EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000012349 (Gene tree)
Gene ID: 100595062
Gene Symbol: -
Alias: DKFZp547I1315|DKFZp686E01200|DKFZp781D1727|FLJ38614
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 124871 bases
Position: chr6:112113787-112238657
Accession: 100595062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000043086	ResIII	PF04851.15	2.7e-08	1	1
ENSNLEP00000015029	ResIII	PF04851.15	2.9e-08	1	1
ENSNLEP00000043989	ResIII	PF04851.15	3.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000015779	-	5169	-	ENSNLEP00000015029	1722 (aa)	-	G1RP65
ENSNLET00000042749	-	1278	-	ENSNLEP00000036431	425 (aa)	-	A0A2I3GYS5
ENSNLET00000034901	-	5241	-	ENSNLEP00000043086	1746 (aa)	-	A0A2I3HHZ7
ENSNLET00000051396	-	96	-	ENSNLEP00000032751	32 (aa)	-	A0A2I3GN61
ENSNLET00000055390	-	5451	XM_012507125	ENSNLEP00000043989	1816 (aa)	XP_012362579	A0A2I3HK42
ENSNLET00000056245	-	1545	-	ENSNLEP00000042775	514 (aa)	-	A0A2I3HGX2

Gene Model

Click here to download ENSNLEG00000012349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000012349's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000012349	-	89	58.850	ENSNLEG00000014493	CHD1	99	65.957

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000012349	-	100	97.155	ENSG00000173575	CHD2	100	100.000	Homo_sapiens
ENSNLEG00000012349	-	95	72.488	ENSAPOG00000008913	chd2	100	69.941	Acanthochromis_polyacanthus
ENSNLEG00000012349	-	66	94.444	ENSAMEG00000010805	-	100	94.792	Ailuropoda_melanoleuca
ENSNLEG00000012349	-	95	69.581	ENSAOCG00000016332	chd2	100	67.419	Amphiprion_ocellaris
ENSNLEG00000012349	-	95	72.096	ENSAPEG00000016676	chd2	100	69.778	Amphiprion_percula
ENSNLEG00000012349	-	95	71.835	ENSATEG00000005246	chd2	100	69.582	Anabas_testudineus
ENSNLEG00000012349	-	100	85.388	ENSAPLG00000011141	-	100	85.606	Anas_platyrhynchos
ENSNLEG00000012349	-	98	78.206	ENSACAG00000000088	-	99	78.133	Anolis_carolinensis
ENSNLEG00000012349	-	100	96.827	ENSANAG00000024017	-	100	96.827	Aotus_nancymaae
ENSNLEG00000012349	-	90	71.373	ENSACLG00000021370	chd2	73	75.218	Astatotilapia_calliptera
ENSNLEG00000012349	-	100	96.608	ENSCJAG00000020444	-	100	96.608	Callithrix_jacchus
ENSNLEG00000012349	-	99	95.741	ENSCAFG00000010998	CHD2	100	94.996	Canis_familiaris
ENSNLEG00000012349	-	99	92.641	ENSCHIG00000022261	-	99	92.641	Capra_hircus
ENSNLEG00000012349	-	100	96.061	ENSTSYG00000003272	-	100	96.061	Carlito_syrichta
ENSNLEG00000012349	-	93	95.740	ENSCPOG00000005800	-	100	95.740	Cavia_porcellus
ENSNLEG00000012349	-	100	96.827	ENSCCAG00000035304	-	100	96.827	Cebus_capucinus
ENSNLEG00000012349	-	100	97.046	ENSCATG00000031069	-	100	97.046	Cercocebus_atys
ENSNLEG00000012349	-	100	94.748	ENSCLAG00000016269	-	100	94.967	Chinchilla_lanigera
