculus_jaculus
ENSNLEG00000012307	RBM28	78	67.500	ENSKMAG00000013348	rbm28	69	67.500	Kryptolebias_marmoratus
ENSNLEG00000012307	RBM28	78	65.000	ENSLBEG00000012998	rbm28	100	49.810	Labrus_bergylta
ENSNLEG00000012307	RBM28	68	76.667	ENSLACG00000010485	-	100	56.119	Latimeria_chalumnae
ENSNLEG00000012307	RBM28	86	70.000	ENSLOCG00000015541	rbm28	80	62.371	Lepisosteus_oculatus
ENSNLEG00000012307	RBM28	100	100.000	ENSLAFG00000010717	RBM28	82	100.000	Loxodonta_africana
ENSNLEG00000012307	RBM28	100	97.500	ENSMFAG00000031036	RBM28	100	97.500	Macaca_fascicularis
ENSNLEG00000012307	RBM28	100	97.500	ENSMMUG00000007250	RBM28	100	97.500	Macaca_mulatta
ENSNLEG00000012307	RBM28	100	97.500	ENSMNEG00000036970	RBM28	100	97.500	Macaca_nemestrina
ENSNLEG00000012307	RBM28	84	93.869	ENSMLEG00000037717	RBM28	100	92.812	Mandrillus_leucophaeus
ENSNLEG00000012307	RBM28	100	62.500	ENSMAMG00000008525	rbm28	100	50.442	Mastacembelus_armatus
ENSNLEG00000012307	RBM28	93	49.113	ENSMZEG00005019625	rbm28	70	52.372	Maylandia_zebra
ENSNLEG00000012307	RBM28	100	100.000	ENSMAUG00000002263	Rbm28	82	100.000	Mesocricetus_auratus
ENSNLEG00000012307	RBM28	94	82.383	ENSMICG00000000107	RBM28	100	84.072	Microcebus_murinus
ENSNLEG00000012307	RBM28	100	100.000	ENSMOCG00000014615	Rbm28	81	100.000	Microtus_ochrogaster
ENSNLEG00000012307	RBM28	70	54.483	ENSMMOG00000008600	rbm28	99	52.510	Mola_mola
ENSNLEG00000012307	RBM28	100	87.500	ENSMODG00000015151	RBM28	100	72.078	Monodelphis_domestica
ENSNLEG00000012307	RBM28	77	65.000	ENSMALG00000006419	rbm28	68	65.000	Monopterus_albus
ENSNLEG00000012307	RBM28	100	97.500	MGP_CAROLIEiJ_G0028162	Rbm28	100	80.026	Mus_caroli
ENSNLEG00000012307	RBM28	100	97.500	ENSMUSG00000029701	Rbm28	100	79.765	Mus_musculus
ENSNLEG00000012307	RBM28	100	97.500	MGP_PahariEiJ_G0021920	Rbm28	100	80.287	Mus_pahari
ENSNLEG00000012307	RBM28	100	97.500	MGP_SPRETEiJ_G0029162	Rbm28	100	80.026	Mus_spretus
ENSNLEG00000012307	RBM28	100	100.000	ENSMPUG00000006511	RBM28	82	100.000	Mustela_putorius_furo
ENSNLEG00000012307	RBM28	100	100.000	ENSMLUG00000002186	RBM28	100	84.314	Myotis_lucifugus
ENSNLEG00000012307	RBM28	100	92.500	ENSNGAG00000017946	-	100	77.386	Nannospalax_galili
ENSNLEG00000012307	RBM28	100	100.000	ENSNGAG00000006480	-	81	100.000	Nannospalax_galili
ENSNLEG00000012307	RBM28	80	86.792	ENSMEUG00000009611	RBM28	90	86.792	Notamacropus_eugenii
ENSNLEG00000012307	RBM28	84	95.000	ENSOPRG00000015140	RBM28	90	76.415	Ochotona_princeps
