EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000013872 (Gene tree)
Gene ID: 100587202
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 11585 bases
Position: chr3:36933293-36944877
Accession: 100587202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000016861	EXOSC1	PF10447.9	2.1e-13	1	1
ENSNLEP00000031174	EXOSC1	PF10447.9	8.3e-12	1	1
ENSNLEP00000036785	ECR1_N	PF14382.6	5.7e-09	1	1
ENSNLEP00000041843	ECR1_N	PF14382.6	6.4e-09	1	1
ENSNLEP00000031174	ECR1_N	PF14382.6	7.5e-09	1	1
ENSNLEP00000016861	ECR1_N	PF14382.6	9.1e-09	1	1
ENSNLEP00000030444	ECR1_N	PF14382.6	9.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000017714	EXOSC1-201	925	XM_012505682	ENSNLEP00000016861	195 (aa)	XP_012361136	G1RUD6
ENSNLET00000038900	EXOSC1-203	537	-	ENSNLEP00000030444	178 (aa)	-	A0A2I3GGM0
ENSNLET00000060119	EXOSC1-202	818	XM_012505683	ENSNLEP00000031174	170 (aa)	XP_012361137	A0A2I3GIQ6
ENSNLET00000044320	EXOSC1-205	420	-	ENSNLEP00000036785	139 (aa)	-	A0A2I3GZW4
ENSNLET00000055921	EXOSC1-204	465	-	ENSNLEP00000041843	154 (aa)	-	A0A2I3HDW1

Gene Model

Click here to download ENSNLEG00000013872's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000013872's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000013872	EXOSC1	100	100.000	ENSG00000171311	EXOSC1	100	99.487	Homo_sapiens
ENSNLEG00000013872	EXOSC1	98	79.581	ENSAPOG00000007822	exosc1	98	79.581	Acanthochromis_polyacanthus
ENSNLEG00000013872	EXOSC1	100	96.923	ENSAMEG00000000129	EXOSC1	100	96.923	Ailuropoda_melanoleuca
ENSNLEG00000013872	EXOSC1	96	79.255	ENSACIG00000018956	exosc1	92	79.255	Amphilophus_citrinellus
ENSNLEG00000013872	EXOSC1	98	79.581	ENSAOCG00000010699	exosc1	98	79.581	Amphiprion_ocellaris
ENSNLEG00000013872	EXOSC1	91	77.778	ENSAPEG00000012690	exosc1	96	77.778	Amphiprion_percula
ENSNLEG00000013872	EXOSC1	98	79.058	ENSATEG00000018683	exosc1	98	79.058	Anabas_testudineus
ENSNLEG00000013872	EXOSC1	99	83.938	ENSACAG00000002101	EXOSC1	99	83.938	Anolis_carolinensis
ENSNLEG00000013872	EXOSC1	100	98.701	ENSANAG00000034669	EXOSC1	100	98.701	Aotus_nancymaae
ENSNLEG00000013872	EXOSC1	98	79.581	ENSACLG00000021243	exosc1	98	79.581	Astatotilapia_calliptera
ENSNLEG00000013872	EXOSC1	98	81.152	ENSAMXG00000011116	exosc1	98	81.152	Astyanax_mexicanus
ENSNLEG00000013872	EXOSC1	100	96.410	ENSBTAG00000012699	EXOSC1	100	96.410	Bos_taurus
ENSNLEG00000013872	EXOSC1	92	32.979	WBGene00012966	exos-1	90	32.979	Caenorhabditis_elegans
ENSNLEG00000013872	EXOSC1	100	98.701	ENSCJAG00000016586	EXOSC1	100	98.701	Callithrix_jacchus
