EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000012533 (Gene tree)
Gene ID: 100597051
Gene Symbol: EXOSC2
Alias: RRP4|Rrp4p|hRrp4p|p7
Full Name: exosome component 2
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 10443 bases
Position: chr8:109901857-109912299
Accession: 100597051
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000043785	ECR1_N	PF14382.6	4.3e-15	1	1
ENSNLEP00000045671	ECR1_N	PF14382.6	4.4e-15	1	1
ENSNLEP00000015236	ECR1_N	PF14382.6	5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000045753	EXOSC2-203	1599	XM_012509092	ENSNLEP00000043785	263 (aa)	XP_012364546	A0A2I3HJU2
ENSNLET00000038319	EXOSC2-202	1616	XM_003276738	ENSNLEP00000045671	267 (aa)	XP_003276786	A0A2I3HQB2
ENSNLET00000016004	EXOSC2-201	1698	XM_003276737	ENSNLEP00000015236	293 (aa)	XP_003276785	G1RPS2

Gene Model

Click here to download ENSNLEG00000012533's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000012533's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000012533	EXOSC2	100	100.000	ENSG00000130713	EXOSC2	100	100.000	Homo_sapiens
ENSNLEG00000012533	EXOSC2	95	75.269	ENSAPOG00000008861	exosc2	97	78.491	Acanthochromis_polyacanthus
ENSNLEG00000012533	EXOSC2	100	96.928	ENSAMEG00000016239	EXOSC2	100	96.928	Ailuropoda_melanoleuca
ENSNLEG00000012533	EXOSC2	100	77.474	ENSACIG00000019054	exosc2	100	77.474	Amphilophus_citrinellus
ENSNLEG00000012533	EXOSC2	100	77.474	ENSAOCG00000008577	exosc2	100	77.474	Amphiprion_ocellaris
ENSNLEG00000012533	EXOSC2	100	77.474	ENSAOCG00000004983	exosc2	100	77.474	Amphiprion_ocellaris
ENSNLEG00000012533	EXOSC2	100	77.474	ENSAPEG00000014088	exosc2	100	77.474	Amphiprion_percula
ENSNLEG00000012533	EXOSC2	100	78.498	ENSATEG00000018680	exosc2	100	78.498	Anabas_testudineus
ENSNLEG00000012533	EXOSC2	96	87.589	ENSAPLG00000012516	EXOSC2	97	87.589	Anas_platyrhynchos
ENSNLEG00000012533	EXOSC2	99	85.274	ENSACAG00000002706	EXOSC2	99	85.274	Anolis_carolinensis
ENSNLEG00000012533	EXOSC2	100	76.792	ENSACLG00000013613	exosc2	100	76.792	Astatotilapia_calliptera
ENSNLEG00000012533	EXOSC2	100	80.339	ENSAMXG00000042605	exosc2	100	80.339	Astyanax_mexicanus
ENSNLEG00000012533	EXOSC2	100	96.246	ENSBTAG00000048071	EXOSC2	100	96.246	Bos_taurus
ENSNLEG00000012533	EXOSC2	91	43.284	WBGene00022232	exos-2	88	43.284	Caenorhabditis_elegans
ENSNLEG00000012533	EXOSC2	100	99.317	ENSCJAG00000020537	EXOSC2	100	99.317	Callithrix_jacchus
ENSNLEG00000012533	EXOSC2	99	96.233	ENSCAFG00000019941	EXOSC2	99	96.233	Canis_familiaris
ENSNLEG00000012533	EXOSC2	100	96.246	ENSCAFG00020024047	EXOSC2	100	96.246	Canis_lupus_dingo
ENSNLEG00000012533	EXOSC2	100	96.246	ENSCHIG00000021398	EXOSC2	100	96.246	Capra_hircus
ENSNLEG00000012533	EXOSC2	100	95.563	ENSTSYG00000001805	EXOSC2	100	95.563	Carlito_syrichta
ENSNLEG00000012533	EXOSC2	100	91.809	ENSCPOG00000005902	EXOSC2	100	91.809	Cavia_porcellus
