EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000013288 (Gene tree)
Gene ID: 100607197
Gene Symbol: SBDS
Alias: CGI-97|FLJ10917|SDS|SWDS
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 6744 bases
Position: chr17:47094701-47101444
Accession: 100607197
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000016133	SBDS	PF01172.18	9e-33	1	1
ENSNLEP00000043615	SBDS	PF01172.18	9.2e-26	1	1
ENSNLEP00000016133	SBDS_C	PF09377.10	3.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000047123	SBDS-202	294	-	ENSNLEP00000043615	97 (aa)	-	A0A2I3HJC2
ENSNLET00000016956	SBDS-201	1699	XM_003276052	ENSNLEP00000016133	250 (aa)	XP_003276100	G1RSB1

Gene Model

Click here to download ENSNLEG00000013288's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000013288's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000013288	SBDS	100	100.000	ENSG00000126524	SBDS	100	100.000	Homo_sapiens
ENSNLEG00000013288	SBDS	99	83.133	ENSAPOG00000014285	sbds	100	83.133	Acanthochromis_polyacanthus
ENSNLEG00000013288	SBDS	100	98.800	ENSAMEG00000018167	SBDS	100	98.800	Ailuropoda_melanoleuca
ENSNLEG00000013288	SBDS	99	82.540	ENSACIG00000007308	sbds	100	82.540	Amphilophus_citrinellus
ENSNLEG00000013288	SBDS	99	83.133	ENSAOCG00000016770	sbds	100	83.133	Amphiprion_ocellaris
ENSNLEG00000013288	SBDS	99	83.534	ENSAPEG00000015897	sbds	100	83.534	Amphiprion_percula
ENSNLEG00000013288	SBDS	99	83.534	ENSATEG00000006901	sbds	100	83.534	Anabas_testudineus
ENSNLEG00000013288	SBDS	83	99.517	ENSANAG00000037501	-	100	99.517	Aotus_nancymaae
ENSNLEG00000013288	SBDS	92	92.641	ENSANAG00000024342	-	97	92.641	Aotus_nancymaae
ENSNLEG00000013288	SBDS	99	83.936	ENSACLG00000018750	sbds	100	83.936	Astatotilapia_calliptera
ENSNLEG00000013288	SBDS	100	84.400	ENSAMXG00000005361	sbds	100	84.400	Astyanax_mexicanus
ENSNLEG00000013288	SBDS	100	98.800	ENSBTAG00000004051	SBDS	100	98.800	Bos_taurus
ENSNLEG00000013288	SBDS	87	76.190	WBGene00021063	sbds-1	97	56.911	Caenorhabditis_elegans
ENSNLEG00000013288	SBDS	100	98.800	ENSCJAG00000041007	SBDS	100	98.800	Callithrix_jacchus
ENSNLEG00000013288	SBDS	100	96.825	ENSCAFG00000010797	SBDS	100	96.825	Canis_familiaris
ENSNLEG00000013288	SBDS	100	99.200	ENSCAFG00020005357	SBDS	100	99.200	Canis_lupus_dingo
ENSNLEG00000013288	SBDS	100	99.600	ENSCHIG00000026854	SBDS	100	99.600	Capra_hircus
ENSNLEG00000013288	SBDS	100	100.000	ENSTSYG00000033822	SBDS	100	100.000	Carlito_syrichta
ENSNLEG00000013288	SBDS	66	97.561	ENSCAPG00000006634	SBDS	100	97.561	Cavia_aperea
ENSNLEG00000013288	SBDS	100	98.400	ENSCPOG00000036143	SBDS	100	98.400	Cavia_porcellus
ENSNLEG00000013288	SBDS	100	99.600	ENSCCAG00000020671	SBDS	100	99.600	Cebus_capucinus
ENSNLEG00000013288	SBDS	100	100.000	ENSCATG00000039026	SBDS	100	100.000	Cercocebus_atys
ENSNLEG00000013288	SBDS	99	70.968	ENSCLAG00000002113	-	99	70.968	Chinchilla_lanigera
ENSNLEG00000013288	SBDS	100	98.000	ENSCLAG00000005721	-	100	98.000	Chinchilla_lanigera