ENSNLEG00000012307	RBM28	100	79.346	ENSODEG00000003213	-	100	79.216	Octodon_degus
ENSNLEG00000012307	RBM28	76	88.413	ENSODEG00000013217	-	83	88.413	Octodon_degus
ENSNLEG00000012307	RBM28	76	64.103	ENSONIG00000014924	rbm28	69	64.103	Oreochromis_niloticus
ENSNLEG00000012307	RBM28	87	80.976	ENSOANG00000000815	-	94	80.976	Ornithorhynchus_anatinus
ENSNLEG00000012307	RBM28	100	82.399	ENSOCUG00000003009	RBM28	100	82.660	Oryctolagus_cuniculus
ENSNLEG00000012307	RBM28	77	67.500	ENSORLG00000009636	rbm28	70	67.500	Oryzias_latipes
ENSNLEG00000012307	RBM28	77	67.500	ENSORLG00020002123	rbm28	71	67.500	Oryzias_latipes_hni
ENSNLEG00000012307	RBM28	76	72.222	ENSORLG00015015030	rbm28	96	61.616	Oryzias_latipes_hsok
ENSNLEG00000012307	RBM28	77	67.500	ENSOMEG00000007801	rbm28	100	50.499	Oryzias_melastigma
ENSNLEG00000012307	RBM28	100	83.146	ENSOGAG00000006011	RBM28	100	92.500	Otolemur_garnettii
ENSNLEG00000012307	RBM28	100	100.000	ENSOARG00000002547	RBM28	82	100.000	Ovis_aries
ENSNLEG00000012307	RBM28	100	100.000	ENSPPAG00000041730	RBM28	100	100.000	Pan_paniscus
ENSNLEG00000012307	RBM28	100	100.000	ENSPPRG00000004420	RBM28	100	100.000	Panthera_pardus
ENSNLEG00000012307	RBM28	100	100.000	ENSPTIG00000008550	RBM28	100	100.000	Panthera_tigris_altaica
ENSNLEG00000012307	RBM28	100	100.000	ENSPTRG00000019659	RBM28	100	100.000	Pan_troglodytes
ENSNLEG00000012307	RBM28	100	97.500	ENSPANG00000022295	RBM28	100	97.500	Papio_anubis
ENSNLEG00000012307	RBM28	99	57.500	ENSPKIG00000023453	rbm28	73	57.500	Paramormyrops_kingsleyae
ENSNLEG00000012307	RBM28	89	53.882	ENSPMGG00000012840	rbm28	100	48.231	Periophthalmus_magnuspinnatus
ENSNLEG00000012307	RBM28	87	100.000	ENSPEMG00000020673	Rbm28	100	77.676	Peromyscus_maniculatus_bairdii
ENSNLEG00000012307	RBM28	58	45.780	ENSPMAG00000002948	-	99	47.733	Petromyzon_marinus
ENSNLEG00000012307	RBM28	100	87.500	ENSPCIG00000012810	RBM28	100	70.909	Phascolarctos_cinereus
ENSNLEG00000012307	RBM28	80	65.000	ENSPFOG00000018209	rbm28	70	65.000	Poecilia_formosa
ENSNLEG00000012307	RBM28	79	65.000	ENSPLAG00000016078	rbm28	66	65.000	Poecilia_latipinna
ENSNLEG00000012307	RBM28	80	65.000	ENSPMEG00000004292	rbm28	70	65.000	Poecilia_mexicana
ENSNLEG00000012307	RBM28	77	65.000	ENSPREG00000014287	rbm28	67	65.000	Poecilia_reticulata
ENSNLEG00000012307	RBM28	100	100.000	ENSPPYG00000017975	RBM28	100	97.248	Pongo_abelii
ENSNLEG00000012307	RBM28	73	75.775	ENSPCAG00000008223	RBM28	83	75.833	Procavia_capensis
