EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNLEG00000012389 (Gene tree)
Gene ID
100591152
Gene Symbol
SMARCA4
Alias
BAF190|BRG1|FLJ39786|SNF2|SNF2-BETA|SNF2L4|SNF2LB|SWI2|hSNF2b
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Nomascus_leucogenys
Status
putative
Strand
Minus strand
Length
79431 bases
Position
chr10:63257025-63336455
Accession
100591152
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNLEP00000046296ResIIIPF04851.158.8e-1011
ENSNLEP00000043791ResIIIPF04851.159e-1011
ENSNLEP00000015131ResIIIPF04851.152.3e-0911
ENSNLEP00000032349ResIIIPF04851.152.4e-0911
ENSNLEP00000046296BRKPF07533.161.7e-1711
ENSNLEP00000043791BRKPF07533.161.7e-1711
ENSNLEP00000032349BRKPF07533.161.9e-1711
ENSNLEP00000015131BRKPF07533.161.9e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNLET00000045902SMARCA4-2034842-ENSNLEP000000437911613 (aa)-A0A2I3HK03
ENSNLET00000015887SMARCA4-2014725-ENSNLEP000000151311574 (aa)-G1RPG7
ENSNLET00000056047SMARCA4-2024848XM_012509315ENSNLEP000000323491615 (aa)XP_012364769A0A2I3GM09
ENSNLET00000033518SMARCA4-2044809-ENSNLEP000000462961602 (aa)-A0A2I3HS35
Gene Model
Click here to download ENSNLEG00000012389's gene model file
Pathways
Pathway IDPathway NameSource
nle04714ThermogenesisKEGG
nle05225Hepatocellular carcinomaKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000012389's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNLEG00000012389SMARCA48479.650ENSNLEG00000008575SMARCA29281.640
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNLEG00000012389SMARCA410093.988ENSG00000127616SMARCA410099.363Homo_sapiens
ENSNLEG00000012389SMARCA49480.486ENSAPOG00000004542SMARCA49980.124Acanthochromis_polyacanthus
ENSNLEG00000012389SMARCA47284.370ENSAPOG00000003509smarca4a9383.906Acanthochromis_polyacanthus
ENSNLEG00000012389SMARCA410090.915ENSAMEG00000010868SMARCA410090.915Ailuropoda_melanoleuca
ENSNLEG00000012389SMARCA49484.596ENSACIG00000021550smarca4a9584.709Amphilophus_citrinellus
ENSNLEG00000012389SMARCA49586.624ENSACIG00000003035-9786.201Amphilophus_citrinellus
ENSNLEG00000012389SMARCA49185.278ENSAOCG00000019167smarca4a9985.566Amphiprion_ocellaris
ENSNLEG00000012389SMARCA49383.147ENSAOCG00000009450-9783.344Amphiprion_ocellaris
ENSNLEG00000012389SMARCA49584.156ENSAPEG00000023108-9384.377Amphiprion_percula
ENSNLEG00000012389SMARCA49185.347ENSAPEG00000015559smarca4a9985.635Amphiprion_percula
ENSNLEG00000012389SMARCA49484.650ENSATEG00000011524smarca4a10082.145Anabas_testudineus
ENSNLEG00000012389SMARCA49481.414ENSATEG00000001094-9780.909Anabas_testudineus
ENSNLEG00000012389SMARCA49698.324ENSANAG00000036991SMARCA410093.810Aotus_nancymaae
ENSNLEG00000012389SMARCA49581.550ENSACLG00000008638-9886.226Astatotilapia_calliptera