ENSNLEG00000012533	EXOSC2	100	99.317	ENSCCAG00000019749	EXOSC2	100	99.317	Cebus_capucinus
ENSNLEG00000012533	EXOSC2	100	99.317	ENSCATG00000025389	-	100	99.317	Cercocebus_atys
ENSNLEG00000012533	EXOSC2	100	96.587	ENSCLAG00000006195	EXOSC2	100	96.761	Chinchilla_lanigera
ENSNLEG00000012533	EXOSC2	100	99.317	ENSCSAG00000014760	EXOSC2	100	99.317	Chlorocebus_sabaeus
ENSNLEG00000012533	EXOSC2	100	97.270	ENSCHOG00000000858	EXOSC2	100	97.270	Choloepus_hoffmanni
ENSNLEG00000012533	EXOSC2	99	86.986	ENSCPBG00000022626	EXOSC2	99	86.986	Chrysemys_picta_bellii
ENSNLEG00000012533	EXOSC2	96	61.672	ENSCING00000014934	-	94	61.672	Ciona_intestinalis
ENSNLEG00000012533	EXOSC2	92	61.957	ENSCSAVG00000003684	-	100	61.957	Ciona_savignyi
ENSNLEG00000012533	EXOSC2	100	99.317	ENSCANG00000039828	-	100	99.317	Colobus_angolensis_palliatus
ENSNLEG00000012533	EXOSC2	99	92.123	ENSCANG00000029298	-	99	92.123	Colobus_angolensis_palliatus
ENSNLEG00000012533	EXOSC2	100	95.222	ENSCGRG00001013981	Exosc2	100	95.222	Cricetulus_griseus_chok1gshd
ENSNLEG00000012533	EXOSC2	100	95.222	ENSCGRG00000017629	Exosc2	100	95.222	Cricetulus_griseus_crigri
ENSNLEG00000012533	EXOSC2	100	76.792	ENSCSEG00000016539	exosc2	100	76.792	Cynoglossus_semilaevis
ENSNLEG00000012533	EXOSC2	100	76.451	ENSCVAG00000022260	exosc2	100	76.451	Cyprinodon_variegatus
ENSNLEG00000012533	EXOSC2	100	77.966	ENSDARG00000028688	exosc2	100	77.966	Danio_rerio
ENSNLEG00000012533	EXOSC2	91	97.378	ENSDNOG00000025767	-	100	97.378	Dasypus_novemcinctus
ENSNLEG00000012533	EXOSC2	100	93.857	ENSDORG00000009238	Exosc2	100	93.857	Dipodomys_ordii
ENSNLEG00000012533	EXOSC2	89	61.450	FBgn0034879	Rrp4	89	61.132	Drosophila_melanogaster
ENSNLEG00000012533	EXOSC2	94	78.623	ENSETEG00000016130	-	99	78.623	Echinops_telfairi
ENSNLEG00000012533	EXOSC2	100	97.270	ENSEASG00005008475	EXOSC2	86	97.270	Equus_asinus_asinus
ENSNLEG00000012533	EXOSC2	100	97.270	ENSECAG00000007897	EXOSC2	86	97.270	Equus_caballus
ENSNLEG00000012533	EXOSC2	100	78.644	ENSELUG00000013641	exosc2	100	78.644	Esox_lucius
ENSNLEG00000012533	EXOSC2	100	96.928	ENSFCAG00000025936	EXOSC2	100	96.928	Felis_catus
ENSNLEG00000012533	EXOSC2	98	83.275	ENSFALG00000001446	EXOSC2	98	83.275	Ficedula_albicollis
ENSNLEG00000012533	EXOSC2	100	95.563	ENSFDAG00000017196	EXOSC2	100	95.563	Fukomys_damarensis
ENSNLEG00000012533	EXOSC2	100	77.133	ENSFHEG00000018571	exosc2	100	77.133	Fundulus_heteroclitus
ENSNLEG00000012533	EXOSC2	100	73.379	ENSGMOG00000011785	exosc2	99	73.379	Gadus_morhua
ENSNLEG00000012533	EXOSC2	99	85.616	ENSGALG00000040373	EXOSC2	99	85.616	Gallus_gallus
ENSNLEG00000012533	EXOSC2	99	76.027	ENSGAFG00000010283	exosc2	99	76.027	Gambusia_affinis
ENSNLEG00000012533	EXOSC2	100	75.427	ENSGACG00000016805	exosc2	99	75.904	Gasterosteus_aculeatus
ENSNLEG00000012533	EXOSC2	87	90.196	ENSGAGG00000021026	EXOSC2	96	90.196	Gopherus_agassizii
ENSNLEG00000012533	EXOSC2	100	99.317	ENSGGOG00000010578	EXOSC2	100	99.317	Gorilla_gorilla