ENSNLEG00000013872	EXOSC1	100	96.410	ENSCAFG00000009068	EXOSC1	94	96.410	Canis_familiaris
ENSNLEG00000013872	EXOSC1	100	96.410	ENSCAFG00020006002	EXOSC1	94	96.410	Canis_lupus_dingo
ENSNLEG00000013872	EXOSC1	100	96.410	ENSCHIG00000015253	EXOSC1	100	96.410	Capra_hircus
ENSNLEG00000013872	EXOSC1	100	96.471	ENSTSYG00000000760	EXOSC1	100	96.471	Carlito_syrichta
ENSNLEG00000013872	EXOSC1	100	96.753	ENSCPOG00000001173	EXOSC1	100	96.753	Cavia_porcellus
ENSNLEG00000013872	EXOSC1	100	61.765	ENSCCAG00000023986	EXOSC1	100	61.765	Cebus_capucinus
ENSNLEG00000013872	EXOSC1	100	100.000	ENSCATG00000034114	EXOSC1	100	100.000	Cercocebus_atys
ENSNLEG00000013872	EXOSC1	100	97.403	ENSCLAG00000002463	EXOSC1	100	97.403	Chinchilla_lanigera
ENSNLEG00000013872	EXOSC1	100	98.974	ENSCSAG00000005870	EXOSC1	100	98.974	Chlorocebus_sabaeus
ENSNLEG00000013872	EXOSC1	96	82.353	ENSCHOG00000006477	EXOSC1	100	82.353	Choloepus_hoffmanni
ENSNLEG00000013872	EXOSC1	81	78.761	ENSCPBG00000011949	EXOSC1	93	78.761	Chrysemys_picta_bellii
ENSNLEG00000013872	EXOSC1	95	55.615	ENSCING00000022734	-	89	55.615	Ciona_intestinalis
ENSNLEG00000013872	EXOSC1	95	57.219	ENSCSAVG00000010865	-	95	57.219	Ciona_savignyi
ENSNLEG00000013872	EXOSC1	100	100.000	ENSCANG00000034159	EXOSC1	100	100.000	Colobus_angolensis_palliatus
ENSNLEG00000013872	EXOSC1	100	96.753	ENSCGRG00001000335	Exosc1	100	96.753	Cricetulus_griseus_chok1gshd
ENSNLEG00000013872	EXOSC1	100	96.753	ENSCGRG00000011602	Exosc1	100	96.753	Cricetulus_griseus_crigri
ENSNLEG00000013872	EXOSC1	98	76.506	ENSCSEG00000007895	exosc1	95	76.506	Cynoglossus_semilaevis
ENSNLEG00000013872	EXOSC1	98	75.916	ENSCVAG00000016748	exosc1	98	75.916	Cyprinodon_variegatus
ENSNLEG00000013872	EXOSC1	98	80.105	ENSDARG00000059841	exosc1	98	80.105	Danio_rerio
ENSNLEG00000013872	EXOSC1	86	93.333	ENSDNOG00000007983	EXOSC1	100	96.622	Dasypus_novemcinctus
ENSNLEG00000013872	EXOSC1	100	96.104	ENSDORG00000016528	Exosc1	100	96.104	Dipodomys_ordii
ENSNLEG00000013872	EXOSC1	94	47.619	FBgn0032346	Csl4	92	47.619	Drosophila_melanogaster
ENSNLEG00000013872	EXOSC1	100	94.359	ENSETEG00000002469	-	100	94.359	Echinops_telfairi
ENSNLEG00000013872	EXOSC1	99	61.735	ENSEBUG00000008164	exosc1	98	61.735	Eptatretus_burgeri
ENSNLEG00000013872	EXOSC1	100	87.766	ENSEASG00005008684	EXOSC1	100	87.766	Equus_asinus_asinus
ENSNLEG00000013872	EXOSC1	100	82.014	ENSECAG00000010621	EXOSC1	84	82.014	Equus_caballus
ENSNLEG00000013872	EXOSC1	100	96.410	ENSEEUG00000005647	EXOSC1	100	96.410	Erinaceus_europaeus