ENSNLEG00000013288	SBDS	100	100.000	ENSCSAG00000018275	SBDS	100	100.000	Chlorocebus_sabaeus
ENSNLEG00000013288	SBDS	100	94.400	ENSCHOG00000003795	SBDS	100	94.400	Choloepus_hoffmanni
ENSNLEG00000013288	SBDS	100	89.600	ENSCPBG00000014893	SBDS	100	89.600	Chrysemys_picta_bellii
ENSNLEG00000013288	SBDS	91	75.000	ENSCSAVG00000011811	-	100	66.800	Ciona_savignyi
ENSNLEG00000013288	SBDS	100	99.600	ENSCANG00000032368	SBDS	100	99.600	Colobus_angolensis_palliatus
ENSNLEG00000013288	SBDS	86	100.000	ENSCGRG00001000088	-	82	100.000	Cricetulus_griseus_chok1gshd
ENSNLEG00000013288	SBDS	66	95.122	ENSCGRG00001019886	Sbds	100	95.122	Cricetulus_griseus_chok1gshd
ENSNLEG00000013288	SBDS	83	96.135	ENSCGRG00000009211	Sbds	100	96.135	Cricetulus_griseus_crigri
ENSNLEG00000013288	SBDS	99	81.526	ENSCSEG00000005798	sbds	100	81.526	Cynoglossus_semilaevis
ENSNLEG00000013288	SBDS	99	81.526	ENSCVAG00000001053	sbds	100	81.526	Cyprinodon_variegatus
ENSNLEG00000013288	SBDS	100	84.000	ENSDARG00000027803	sbds	100	84.000	Danio_rerio
ENSNLEG00000013288	SBDS	100	98.800	ENSDNOG00000041174	SBDS	100	98.800	Dasypus_novemcinctus
ENSNLEG00000013288	SBDS	100	96.000	ENSDORG00000026218	Sbds	100	96.000	Dipodomys_ordii
ENSNLEG00000013288	SBDS	89	73.256	FBgn0035714	CG8549	99	59.036	Drosophila_melanogaster
ENSNLEG00000013288	SBDS	93	57.940	ENSEBUG00000015780	sbds	92	63.768	Eptatretus_burgeri
ENSNLEG00000013288	SBDS	100	99.600	ENSEASG00005008821	SBDS	100	99.600	Equus_asinus_asinus
ENSNLEG00000013288	SBDS	100	99.600	ENSECAG00000008202	SBDS	100	99.600	Equus_caballus
ENSNLEG00000013288	SBDS	83	76.442	ENSEEUG00000004768	SBDS	100	76.442	Erinaceus_europaeus
ENSNLEG00000013288	SBDS	100	82.000	ENSELUG00000008382	sbds	100	82.000	Esox_lucius
ENSNLEG00000013288	SBDS	100	99.200	ENSFCAG00000022142	SBDS	100	99.200	Felis_catus
ENSNLEG00000013288	SBDS	100	89.200	ENSFALG00000013808	SBDS	100	89.200	Ficedula_albicollis
ENSNLEG00000013288	SBDS	100	98.400	ENSFDAG00000018947	-	100	98.400	Fukomys_damarensis
ENSNLEG00000013288	SBDS	99	78.313	ENSFHEG00000000708	sbds	100	78.313	Fundulus_heteroclitus
ENSNLEG00000013288	SBDS	100	84.000	ENSGMOG00000018356	sbds	99	84.000	Gadus_morhua
ENSNLEG00000013288	SBDS	100	89.200	ENSGALG00000027989	SBDS	100	89.200	Gallus_gallus
ENSNLEG00000013288	SBDS	92	78.261	ENSGAFG00000014204	sbds	100	78.261	Gambusia_affinis
ENSNLEG00000013288	SBDS	99	82.329	ENSGACG00000012697	sbds	100	82.329	Gasterosteus_aculeatus
ENSNLEG00000013288	SBDS	86	89.720	ENSGAGG00000022402	SBDS	100	89.720	Gopherus_agassizii
ENSNLEG00000013288	SBDS	89	100.000	ENSGGOG00000001472	-	86	100.000	Gorilla_gorilla
ENSNLEG00000013288	SBDS	96	79.668	ENSGGOG00000040023	-	92	79.668	Gorilla_gorilla
ENSNLEG00000013288	SBDS	99	83.936	ENSHBUG00000002660	sbds	100	83.936	Haplochromis_burtoni
ENSNLEG00000013288	SBDS	100	96.800	ENSHGLG00000009671	SBDS	100	96.800	Heterocephalus_glaber_female