ENSNLEG00000012307	RBM28	100	86.458	ENSPCOG00000016797	RBM28	100	100.000	Propithecus_coquereli
ENSNLEG00000012307	RBM28	76	91.163	ENSPVAG00000005443	RBM28	76	91.163	Pteropus_vampyrus
ENSNLEG00000012307	RBM28	100	52.632	ENSPNYG00000014003	rbm28	70	64.103	Pundamilia_nyererei
ENSNLEG00000012307	RBM28	100	97.500	ENSRNOG00000005468	Rbm28	82	97.500	Rattus_norvegicus
ENSNLEG00000012307	RBM28	100	100.000	ENSRBIG00000033990	RBM28	100	100.000	Rhinopithecus_bieti
ENSNLEG00000012307	RBM28	100	100.000	ENSRROG00000040747	RBM28	100	100.000	Rhinopithecus_roxellana
ENSNLEG00000012307	RBM28	82	100.000	ENSSBOG00000012308	RBM28	100	88.976	Saimiri_boliviensis_boliviensis
ENSNLEG00000012307	RBM28	96	67.072	ENSSHAG00000017017	RBM28	99	65.688	Sarcophilus_harrisii
ENSNLEG00000012307	RBM28	86	61.722	ENSSFOG00015001231	rbm28	74	62.500	Scleropages_formosus
ENSNLEG00000012307	RBM28	70	52.847	ENSSMAG00000003885	rbm28	98	51.148	Scophthalmus_maximus
ENSNLEG00000012307	RBM28	82	48.752	ENSSDUG00000014270	rbm28	96	53.693	Seriola_dumerili
ENSNLEG00000012307	RBM28	77	57.500	ENSSLDG00000020099	rbm28	69	57.500	Seriola_lalandi_dorsalis
ENSNLEG00000012307	RBM28	71	97.500	ENSSARG00000008303	RBM28	81	84.962	Sorex_araneus
ENSNLEG00000012307	RBM28	66	73.529	ENSSPUG00000000838	RBM28	80	73.529	Sphenodon_punctatus
ENSNLEG00000012307	RBM28	70	53.084	ENSSPAG00000023305	rbm28	100	49.388	Stegastes_partitus
ENSNLEG00000012307	RBM28	100	100.000	ENSSSCG00000031847	RBM28	100	83.922	Sus_scrofa
ENSNLEG00000012307	RBM28	78	65.000	ENSTRUG00000013311	rbm28	82	65.000	Takifugu_rubripes
ENSNLEG00000012307	RBM28	99	65.000	ENSTNIG00000017962	rbm28	99	51.223	Tetraodon_nigroviridis
ENSNLEG00000012307	RBM28	83	88.462	ENSTBEG00000012749	RBM28	94	71.528	Tupaia_belangeri
ENSNLEG00000012307	RBM28	100	100.000	ENSTTRG00000013647	RBM28	82	100.000	Tursiops_truncatus
ENSNLEG00000012307	RBM28	100	100.000	ENSUAMG00000006949	RBM28	85	100.000	Ursus_americanus
ENSNLEG00000012307	RBM28	100	100.000	ENSUMAG00000005997	RBM28	100	83.007	Ursus_maritimus
ENSNLEG00000012307	RBM28	94	72.014	ENSVPAG00000008304	RBM28	87	74.516	Vicugna_pacos
ENSNLEG00000012307	RBM28	100	95.000	ENSVVUG00000007270	RBM28	100	83.529	Vulpes_vulpes
ENSNLEG00000012307	RBM28	99	67.500	ENSXETG00000009271	rbm28	99	55.698	Xenopus_tropicalis
ENSNLEG00000012307	RBM28	70	53.759	ENSXCOG00000020357	rbm28	99	51.992	Xiphophorus_couchianus
ENSNLEG00000012307	RBM28	79	67.500	ENSXMAG00000004415	rbm28	70	67.500	Xiphophorus_maculatus