ENSNLEG00000012533	EXOSC2	100	77.474	ENSHBUG00000022437	exosc2	100	77.474	Haplochromis_burtoni
ENSNLEG00000012533	EXOSC2	100	96.928	ENSHGLG00000012834	EXOSC2	100	97.166	Heterocephalus_glaber_female
ENSNLEG00000012533	EXOSC2	100	96.928	ENSHGLG00100007092	EXOSC2	100	97.166	Heterocephalus_glaber_male
ENSNLEG00000012533	EXOSC2	100	75.427	ENSHCOG00000019130	exosc2	100	75.427	Hippocampus_comes
ENSNLEG00000012533	EXOSC2	100	77.891	ENSIPUG00000015397	exosc2	100	77.891	Ictalurus_punctatus
ENSNLEG00000012533	EXOSC2	100	96.246	ENSSTOG00000005999	EXOSC2	100	96.246	Ictidomys_tridecemlineatus
ENSNLEG00000012533	EXOSC2	100	95.222	ENSJJAG00000003188	Exosc2	100	95.222	Jaculus_jaculus
ENSNLEG00000012533	EXOSC2	99	77.397	ENSKMAG00000017397	exosc2	99	77.397	Kryptolebias_marmoratus
ENSNLEG00000012533	EXOSC2	100	76.792	ENSLBEG00000019269	exosc2	100	76.792	Labrus_bergylta
ENSNLEG00000012533	EXOSC2	100	83.673	ENSLACG00000015530	EXOSC2	100	83.673	Latimeria_chalumnae
ENSNLEG00000012533	EXOSC2	100	97.279	ENSLAFG00000006984	EXOSC2	100	97.279	Loxodonta_africana
ENSNLEG00000012533	EXOSC2	100	85.666	ENSMFAG00000034160	-	84	85.666	Macaca_fascicularis
ENSNLEG00000012533	EXOSC2	100	99.317	ENSMFAG00000000597	-	100	99.317	Macaca_fascicularis
ENSNLEG00000012533	EXOSC2	100	98.876	ENSMMUG00000012498	EXOSC2	100	98.876	Macaca_mulatta
ENSNLEG00000012533	EXOSC2	100	86.689	ENSMNEG00000028704	-	91	86.689	Macaca_nemestrina
ENSNLEG00000012533	EXOSC2	100	99.317	ENSMNEG00000031861	-	100	99.317	Macaca_nemestrina
ENSNLEG00000012533	EXOSC2	100	85.666	ENSMLEG00000029891	-	91	85.666	Mandrillus_leucophaeus
ENSNLEG00000012533	EXOSC2	100	99.317	ENSMLEG00000042587	-	100	99.317	Mandrillus_leucophaeus
ENSNLEG00000012533	EXOSC2	100	77.816	ENSMAMG00000012466	exosc2	100	77.816	Mastacembelus_armatus
ENSNLEG00000012533	EXOSC2	100	76.451	ENSMZEG00005018737	exosc2	100	76.451	Maylandia_zebra
ENSNLEG00000012533	EXOSC2	99	85.616	ENSMGAG00000005450	EXOSC2	99	85.616	Meleagris_gallopavo
ENSNLEG00000012533	EXOSC2	100	94.881	ENSMAUG00000008299	Exosc2	100	94.881	Mesocricetus_auratus
ENSNLEG00000012533	EXOSC2	100	97.611	ENSMICG00000015495	EXOSC2	100	97.611	Microcebus_murinus
ENSNLEG00000012533	EXOSC2	100	94.881	ENSMOCG00000008262	Exosc2	100	94.881	Microtus_ochrogaster
ENSNLEG00000012533	EXOSC2	100	78.157	ENSMMOG00000009616	exosc2	100	78.157	Mola_mola
ENSNLEG00000012533	EXOSC2	100	92.833	ENSMODG00000012114	EXOSC2	100	92.833	Monodelphis_domestica
ENSNLEG00000012533	EXOSC2	100	77.474	ENSMALG00000022132	exosc2	100	77.474	Monopterus_albus
ENSNLEG00000012533	EXOSC2	100	93.857	MGP_CAROLIEiJ_G0023415	Exosc2	100	94.595	Mus_caroli
ENSNLEG00000012533	EXOSC2	100	93.857	ENSMUSG00000039356	Exosc2	100	94.595	Mus_musculus
ENSNLEG00000012533	EXOSC2	100	94.198	MGP_PahariEiJ_G0024872	Exosc2	100	94.595	Mus_pahari
ENSNLEG00000012533	EXOSC2	100	93.857	MGP_SPRETEiJ_G0024332	Exosc2	100	94.595	Mus_spretus