ENSNLEG00000012389SMARCA49883.271ENSACLG00000000163smarca4a9784.728Astatotilapia_calliptera
ENSNLEG00000012389SMARCA49383.865ENSAMXG00000011238-9983.391Astyanax_mexicanus
ENSNLEG00000012389SMARCA49482.150ENSAMXG00000021023smarca4a9687.500Astyanax_mexicanus
ENSNLEG00000012389SMARCA49892.755ENSBTAG00000019220SMARCA410092.755Bos_taurus
ENSNLEG00000012389SMARCA410093.810ENSCJAG00000005936SMARCA410093.810Callithrix_jacchus
ENSNLEG00000012389SMARCA49893.560ENSCAFG00000017584SMARCA410093.560Canis_familiaris
ENSNLEG00000012389SMARCA49993.158ENSCAFG00020024620SMARCA49993.158Canis_lupus_dingo
ENSNLEG00000012389SMARCA410085.264ENSCHIG00000015318SMARCA410088.319Capra_hircus
ENSNLEG00000012389SMARCA410092.754ENSTSYG00000012966SMARCA410093.082Carlito_syrichta
ENSNLEG00000012389SMARCA49096.498ENSCAPG00000015932SMARCA410097.233Cavia_aperea
ENSNLEG00000012389SMARCA49694.933ENSCPOG00000015549SMARCA410092.817Cavia_porcellus
ENSNLEG00000012389SMARCA410088.121ENSCCAG00000031660SMARCA410088.121Cebus_capucinus
ENSNLEG00000012389SMARCA410094.111ENSCATG00000029530SMARCA410094.111Cercocebus_atys
ENSNLEG00000012389SMARCA49892.565ENSCLAG00000011946SMARCA410092.565Chinchilla_lanigera
ENSNLEG00000012389SMARCA49891.213ENSCPBG00000009994SMARCA410091.213Chrysemys_picta_bellii
ENSNLEG00000012389SMARCA410094.050ENSCANG00000036013SMARCA410094.050Colobus_angolensis_palliatus
ENSNLEG00000012389SMARCA49893.288ENSCGRG00001016732Smarca410092.941Cricetulus_griseus_chok1gshd
ENSNLEG00000012389SMARCA49893.288ENSCGRG00000017242Smarca410092.941Cricetulus_griseus_crigri
ENSNLEG00000012389SMARCA49184.718ENSCSEG00000014771smarca4a9585.273Cynoglossus_semilaevis
ENSNLEG00000012389SMARCA49483.977ENSCVAG00000006979smarca4a9684.231Cyprinodon_variegatus
ENSNLEG00000012389SMARCA49383.586ENSCVAG00000003018-9683.509Cyprinodon_variegatus
ENSNLEG00000012389SMARCA49485.311ENSDARG00000077226smarca4a9584.415Danio_rerio
ENSNLEG00000012389SMARCA49181.341ENSDARG00000104339SMARCA49581.131Danio_rerio
ENSNLEG00000012389SMARCA410086.055ENSDNOG00000048847SMARCA49493.659Dasypus_novemcinctus
ENSNLEG00000012389SMARCA48790.276ENSDORG00000002544Smarca493100.000Dipodomys_ordii
ENSNLEG00000012389SMARCA49583.587ENSETEG00000013361SMARCA49089.641Echinops_telfairi
ENSNLEG00000012389SMARCA49992.670ENSEASG00005006167SMARCA49992.670Equus_asinus_asinus
ENSNLEG00000012389SMARCA49695.446ENSECAG00000008334SMARCA410093.251Equus_caballus
ENSNLEG00000012389SMARCA49483.951ENSELUG00000010247smarca4a9583.355Esox_lucius
ENSNLEG00000012389SMARCA49474.919ENSELUG00000023232-9474.984Esox_lucius
ENSNLEG00000012389SMARCA410091.845ENSFCAG00000004894SMARCA410093.325Felis_catus