ENSNLEG00000013288	SBDS	100	96.800	ENSHGLG00100011332	SBDS	100	96.800	Heterocephalus_glaber_male
ENSNLEG00000013288	SBDS	99	81.526	ENSHCOG00000018606	sbds	100	81.526	Hippocampus_comes
ENSNLEG00000013288	SBDS	100	85.200	ENSIPUG00000006536	sbds	100	85.200	Ictalurus_punctatus
ENSNLEG00000013288	SBDS	88	98.824	ENSSTOG00000022203	-	90	98.824	Ictidomys_tridecemlineatus
ENSNLEG00000013288	SBDS	91	84.091	ENSJJAG00000013791	-	100	87.619	Jaculus_jaculus
ENSNLEG00000013288	SBDS	100	82.353	ENSJJAG00000003934	-	100	70.356	Jaculus_jaculus
ENSNLEG00000013288	SBDS	100	94.400	ENSJJAG00000012033	-	100	94.400	Jaculus_jaculus
ENSNLEG00000013288	SBDS	99	83.936	ENSKMAG00000018542	sbds	100	83.936	Kryptolebias_marmoratus
ENSNLEG00000013288	SBDS	99	80.321	ENSLBEG00000016687	sbds	100	80.321	Labrus_bergylta
ENSNLEG00000013288	SBDS	100	70.472	ENSLACG00000018916	SBDS	100	70.472	Latimeria_chalumnae
ENSNLEG00000013288	SBDS	100	87.600	ENSLOCG00000004073	sbds	100	87.600	Lepisosteus_oculatus
ENSNLEG00000013288	SBDS	100	98.000	ENSLAFG00000008763	SBDS	100	98.000	Loxodonta_africana
ENSNLEG00000013288	SBDS	100	100.000	ENSMFAG00000032620	SBDS	100	100.000	Macaca_fascicularis
ENSNLEG00000013288	SBDS	100	100.000	ENSMMUG00000045653	SBDS	100	100.000	Macaca_mulatta
ENSNLEG00000013288	SBDS	100	100.000	ENSMNEG00000031523	SBDS	100	100.000	Macaca_nemestrina
ENSNLEG00000013288	SBDS	91	89.130	ENSMLEG00000036826	SBDS	100	75.197	Mandrillus_leucophaeus
ENSNLEG00000013288	SBDS	99	83.133	ENSMAMG00000016062	sbds	100	83.133	Mastacembelus_armatus
ENSNLEG00000013288	SBDS	99	83.936	ENSMZEG00005024385	sbds	100	83.936	Maylandia_zebra
ENSNLEG00000013288	SBDS	100	89.200	ENSMGAG00000002119	SBDS	100	89.200	Meleagris_gallopavo
ENSNLEG00000013288	SBDS	89	100.000	ENSMAUG00000004862	-	78	100.000	Mesocricetus_auratus
ENSNLEG00000013288	SBDS	99	76.707	ENSMAUG00000022214	-	100	76.707	Mesocricetus_auratus
ENSNLEG00000013288	SBDS	100	99.200	ENSMICG00000014366	SBDS	100	99.200	Microcebus_murinus
ENSNLEG00000013288	SBDS	100	97.600	ENSMOCG00000011739	Sbds	100	97.600	Microtus_ochrogaster
ENSNLEG00000013288	SBDS	91	82.955	ENSMMOG00000005061	sbds	100	73.200	Mola_mola
ENSNLEG00000013288	SBDS	100	96.800	ENSMODG00000006644	SBDS	100	96.800	Monodelphis_domestica
ENSNLEG00000013288	SBDS	99	83.133	ENSMALG00000010219	sbds	100	83.133	Monopterus_albus
ENSNLEG00000013288	SBDS	100	97.600	MGP_CAROLIEiJ_G0027800	Sbds	100	97.674	Mus_caroli
ENSNLEG00000013288	SBDS	100	97.200	ENSMUSG00000025337	Sbds	100	97.674	Mus_musculus
ENSNLEG00000013288	SBDS	100	97.200	MGP_PahariEiJ_G0024384	Sbds	100	97.674	Mus_pahari
ENSNLEG00000013288	SBDS	100	97.200	MGP_SPRETEiJ_G0028798	Sbds	100	97.674	Mus_spretus
ENSNLEG00000013288	SBDS	67	93.452	ENSMPUG00000016192	SBDS	97	93.452	Mustela_putorius_furo
ENSNLEG00000013288	SBDS	73	97.253	ENSMLUG00000013575	SBDS	100	97.253	Myotis_lucifugus
ENSNLEG00000013288	SBDS	100	97.600	ENSNGAG00000012093	Sbds	100	97.600	Nannospalax_galili