ENSNLEG00000012349	-	100	97.101	ENSCSAG00000017007	-	100	97.101	Chlorocebus_sabaeus
ENSNLEG00000012349	-	80	100.000	ENSCHOG00000000608	-	82	100.000	Choloepus_hoffmanni
ENSNLEG00000012349	-	76	92.625	ENSCPBG00000018049	-	97	91.346	Chrysemys_picta_bellii
ENSNLEG00000012349	-	78	52.326	ENSCSAVG00000007580	-	93	58.749	Ciona_savignyi
ENSNLEG00000012349	-	100	96.991	ENSCANG00000038126	-	100	96.991	Colobus_angolensis_palliatus
ENSNLEG00000012349	-	100	94.639	ENSCGRG00001006649	Chd2	100	94.858	Cricetulus_griseus_chok1gshd
ENSNLEG00000012349	-	100	94.639	ENSCGRG00000018154	Chd2	100	94.858	Cricetulus_griseus_crigri
ENSNLEG00000012349	-	94	65.049	ENSCSEG00000003646	chd2	93	66.316	Cynoglossus_semilaevis
ENSNLEG00000012349	-	99	63.808	ENSCVAG00000002427	chd2	99	68.571	Cyprinodon_variegatus
ENSNLEG00000012349	-	95	68.758	ENSDARG00000060687	chd2	100	69.297	Danio_rerio
ENSNLEG00000012349	-	99	95.131	ENSDNOG00000009796	-	100	95.131	Dasypus_novemcinctus
ENSNLEG00000012349	-	99	95.907	ENSEASG00005015526	-	99	100.000	Equus_asinus_asinus
ENSNLEG00000012349	-	94	71.990	ENSELUG00000017981	chd2	94	85.185	Esox_lucius
ENSNLEG00000012349	-	100	86.623	ENSFALG00000010369	-	100	86.678	Ficedula_albicollis
ENSNLEG00000012349	-	100	94.803	ENSFDAG00000020651	-	100	95.022	Fukomys_damarensis
ENSNLEG00000012349	-	87	70.927	ENSFHEG00000002119	chd2	91	69.292	Fundulus_heteroclitus
ENSNLEG00000012349	-	99	67.787	ENSGMOG00000002890	chd2	99	68.924	Gadus_morhua
ENSNLEG00000012349	-	100	85.893	ENSGALG00000006949	CHD2	100	86.055	Gallus_gallus
ENSNLEG00000012349	-	95	69.026	ENSGAFG00000001905	chd2	97	67.641	Gambusia_affinis
ENSNLEG00000012349	-	96	68.951	ENSGACG00000013246	chd2	100	68.433	Gasterosteus_aculeatus
ENSNLEG00000012349	-	71	97.753	ENSGAGG00000013176	-	95	97.753	Gopherus_agassizii
ENSNLEG00000012349	-	100	96.696	ENSGGOG00000015677	CHD2	100	96.696	Gorilla_gorilla
ENSNLEG00000012349	-	95	72.236	ENSHBUG00000017947	chd2	100	69.661	Haplochromis_burtoni
ENSNLEG00000012349	-	100	94.420	ENSHGLG00000004435	CHD2	100	94.639	Heterocephalus_glaber_female
ENSNLEG00000012349	-	100	94.243	ENSHGLG00100016376	-	100	94.243	Heterocephalus_glaber_male
ENSNLEG00000012349	-	94	66.364	ENSHCOG00000008855	chd2	98	64.664	Hippocampus_comes
ENSNLEG00000012349	-	75	71.991	ENSIPUG00000000488	chd2	99	69.254	Ictalurus_punctatus
ENSNLEG00000012349	-	100	96.007	ENSSTOG00000001270	-	100	96.007	Ictidomys_tridecemlineatus
ENSNLEG00000012349	-	100	94.639	ENSJJAG00000000213	Chd2	100	94.858	Jaculus_jaculus
ENSNLEG00000012349	-	82	72.288	ENSKMAG00000015849	chd2	99	70.718	Kryptolebias_marmoratus
ENSNLEG00000012349	-	79	93.619	ENSLAFG00000016885	-	100	93.909	Loxodonta_africana
ENSNLEG00000012349	-	100	97.155	ENSMFAG00000033343	-	100	97.155	Macaca_fascicularis