ENSNLEG00000012389SMARCA47588.898ENSFALG00000004208SMARCA49885.615Ficedula_albicollis
ENSNLEG00000012389SMARCA49197.495ENSFDAG00000012237SMARCA49497.495Fukomys_damarensis
ENSNLEG00000012389SMARCA49481.664ENSFHEG00000007902-9481.407Fundulus_heteroclitus
ENSNLEG00000012389SMARCA49482.215ENSFHEG00000010182smarca4a9984.480Fundulus_heteroclitus
ENSNLEG00000012389SMARCA48773.579ENSGMOG00000002649smarca4a8480.394Gadus_morhua
ENSNLEG00000012389SMARCA49076.971ENSGMOG00000005756-8483.582Gadus_morhua
ENSNLEG00000012389SMARCA47594.924ENSGALG00000047145SMARCA410094.839Gallus_gallus
ENSNLEG00000012389SMARCA48486.267ENSGAFG00000014900smarca4a9982.541Gambusia_affinis
ENSNLEG00000012389SMARCA49676.463ENSGAFG00000008827-9579.156Gambusia_affinis
ENSNLEG00000012389SMARCA49283.246ENSGACG00000006691smarca4a10080.353Gasterosteus_aculeatus
ENSNLEG00000012389SMARCA49677.833ENSGACG00000016033-9778.697Gasterosteus_aculeatus
ENSNLEG00000012389SMARCA49891.321ENSGAGG00000016757SMARCA410091.321Gopherus_agassizii
ENSNLEG00000012389SMARCA410093.929ENSGGOG00000009882SMARCA410093.929Gorilla_gorilla
ENSNLEG00000012389SMARCA49481.159ENSHBUG00000005447-9786.043Haplochromis_burtoni
ENSNLEG00000012389SMARCA49485.407ENSHBUG00000021172smarca4a10082.095Haplochromis_burtoni
ENSNLEG00000012389SMARCA410091.310ENSHGLG00000010519SMARCA410092.602Heterocephalus_glaber_female
ENSNLEG00000012389SMARCA49890.920ENSHGLG00100013774SMARCA410091.414Heterocephalus_glaber_male
ENSNLEG00000012389SMARCA49483.397ENSHCOG00000009510smarca4a9783.770Hippocampus_comes
ENSNLEG00000012389SMARCA49282.419ENSIPUG00000016346-9381.884Ictalurus_punctatus
ENSNLEG00000012389SMARCA49485.375ENSIPUG00000006107smarca4a9783.648Ictalurus_punctatus
ENSNLEG00000012389SMARCA49893.781ENSSTOG00000007939SMARCA410093.437Ictidomys_tridecemlineatus
ENSNLEG00000012389SMARCA410091.488ENSJJAG00000012877Smarca410091.488Jaculus_jaculus
ENSNLEG00000012389SMARCA49484.289ENSKMAG00000011931smarca4a10081.162Kryptolebias_marmoratus
ENSNLEG00000012389SMARCA49483.517ENSKMAG00000019518-9883.549Kryptolebias_marmoratus
ENSNLEG00000012389SMARCA49281.109ENSLBEG00000020655-7976.190Labrus_bergylta
ENSNLEG00000012389SMARCA49684.477ENSLBEG00000017383smarca4a9883.593Labrus_bergylta
ENSNLEG00000012389SMARCA45387.470ENSLACG00000015309SMARCA410087.232Latimeria_chalumnae
ENSNLEG00000012389SMARCA49584.665ENSLOCG00000007820smarca4a8788.487Lepisosteus_oculatus
ENSNLEG00000012389SMARCA49893.387ENSLAFG00000001433SMARCA410093.387Loxodonta_africana
ENSNLEG00000012389SMARCA410094.111ENSMFAG00000032146SMARCA410094.111Macaca_fascicularis
ENSNLEG00000012389SMARCA49895.882ENSMMUG00000012042SMARCA410093.746Macaca_mulatta
ENSNLEG00000012389SMARCA410093.690ENSMNEG00000028512SMARCA410093.690Macaca_nemestrina