ENSNLEG00000012533	EXOSC2	100	96.246	ENSMPUG00000012686	EXOSC2	100	96.246	Mustela_putorius_furo
ENSNLEG00000012533	EXOSC2	100	96.949	ENSMLUG00000008776	EXOSC2	100	96.949	Myotis_lucifugus
ENSNLEG00000012533	EXOSC2	100	95.222	ENSNGAG00000019383	Exosc2	100	95.222	Nannospalax_galili
ENSNLEG00000012533	EXOSC2	100	77.133	ENSNBRG00000005453	exosc2	100	77.133	Neolamprologus_brichardi
ENSNLEG00000012533	EXOSC2	100	72.014	ENSMEUG00000000795	EXOSC2	100	72.014	Notamacropus_eugenii
ENSNLEG00000012533	EXOSC2	65	96.970	ENSOPRG00000008688	EXOSC2	65	96.970	Ochotona_princeps
ENSNLEG00000012533	EXOSC2	87	93.701	ENSODEG00000019513	-	100	93.701	Octodon_degus
ENSNLEG00000012533	EXOSC2	100	93.174	ENSODEG00000016880	-	100	93.174	Octodon_degus
ENSNLEG00000012533	EXOSC2	100	77.133	ENSONIG00000014086	exosc2	100	77.133	Oreochromis_niloticus
ENSNLEG00000012533	EXOSC2	100	84.642	ENSOANG00000001044	EXOSC2	100	84.642	Ornithorhynchus_anatinus
ENSNLEG00000012533	EXOSC2	100	95.222	ENSOCUG00000007138	EXOSC2	100	95.222	Oryctolagus_cuniculus
ENSNLEG00000012533	EXOSC2	100	77.474	ENSORLG00000007443	exosc2	100	77.474	Oryzias_latipes
ENSNLEG00000012533	EXOSC2	100	77.133	ENSORLG00020018902	exosc2	100	77.133	Oryzias_latipes_hni
ENSNLEG00000012533	EXOSC2	100	77.474	ENSORLG00015006767	exosc2	100	77.474	Oryzias_latipes_hsok
ENSNLEG00000012533	EXOSC2	100	76.451	ENSOMEG00000003533	exosc2	100	76.451	Oryzias_melastigma
ENSNLEG00000012533	EXOSC2	100	97.952	ENSOGAG00000007558	EXOSC2	100	97.952	Otolemur_garnettii
ENSNLEG00000012533	EXOSC2	100	95.932	ENSOARG00000007438	EXOSC2	100	95.932	Ovis_aries
ENSNLEG00000012533	EXOSC2	100	100.000	ENSPPAG00000034796	EXOSC2	100	100.000	Pan_paniscus
ENSNLEG00000012533	EXOSC2	100	96.587	ENSPPRG00000001089	EXOSC2	100	96.587	Panthera_pardus
ENSNLEG00000012533	EXOSC2	100	96.587	ENSPTIG00000021163	EXOSC2	100	96.587	Panthera_tigris_altaica
ENSNLEG00000012533	EXOSC2	100	100.000	ENSPTRG00000045766	-	100	100.000	Pan_troglodytes
ENSNLEG00000012533	EXOSC2	100	100.000	ENSPTRG00000021476	EXOSC2	100	100.000	Pan_troglodytes
ENSNLEG00000012533	EXOSC2	100	99.317	ENSPANG00000025966	EXOSC2	100	99.317	Papio_anubis
ENSNLEG00000012533	EXOSC2	99	80.277	ENSPKIG00000004271	exosc2	98	80.277	Paramormyrops_kingsleyae
ENSNLEG00000012533	EXOSC2	99	87.671	ENSPSIG00000006743	EXOSC2	99	87.671	Pelodiscus_sinensis
ENSNLEG00000012533	EXOSC2	86	79.051	ENSPMGG00000010980	exosc2	99	79.051	Periophthalmus_magnuspinnatus
ENSNLEG00000012533	EXOSC2	100	94.881	ENSPEMG00000006345	Exosc2	100	94.881	Peromyscus_maniculatus_bairdii
ENSNLEG00000012533	EXOSC2	100	76.271	ENSPMAG00000001280	exosc2	100	76.271	Petromyzon_marinus
ENSNLEG00000012533	EXOSC2	100	93.174	ENSPCIG00000024122	EXOSC2	97	93.174	Phascolarctos_cinereus
ENSNLEG00000012533	EXOSC2	99	76.451	ENSPFOG00000019819	exosc2	99	76.451	Poecilia_formosa
ENSNLEG00000012533	EXOSC2	99	76.712	ENSPLAG00000004605	exosc2	99	76.712	Poecilia_latipinna