ENSNLEG00000013288	SBDS	99	83.936	ENSNBRG00000017027	sbds	100	83.936	Neolamprologus_brichardi
ENSNLEG00000013288	SBDS	100	96.000	ENSOPRG00000008721	SBDS	100	96.000	Ochotona_princeps
ENSNLEG00000013288	SBDS	100	88.000	ENSODEG00000019253	-	84	88.000	Octodon_degus
ENSNLEG00000013288	SBDS	90	97.701	ENSODEG00000015687	-	83	100.000	Octodon_degus
ENSNLEG00000013288	SBDS	99	72.289	ENSODEG00000000137	-	85	75.600	Octodon_degus
ENSNLEG00000013288	SBDS	99	77.510	ENSODEG00000001116	-	99	77.510	Octodon_degus
ENSNLEG00000013288	SBDS	99	83.133	ENSONIG00000005874	sbds	100	83.133	Oreochromis_niloticus
ENSNLEG00000013288	SBDS	83	92.754	ENSOANG00000007674	-	100	92.754	Ornithorhynchus_anatinus
ENSNLEG00000013288	SBDS	100	97.600	ENSOCUG00000003170	SBDS	100	97.600	Oryctolagus_cuniculus
ENSNLEG00000013288	SBDS	99	80.321	ENSORLG00000023489	sbds	100	80.321	Oryzias_latipes
ENSNLEG00000013288	SBDS	99	79.920	ENSORLG00020019282	sbds	100	79.920	Oryzias_latipes_hni
ENSNLEG00000013288	SBDS	99	79.920	ENSORLG00015008005	sbds	100	79.920	Oryzias_latipes_hsok
ENSNLEG00000013288	SBDS	99	80.723	ENSOMEG00000022747	sbds	100	80.723	Oryzias_melastigma
ENSNLEG00000013288	SBDS	100	98.400	ENSOGAG00000009011	-	100	98.400	Otolemur_garnettii
ENSNLEG00000013288	SBDS	100	82.000	ENSOGAG00000015036	-	100	82.000	Otolemur_garnettii
ENSNLEG00000013288	SBDS	100	99.600	ENSOARG00000010609	SBDS	100	99.600	Ovis_aries
ENSNLEG00000013288	SBDS	100	99.200	ENSPPAG00000043889	-	100	99.200	Pan_paniscus
ENSNLEG00000013288	SBDS	100	99.200	ENSPPRG00000002307	SBDS	100	99.200	Panthera_pardus
ENSNLEG00000013288	SBDS	100	99.200	ENSPTIG00000021308	SBDS	100	99.200	Panthera_tigris_altaica
ENSNLEG00000013288	SBDS	100	85.200	ENSPTRG00000050835	-	100	85.200	Pan_troglodytes
ENSNLEG00000013288	SBDS	100	84.800	ENSPTRG00000047744	-	100	84.800	Pan_troglodytes
ENSNLEG00000013288	SBDS	100	100.000	ENSPTRG00000019254	SBDS	100	100.000	Pan_troglodytes
ENSNLEG00000013288	SBDS	91	97.727	ENSPTRG00000048174	-	96	97.235	Pan_troglodytes
ENSNLEG00000013288	SBDS	100	99.600	ENSPANG00000004078	SBDS	100	99.600	Papio_anubis
ENSNLEG00000013288	SBDS	100	84.400	ENSPKIG00000006489	sbds	100	84.400	Paramormyrops_kingsleyae
ENSNLEG00000013288	SBDS	83	90.338	ENSPSIG00000014603	SBDS	99	90.338	Pelodiscus_sinensis
ENSNLEG00000013288	SBDS	99	81.928	ENSPMGG00000004246	sbds	100	81.928	Periophthalmus_magnuspinnatus
ENSNLEG00000013288	SBDS	100	97.200	ENSPEMG00000008728	Sbds	100	97.200	Peromyscus_maniculatus_bairdii
ENSNLEG00000013288	SBDS	100	95.200	ENSPCIG00000029718	SBDS	100	95.200	Phascolarctos_cinereus
ENSNLEG00000013288	SBDS	99	80.723	ENSPFOG00000015837	sbds	100	80.723	Poecilia_formosa
ENSNLEG00000013288	SBDS	99	80.723	ENSPLAG00000003641	sbds	100	80.723	Poecilia_latipinna
ENSNLEG00000013288	SBDS	99	80.723	ENSPMEG00000019483	sbds	100	80.723	Poecilia_mexicana
ENSNLEG00000013288	SBDS	99	80.321	ENSPREG00000018758	sbds	100	80.321	Poecilia_reticulata