ENSNLEG00000012389SMARCA410094.050ENSMLEG00000034976SMARCA410094.050Mandrillus_leucophaeus
ENSNLEG00000012389SMARCA49483.062ENSMAMG00000002841-9883.128Mastacembelus_armatus
ENSNLEG00000012389SMARCA49484.831ENSMAMG00000009256smarca4a9584.730Mastacembelus_armatus
ENSNLEG00000012389SMARCA49485.156ENSMZEG00005003889smarca4a10081.984Maylandia_zebra
ENSNLEG00000012389SMARCA49382.697ENSMZEG00005023861-9880.251Maylandia_zebra
ENSNLEG00000012389SMARCA49893.288ENSMAUG00000020731Smarca410092.707Mesocricetus_auratus
ENSNLEG00000012389SMARCA410092.917ENSMICG00000009806SMARCA410093.325Microcebus_murinus
ENSNLEG00000012389SMARCA49893.288ENSMOCG00000022209Smarca410092.769Microtus_ochrogaster
ENSNLEG00000012389SMARCA49483.844ENSMMOG00000007571smarca4a9882.494Mola_mola
ENSNLEG00000012389SMARCA49478.893ENSMMOG00000008466-9483.747Mola_mola
ENSNLEG00000012389SMARCA410090.942ENSMODG00000006287SMARCA410090.942Monodelphis_domestica
ENSNLEG00000012389SMARCA49185.425ENSMALG00000003388smarca4a9585.058Monopterus_albus
ENSNLEG00000012389SMARCA49182.627ENSMALG00000021534-9985.238Monopterus_albus
ENSNLEG00000012389SMARCA49893.061MGP_CAROLIEiJ_G0031879Smarca410095.753Mus_caroli
ENSNLEG00000012389SMARCA49893.061ENSMUSG00000032187Smarca49995.753Mus_musculus
ENSNLEG00000012389SMARCA49892.565MGP_PahariEiJ_G0014745Smarca410095.135Mus_pahari
ENSNLEG00000012389SMARCA49893.061MGP_SPRETEiJ_G0033003Smarca410095.753Mus_spretus
ENSNLEG00000012389SMARCA49893.498ENSMPUG00000005711SMARCA410093.498Mustela_putorius_furo
ENSNLEG00000012389SMARCA49893.375ENSMLUG00000004491-10093.375Myotis_lucifugus
ENSNLEG00000012389SMARCA410090.833ENSNGAG00000021852Smarca410092.508Nannospalax_galili
ENSNLEG00000012389SMARCA49882.464ENSNBRG00000011457smarca4a9683.398Neolamprologus_brichardi
ENSNLEG00000012389SMARCA49181.667ENSNBRG00000018865-9885.394Neolamprologus_brichardi
ENSNLEG00000012389SMARCA475100.000ENSOPRG00000000885-73100.000Ochotona_princeps
ENSNLEG00000012389SMARCA49491.969ENSODEG00000017127SMARCA49897.807Octodon_degus
ENSNLEG00000012389SMARCA49481.222ENSONIG00000018040-9580.590Oreochromis_niloticus
ENSNLEG00000012389SMARCA49485.556ENSONIG00000008196smarca4a10082.574Oreochromis_niloticus
ENSNLEG00000012389SMARCA49788.967ENSOCUG00000001787SMARCA49788.967Oryctolagus_cuniculus
ENSNLEG00000012389SMARCA49180.536ENSORLG00000003955-9786.049Oryzias_latipes
ENSNLEG00000012389SMARCA49183.656ENSORLG00000015452smarca4a9583.408Oryzias_latipes
ENSNLEG00000012389SMARCA49180.483ENSORLG00020009728-9785.974Oryzias_latipes_hni
ENSNLEG00000012389SMARCA49483.494ENSORLG00020004611smarca4a9784.513Oryzias_latipes_hni
ENSNLEG00000012389SMARCA49480.214ENSORLG00015007739-9885.198Oryzias_latipes_hsok