ENSNLEG00000012349	-	100	97.155	ENSMMUG00000011782	-	100	97.155	Macaca_mulatta
ENSNLEG00000012349	-	100	96.776	ENSMNEG00000036875	-	100	96.776	Macaca_nemestrina
ENSNLEG00000012349	-	100	97.101	ENSMLEG00000035026	-	100	97.101	Mandrillus_leucophaeus
ENSNLEG00000012349	-	95	72.136	ENSMAMG00000009082	chd2	100	68.921	Mastacembelus_armatus
ENSNLEG00000012349	-	96	67.604	ENSMZEG00005021333	chd2	72	75.218	Maylandia_zebra
ENSNLEG00000012349	-	99	85.738	ENSMGAG00000008966	-	99	85.840	Meleagris_gallopavo
ENSNLEG00000012349	-	99	95.354	ENSMICG00000000332	-	99	95.331	Microcebus_murinus
ENSNLEG00000012349	-	100	94.314	ENSMOCG00000015124	Chd2	100	94.533	Microtus_ochrogaster
ENSNLEG00000012349	-	100	89.989	ENSMODG00000013158	-	100	90.152	Monodelphis_domestica
ENSNLEG00000012349	-	95	69.542	ENSMALG00000007755	chd2	94	72.359	Monopterus_albus
ENSNLEG00000012349	-	100	93.928	MGP_CAROLIEiJ_G0029860	Chd2	100	94.147	Mus_caroli
ENSNLEG00000012349	-	100	93.654	ENSMUSG00000078671	Chd2	100	93.873	Mus_musculus
ENSNLEG00000012349	-	100	93.931	MGP_PahariEiJ_G0013082	Chd2	100	94.150	Mus_pahari
ENSNLEG00000012349	-	100	93.764	MGP_SPRETEiJ_G0030962	Chd2	100	93.982	Mus_spretus
ENSNLEG00000012349	-	100	95.788	ENSMPUG00000017577	-	100	95.788	Mustela_putorius_furo
ENSNLEG00000012349	-	100	92.508	ENSMLUG00000009292	-	100	92.725	Myotis_lucifugus
ENSNLEG00000012349	-	100	95.460	ENSNGAG00000010792	Chd2	100	95.460	Nannospalax_galili
ENSNLEG00000012349	-	95	71.368	ENSNBRG00000020591	chd2	95	69.321	Neolamprologus_brichardi
ENSNLEG00000012349	-	75	89.219	ENSMEUG00000001522	-	76	90.551	Notamacropus_eugenii
ENSNLEG00000012349	-	100	93.764	ENSODEG00000016028	-	100	93.982	Octodon_degus
ENSNLEG00000012349	-	95	72.115	ENSONIG00000015136	chd2	100	70.091	Oreochromis_niloticus
ENSNLEG00000012349	-	88	82.506	ENSOANG00000004385	-	99	87.955	Ornithorhynchus_anatinus
ENSNLEG00000012349	-	100	84.986	ENSOCUG00000001628	-	99	97.573	Oryctolagus_cuniculus
ENSNLEG00000012349	-	96	70.000	ENSORLG00000008403	chd2	100	68.692	Oryzias_latipes
ENSNLEG00000012349	-	96	70.191	ENSORLG00020004138	chd2	100	68.871	Oryzias_latipes_hni
ENSNLEG00000012349	-	99	64.368	ENSOMEG00000005831	chd2	100	63.039	Oryzias_melastigma
ENSNLEG00000012349	-	100	93.873	ENSOGAG00000010399	-	100	93.873	Otolemur_garnettii
ENSNLEG00000012349	-	99	94.371	ENSOARG00000010343	-	100	93.053	Ovis_aries
ENSNLEG00000012349	-	100	96.122	ENSPPAG00000030381	-	100	96.122	Pan_paniscus
ENSNLEG00000012349	-	100	97.210	ENSPTRG00000007478	CHD2	100	97.210	Pan_troglodytes
ENSNLEG00000012349	-	100	94.147	ENSPANG00000033355	-	100	94.147	Papio_anubis
ENSNLEG00000012349	-	98	69.028	ENSPKIG00000000495	chd2	100	69.218	Paramormyrops_kingsleyae