ENSNLEG00000013288	SBDS	100	100.000	ENSPPYG00000017513	SBDS	100	100.000	Pongo_abelii
ENSNLEG00000013288	SBDS	100	98.800	ENSPCOG00000021098	SBDS	100	98.800	Propithecus_coquereli
ENSNLEG00000013288	SBDS	100	99.200	ENSPVAG00000009369	SBDS	100	99.200	Pteropus_vampyrus
ENSNLEG00000013288	SBDS	99	83.534	ENSPNYG00000022403	sbds	100	83.534	Pundamilia_nyererei
ENSNLEG00000013288	SBDS	100	85.200	ENSPNAG00000001120	sbds	100	85.200	Pygocentrus_nattereri
ENSNLEG00000013288	SBDS	100	97.200	ENSRNOG00000000888	Sbds	100	97.200	Rattus_norvegicus
ENSNLEG00000013288	SBDS	100	100.000	ENSRBIG00000035557	SBDS	100	100.000	Rhinopithecus_bieti
ENSNLEG00000013288	SBDS	84	82.716	ENSRBIG00000041549	-	63	82.716	Rhinopithecus_bieti
ENSNLEG00000013288	SBDS	100	100.000	ENSRROG00000040842	-	100	100.000	Rhinopithecus_roxellana
ENSNLEG00000013288	SBDS	91	90.909	ENSRROG00000041986	-	100	80.000	Rhinopithecus_roxellana
ENSNLEG00000013288	SBDS	91	57.955	YLR022C	-	96	43.320	Saccharomyces_cerevisiae
ENSNLEG00000013288	SBDS	93	99.138	ENSSBOG00000022460	SBDS	100	99.138	Saimiri_boliviensis_boliviensis
ENSNLEG00000013288	SBDS	100	83.200	ENSSHAG00000010263	SBDS	100	83.200	Sarcophilus_harrisii
ENSNLEG00000013288	SBDS	100	85.600	ENSSFOG00015001108	sbds	100	85.600	Scleropages_formosus
ENSNLEG00000013288	SBDS	99	83.936	ENSSMAG00000020506	sbds	100	83.936	Scophthalmus_maximus
ENSNLEG00000013288	SBDS	99	82.731	ENSSDUG00000001528	sbds	100	82.731	Seriola_dumerili
ENSNLEG00000013288	SBDS	99	83.133	ENSSLDG00000003659	sbds	100	83.133	Seriola_lalandi_dorsalis
ENSNLEG00000013288	SBDS	91	95.455	ENSSARG00000013132	-	100	98.693	Sorex_araneus
ENSNLEG00000013288	SBDS	89	98.837	ENSSARG00000001899	-	73	98.837	Sorex_araneus
ENSNLEG00000013288	SBDS	100	86.800	ENSSPUG00000002699	SBDS	100	86.800	Sphenodon_punctatus
ENSNLEG00000013288	SBDS	99	83.133	ENSSPAG00000016419	sbds	100	75.600	Stegastes_partitus
ENSNLEG00000013288	SBDS	100	99.200	ENSSSCG00000007732	SBDS	100	99.200	Sus_scrofa
ENSNLEG00000013288	SBDS	66	89.091	ENSTGUG00000003426	SBDS	99	89.091	Taeniopygia_guttata
ENSNLEG00000013288	SBDS	99	83.133	ENSTRUG00000021443	sbds	100	83.133	Takifugu_rubripes
ENSNLEG00000013288	SBDS	99	81.928	ENSTNIG00000019000	sbds	100	81.928	Tetraodon_nigroviridis
ENSNLEG00000013288	SBDS	91	95.455	ENSTBEG00000001178	SBDS	100	84.135	Tupaia_belangeri
ENSNLEG00000013288	SBDS	91	97.727	ENSTTRG00000003921	SBDS	100	79.200	Tursiops_truncatus
ENSNLEG00000013288	SBDS	100	98.800	ENSUAMG00000001326	SBDS	100	98.800	Ursus_americanus
ENSNLEG00000013288	SBDS	100	98.800	ENSUMAG00000015353	SBDS	100	98.800	Ursus_maritimus
ENSNLEG00000013288	SBDS	100	99.200	ENSVVUG00000016478	SBDS	100	99.200	Vulpes_vulpes
ENSNLEG00000013288	SBDS	100	86.400	ENSXETG00000010093	sbds	100	86.400	Xenopus_tropicalis
ENSNLEG00000013288	SBDS	91	86.364	ENSXCOG00000010639	sbds	100	73.494	Xiphophorus_couchianus
ENSNLEG00000013288	SBDS	99	81.124	ENSXMAG00000006065	sbds	100	81.124	Xiphophorus_maculatus