ENSNLEG00000012389SMARCA49483.622ENSORLG00015016560smarca4a9884.630Oryzias_latipes_hsok
ENSNLEG00000012389SMARCA49180.797ENSOMEG00000016626-9580.928Oryzias_melastigma
ENSNLEG00000012389SMARCA49484.106ENSOMEG00000007486smarca4a9584.615Oryzias_melastigma
ENSNLEG00000012389SMARCA49196.314ENSOGAG00000016148SMARCA49996.314Otolemur_garnettii
ENSNLEG00000012389SMARCA49892.791ENSOARG00000017454SMARCA410092.791Ovis_aries
ENSNLEG00000012389SMARCA410094.411ENSPPAG00000043191SMARCA410094.411Pan_paniscus
ENSNLEG00000012389SMARCA410091.845ENSPPRG00000000064SMARCA410093.325Panthera_pardus
ENSNLEG00000012389SMARCA48999.034ENSPTIG00000017447SMARCA49499.034Panthera_tigris_altaica
ENSNLEG00000012389SMARCA410094.411ENSPTRG00000010488SMARCA410094.411Pan_troglodytes
ENSNLEG00000012389SMARCA410095.553ENSPANG00000011042SMARCA410095.553Papio_anubis
ENSNLEG00000012389SMARCA49284.867ENSPKIG00000010087-9484.013Paramormyrops_kingsleyae
ENSNLEG00000012389SMARCA49485.339ENSPKIG00000007770SMARCA49585.240Paramormyrops_kingsleyae
ENSNLEG00000012389SMARCA49685.670ENSPSIG00000005547SMARCA49586.378Pelodiscus_sinensis
ENSNLEG00000012389SMARCA49893.350ENSPEMG00000020389Smarca410092.831Peromyscus_maniculatus_bairdii
ENSNLEG00000012389SMARCA49892.808ENSPCIG00000017138SMARCA410092.808Phascolarctos_cinereus
ENSNLEG00000012389SMARCA49480.967ENSPFOG00000012930-9580.824Poecilia_formosa
ENSNLEG00000012389SMARCA49681.994ENSPFOG00000007892smarca4a9584.335Poecilia_formosa
ENSNLEG00000012389SMARCA49483.483ENSPLAG00000014294smarca4a9486.939Poecilia_latipinna
ENSNLEG00000012389SMARCA49680.592ENSPLAG00000018616-9580.520Poecilia_latipinna
ENSNLEG00000012389SMARCA49483.483ENSPMEG00000003725smarca4a9784.399Poecilia_mexicana
ENSNLEG00000012389SMARCA49481.824ENSPMEG00000008929-9781.537Poecilia_mexicana
ENSNLEG00000012389SMARCA49483.148ENSPREG00000014608smarca4a9191.429Poecilia_reticulata
ENSNLEG00000012389SMARCA49481.093ENSPREG00000014823-9780.649Poecilia_reticulata
ENSNLEG00000012389SMARCA410092.024ENSPPYG00000009568SMARCA410092.024Pongo_abelii
ENSNLEG00000012389SMARCA47685.271ENSPCAG00000014054SMARCA47285.271Procavia_capensis
ENSNLEG00000012389SMARCA410092.923ENSPCOG00000023011SMARCA410093.201Propithecus_coquereli
ENSNLEG00000012389SMARCA49698.682ENSPVAG00000007787SMARCA49698.682Pteropus_vampyrus
ENSNLEG00000012389SMARCA49883.881ENSPNYG00000000717smarca4a9784.847Pundamilia_nyererei
ENSNLEG00000012389SMARCA49579.897ENSPNYG00000023995-9786.043Pundamilia_nyererei
ENSNLEG00000012389SMARCA49483.494ENSPNAG00000006636-9782.960Pygocentrus_nattereri
ENSNLEG00000012389SMARCA48987.105ENSPNAG00000024136smarca4a9286.629Pygocentrus_nattereri
ENSNLEG00000012389SMARCA49893.123ENSRNOG00000009271Smarca410093.123Rattus_norvegicus