ENSNLEG00000012349	-	80	80.184	ENSPMGG00000009941	chd2	99	68.290	Periophthalmus_magnuspinnatus
ENSNLEG00000012349	-	100	94.584	ENSPEMG00000019507	Chd2	100	94.803	Peromyscus_maniculatus_bairdii
ENSNLEG00000012349	-	91	90.545	ENSPCIG00000009417	-	100	89.464	Phascolarctos_cinereus
ENSNLEG00000012349	-	95	72.319	ENSPFOG00000007050	chd2	100	70.145	Poecilia_formosa
ENSNLEG00000012349	-	95	72.531	ENSPLAG00000005067	chd2	100	70.446	Poecilia_latipinna
ENSNLEG00000012349	-	95	72.379	ENSPMEG00000019628	chd2	100	70.199	Poecilia_mexicana
ENSNLEG00000012349	-	100	95.897	ENSPPYG00000006799	-	100	95.897	Pongo_abelii
ENSNLEG00000012349	-	100	96.225	ENSPCOG00000028084	-	100	96.225	Propithecus_coquereli
ENSNLEG00000012349	-	90	71.429	ENSPNYG00000010273	chd2	73	75.218	Pundamilia_nyererei
ENSNLEG00000012349	-	89	70.000	ENSPNAG00000016719	chd2	99	68.469	Pygocentrus_nattereri
ENSNLEG00000012349	-	100	93.873	ENSRNOG00000012716	Chd2	100	94.092	Rattus_norvegicus
ENSNLEG00000012349	-	100	94.806	ENSRBIG00000036875	-	100	94.806	Rhinopithecus_bieti
ENSNLEG00000012349	-	100	96.882	ENSRROG00000041087	-	100	96.882	Rhinopithecus_roxellana
ENSNLEG00000012349	-	100	96.991	ENSSBOG00000023754	-	100	96.991	Saimiri_boliviensis_boliviensis
ENSNLEG00000012349	-	100	90.207	ENSSHAG00000012513	-	100	90.424	Sarcophilus_harrisii
ENSNLEG00000012349	-	100	71.444	ENSSFOG00015023759	chd2	100	71.067	Scleropages_formosus
ENSNLEG00000012349	-	96	69.395	ENSSMAG00000001726	chd2	100	68.382	Scophthalmus_maximus
ENSNLEG00000012349	-	95	70.485	ENSSLDG00000001146	chd2	100	68.415	Seriola_lalandi_dorsalis
ENSNLEG00000012349	-	82	98.333	ENSSARG00000014112	-	82	98.333	Sorex_araneus
ENSNLEG00000012349	-	99	81.553	ENSSPUG00000011266	-	99	81.959	Sphenodon_punctatus
ENSNLEG00000012349	-	95	71.343	ENSSPAG00000016452	chd2	95	72.632	Stegastes_partitus
ENSNLEG00000012349	-	100	96.061	ENSSSCG00000002266	-	100	96.061	Sus_scrofa
ENSNLEG00000012349	-	100	86.532	ENSTGUG00000008540	-	100	86.641	Taeniopygia_guttata
ENSNLEG00000012349	-	88	67.120	ENSTRUG00000008842	chd2	91	64.629	Takifugu_rubripes
ENSNLEG00000012349	-	87	70.359	ENSTNIG00000010760	chd2	97	70.987	Tetraodon_nigroviridis
ENSNLEG00000012349	-	75	97.797	ENSTBEG00000017730	-	75	97.797	Tupaia_belangeri
ENSNLEG00000012349	-	95	99.091	ENSTTRG00000000430	-	90	99.091	Tursiops_truncatus
ENSNLEG00000012349	-	100	92.998	ENSUMAG00000000083	-	100	92.724	Ursus_maritimus
ENSNLEG00000012349	-	85	98.195	ENSVPAG00000009645	-	85	98.195	Vicugna_pacos
ENSNLEG00000012349	-	86	77.360	ENSXETG00000024129	chd2	94	78.112	Xenopus_tropicalis
ENSNLEG00000012349	-	95	69.147	ENSXCOG00000020255	chd2	99	67.530	Xiphophorus_couchianus
ENSNLEG00000012349	-	95	72.591	ENSXMAG00000002707	chd2	100	70.215	Xiphophorus_maculatus