ENSNLEG00000012533	EXOSC2	99	76.712	ENSPMEG00000010976	exosc2	99	76.712	Poecilia_mexicana
ENSNLEG00000012533	EXOSC2	99	76.370	ENSPREG00000014306	exosc2	99	76.370	Poecilia_reticulata
ENSNLEG00000012533	EXOSC2	100	99.659	ENSPPYG00000019695	EXOSC2	100	99.659	Pongo_abelii
ENSNLEG00000012533	EXOSC2	100	96.928	ENSPCAG00000013400	EXOSC2	100	96.928	Procavia_capensis
ENSNLEG00000012533	EXOSC2	100	97.952	ENSPCOG00000017639	EXOSC2	100	97.952	Propithecus_coquereli
ENSNLEG00000012533	EXOSC2	100	95.563	ENSPVAG00000001513	EXOSC2	100	95.563	Pteropus_vampyrus
ENSNLEG00000012533	EXOSC2	100	77.474	ENSPNYG00000007383	exosc2	100	77.474	Pundamilia_nyererei
ENSNLEG00000012533	EXOSC2	100	80.272	ENSPNAG00000014281	exosc2	100	80.272	Pygocentrus_nattereri
ENSNLEG00000012533	EXOSC2	100	94.881	ENSRNOG00000009245	Exosc2	100	94.881	Rattus_norvegicus
ENSNLEG00000012533	EXOSC2	99	92.808	ENSRBIG00000029791	-	99	92.808	Rhinopithecus_bieti
ENSNLEG00000012533	EXOSC2	100	98.976	ENSRBIG00000031203	-	100	98.976	Rhinopithecus_bieti
ENSNLEG00000012533	EXOSC2	100	98.976	ENSRROG00000010827	-	100	98.976	Rhinopithecus_roxellana
ENSNLEG00000012533	EXOSC2	99	91.096	ENSRROG00000043609	-	99	91.096	Rhinopithecus_roxellana
ENSNLEG00000012533	EXOSC2	89	41.554	YHR069C	-	82	41.554	Saccharomyces_cerevisiae
ENSNLEG00000012533	EXOSC2	100	98.976	ENSSBOG00000022712	EXOSC2	100	98.976	Saimiri_boliviensis_boliviensis
ENSNLEG00000012533	EXOSC2	100	92.150	ENSSHAG00000016050	EXOSC2	100	92.150	Sarcophilus_harrisii
ENSNLEG00000012533	EXOSC2	100	78.840	ENSSFOG00015011245	exosc2	100	78.840	Scleropages_formosus
ENSNLEG00000012533	EXOSC2	100	76.792	ENSSMAG00000003112	exosc2	100	76.792	Scophthalmus_maximus
ENSNLEG00000012533	EXOSC2	100	76.689	ENSSDUG00000004634	exosc2	100	76.689	Seriola_dumerili
ENSNLEG00000012533	EXOSC2	100	77.474	ENSSLDG00000010616	exosc2	100	77.474	Seriola_lalandi_dorsalis
ENSNLEG00000012533	EXOSC2	99	87.119	ENSSPUG00000013391	EXOSC2	99	87.119	Sphenodon_punctatus
ENSNLEG00000012533	EXOSC2	100	77.474	ENSSPAG00000022947	exosc2	100	77.474	Stegastes_partitus
ENSNLEG00000012533	EXOSC2	100	97.952	ENSSSCG00000005704	EXOSC2	100	97.952	Sus_scrofa
ENSNLEG00000012533	EXOSC2	99	82.534	ENSTGUG00000004697	EXOSC2	99	82.534	Taeniopygia_guttata
ENSNLEG00000012533	EXOSC2	100	73.720	ENSTRUG00000022436	exosc2	100	73.720	Takifugu_rubripes
ENSNLEG00000012533	EXOSC2	100	89.761	ENSTTRG00000015159	EXOSC2	100	89.761	Tursiops_truncatus
ENSNLEG00000012533	EXOSC2	95	93.863	ENSUAMG00000009651	EXOSC2	99	93.863	Ursus_americanus
ENSNLEG00000012533	EXOSC2	100	96.587	ENSUMAG00000018726	EXOSC2	100	96.587	Ursus_maritimus
ENSNLEG00000012533	EXOSC2	100	96.246	ENSVVUG00000027665	EXOSC2	100	96.246	Vulpes_vulpes
ENSNLEG00000012533	EXOSC2	100	79.522	ENSXETG00000001340	exosc2	100	79.522	Xenopus_tropicalis
ENSNLEG00000012533	EXOSC2	99	76.712	ENSXMAG00000005265	exosc2	99	76.712	Xiphophorus_maculatus