ENSNLEG00000012389SMARCA410093.869ENSRBIG00000038696SMARCA410093.869Rhinopithecus_bieti
ENSNLEG00000012389SMARCA410093.929ENSRROG00000045509SMARCA410093.929Rhinopithecus_roxellana
ENSNLEG00000012389SMARCA49895.936ENSSBOG00000026896SMARCA49795.936Saimiri_boliviensis_boliviensis
ENSNLEG00000012389SMARCA49892.684ENSSHAG00000001642SMARCA410092.684Sarcophilus_harrisii
ENSNLEG00000012389SMARCA49379.729ENSSFOG00015009921-9089.643Scleropages_formosus
ENSNLEG00000012389SMARCA49485.988ENSSFOG00015013823smarca49584.493Scleropages_formosus
ENSNLEG00000012389SMARCA49484.951ENSSMAG00000003200smarca4a10079.483Scophthalmus_maximus
ENSNLEG00000012389SMARCA49479.135ENSSMAG00000014082-9680.428Scophthalmus_maximus
ENSNLEG00000012389SMARCA49481.307ENSSDUG00000017298smarca4a10078.466Seriola_dumerili
ENSNLEG00000012389SMARCA49482.991ENSSDUG00000005388-9980.760Seriola_dumerili
ENSNLEG00000012389SMARCA49483.583ENSSLDG00000023663-9783.766Seriola_lalandi_dorsalis
ENSNLEG00000012389SMARCA49484.137ENSSLDG00000024486smarca4a9986.128Seriola_lalandi_dorsalis
ENSNLEG00000012389SMARCA458100.000ENSSARG00000013477SMARCA479100.000Sorex_araneus
ENSNLEG00000012389SMARCA49885.988ENSSPUG00000004558SMARCA49888.551Sphenodon_punctatus
ENSNLEG00000012389SMARCA49580.377ENSSPAG00000012533-9580.211Stegastes_partitus
ENSNLEG00000012389SMARCA49483.736ENSSPAG00000004248smarca4a10081.038Stegastes_partitus
ENSNLEG00000012389SMARCA49893.449ENSSSCG00000013629SMARCA410093.449Sus_scrofa
ENSNLEG00000012389SMARCA45097.252ENSTGUG00000015488-9297.252Taeniopygia_guttata
ENSNLEG00000012389SMARCA49479.570ENSTRUG00000001378SMARCA49879.659Takifugu_rubripes
ENSNLEG00000012389SMARCA49181.246ENSTRUG00000004885smarca4a9981.109Takifugu_rubripes
ENSNLEG00000012389SMARCA47484.232ENSTNIG00000004859-9683.333Tetraodon_nigroviridis
ENSNLEG00000012389SMARCA49581.059ENSTNIG00000004536SMARCA49581.871Tetraodon_nigroviridis
ENSNLEG00000012389SMARCA451100.000ENSTBEG00000000707-53100.000Tupaia_belangeri
ENSNLEG00000012389SMARCA49692.231ENSTTRG00000009519SMARCA410089.934Tursiops_truncatus
ENSNLEG00000012389SMARCA49893.560ENSUAMG00000014661SMARCA410093.560Ursus_americanus
ENSNLEG00000012389SMARCA49993.082ENSUMAG00000022005SMARCA49895.096Ursus_maritimus
ENSNLEG00000012389SMARCA49993.600ENSVVUG00000017820SMARCA49893.600Vulpes_vulpes
ENSNLEG00000012389SMARCA49683.260ENSXETG00000009355smarca49986.413Xenopus_tropicalis
ENSNLEG00000012389SMARCA49479.439ENSXCOG00000013494-9486.677Xiphophorus_couchianus
ENSNLEG00000012389SMARCA49484.136ENSXMAG00000006321smarca4a9984.983Xiphophorus_maculatus
ENSNLEG00000012389SMARCA49481.514ENSXMAG00000007030-9581.246Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us