EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000012839 (Gene tree)
Gene ID: 100606513
Gene Symbol: SETX
Alias: ALS4|AOA2|KIAA0625|SCAR1|Sen1
Full Name: senataxin
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 101653 bases
Position: chr8:111510682-111612334
Accession: 100606513
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000015591	UvrD-helicase	PF00580.21	0.0001	1	1
ENSNLEP00000031495	UvrD-helicase	PF00580.21	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000040049	SETX-202	7710	XM_012508699	ENSNLEP00000031495	2569 (aa)	XP_012364153	A0A2I3GJL3
ENSNLET00000016384	SETX-201	7731	-	ENSNLEP00000015591	2576 (aa)	-	G1RQS7

Gene Model

Click here to download ENSNLEG00000012839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000012839's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000012839	SETX	100	93.150	ENSG00000107290	SETX	99	93.150	Homo_sapiens
ENSNLEG00000012839	SETX	72	42.536	ENSAMXG00000014406	-	84	42.536	Astyanax_mexicanus
ENSNLEG00000012839	SETX	100	84.395	ENSCJAG00000018245	SETX	100	84.395	Callithrix_jacchus
ENSNLEG00000012839	SETX	99	71.509	ENSCPOG00000001492	SETX	100	69.915	Cavia_porcellus
ENSNLEG00000012839	SETX	97	70.617	ENSCLAG00000012582	SETX	99	70.617	Chinchilla_lanigera
ENSNLEG00000012839	SETX	73	89.126	ENSETEG00000008111	-	72	89.126	Echinops_telfairi
ENSNLEG00000012839	SETX	93	81.168	ENSECAG00000012019	SETX	99	81.209	Equus_caballus
ENSNLEG00000012839	SETX	80	42.479	ENSELUG00000022536	-	75	42.479	Esox_lucius
ENSNLEG00000012839	SETX	100	76.980	ENSFCAG00000007102	SETX	99	76.980	Felis_catus
ENSNLEG00000012839	SETX	82	65.527	ENSFALG00000001464	SETX	89	65.527	Ficedula_albicollis
ENSNLEG00000012839	SETX	100	91.552	ENSGGOG00000027664	SETX	99	91.552	Gorilla_gorilla
ENSNLEG00000012839	SETX	69	44.608	ENSIPUG00000006685	setx	77	44.608	Ictalurus_punctatus
ENSNLEG00000012839	SETX	82	54.698	ENSLOCG00000004264	SETX	88	55.034	Lepisosteus_oculatus
ENSNLEG00000012839	SETX	99	66.922	ENSMOCG00000000848	Setx	99	65.234	Microtus_ochrogaster
ENSNLEG00000012839	SETX	100	71.440	MGP_PahariEiJ_G0024821	Setx	99	71.519	Mus_pahari
ENSNLEG00000012839	SETX	91	73.252	ENSOCUG00000005616	SETX	93	73.252	Oryctolagus_cuniculus
ENSNLEG00000012839	SETX	99	76.399	ENSOGAG00000013387	SETX	99	76.399	Otolemur_garnettii
ENSNLEG00000012839	SETX	100	93.813	ENSPPAG00000004108	SETX	98	93.813	Pan_paniscus
ENSNLEG00000012839	SETX	100	76.745	ENSPPRG00000012867	SETX	99	76.745	Panthera_pardus
ENSNLEG00000012839	SETX	100	77.601	ENSPTIG00000021101	SETX	98	77.601	Panthera_tigris_altaica
ENSNLEG00000012839	SETX	100	93.773	ENSPTRG00000021495	SETX	98	93.773	Pan_troglodytes
ENSNLEG00000012839	SETX	82	48.270	ENSPKIG00000025162	SETX	81	48.600	Paramormyrops_kingsleyae
ENSNLEG00000012839	SETX	60	93.103	ENSSARG00000002336	-	63	93.103	Sorex_araneus
ENSNLEG00000012839	SETX	85	65.630	ENSSPUG00000016332	SETX	83	65.630	Sphenodon_punctatus
ENSNLEG00000012839	SETX	97	86.429	ENSSSCG00000005724	SETX	99	74.628	Sus_scrofa
ENSNLEG00000012839	SETX	70	70.167	ENSTGUG00000005117	SETX	86	70.167	Taeniopygia_guttata
ENSNLEG00000012839	SETX	82	61.960	ENSXETG00000006254	setx	95	61.960	Xenopus_tropicalis