ENSNLEG00000013872	EXOSC1	94	80.435	ENSELUG00000017369	exosc1	97	71.856	Esox_lucius
ENSNLEG00000013872	EXOSC1	100	97.647	ENSFCAG00000040563	EXOSC1	100	97.647	Felis_catus
ENSNLEG00000013872	EXOSC1	100	82.564	ENSFALG00000008450	EXOSC1	100	82.564	Ficedula_albicollis
ENSNLEG00000013872	EXOSC1	100	96.923	ENSFDAG00000000846	EXOSC1	100	96.923	Fukomys_damarensis
ENSNLEG00000013872	EXOSC1	98	75.916	ENSFHEG00000009154	exosc1	98	75.916	Fundulus_heteroclitus
ENSNLEG00000013872	EXOSC1	98	79.581	ENSGMOG00000008993	exosc1	98	79.581	Gadus_morhua
ENSNLEG00000013872	EXOSC1	100	81.765	ENSGALG00000039917	EXOSC1	100	85.616	Gallus_gallus
ENSNLEG00000013872	EXOSC1	98	76.440	ENSGAFG00000010265	exosc1	94	76.440	Gambusia_affinis
ENSNLEG00000013872	EXOSC1	98	79.581	ENSGACG00000018936	exosc1	98	79.581	Gasterosteus_aculeatus
ENSNLEG00000013872	EXOSC1	100	84.615	ENSGAGG00000019192	EXOSC1	100	84.615	Gopherus_agassizii
ENSNLEG00000013872	EXOSC1	100	98.235	ENSGGOG00000003099	EXOSC1	100	98.235	Gorilla_gorilla
ENSNLEG00000013872	EXOSC1	98	79.581	ENSHBUG00000017857	exosc1	98	79.581	Haplochromis_burtoni
ENSNLEG00000013872	EXOSC1	100	97.403	ENSHGLG00000016927	EXOSC1	100	97.403	Heterocephalus_glaber_female
ENSNLEG00000013872	EXOSC1	100	97.403	ENSHGLG00100012208	EXOSC1	100	97.403	Heterocephalus_glaber_male
ENSNLEG00000013872	EXOSC1	98	78.534	ENSHCOG00000019882	exosc1	98	78.534	Hippocampus_comes
ENSNLEG00000013872	EXOSC1	98	79.581	ENSIPUG00000007685	exosc1	98	79.581	Ictalurus_punctatus
ENSNLEG00000013872	EXOSC1	100	97.403	ENSSTOG00000006615	EXOSC1	100	97.403	Ictidomys_tridecemlineatus
ENSNLEG00000013872	EXOSC1	86	83.471	ENSSTOG00000029860	-	93	83.471	Ictidomys_tridecemlineatus
ENSNLEG00000013872	EXOSC1	100	95.897	ENSJJAG00000013311	Exosc1	100	95.897	Jaculus_jaculus
ENSNLEG00000013872	EXOSC1	98	77.604	ENSKMAG00000001202	exosc1	81	77.604	Kryptolebias_marmoratus
ENSNLEG00000013872	EXOSC1	98	79.058	ENSLBEG00000011448	exosc1	98	79.058	Labrus_bergylta
ENSNLEG00000013872	EXOSC1	97	75.641	ENSLOCG00000003776	exosc1	98	75.641	Lepisosteus_oculatus
ENSNLEG00000013872	EXOSC1	100	96.410	ENSLAFG00000015983	EXOSC1	100	96.410	Loxodonta_africana
ENSNLEG00000013872	EXOSC1	100	100.000	ENSMFAG00000001493	EXOSC1	100	100.000	Macaca_fascicularis
ENSNLEG00000013872	EXOSC1	100	100.000	ENSMMUG00000020028	EXOSC1	100	100.000	Macaca_mulatta
ENSNLEG00000013872	EXOSC1	100	99.487	ENSMNEG00000029816	EXOSC1	100	99.487	Macaca_nemestrina
ENSNLEG00000013872	EXOSC1	100	100.000	ENSMLEG00000027643	EXOSC1	100	100.000	Mandrillus_leucophaeus
ENSNLEG00000013872	EXOSC1	98	80.105	ENSMAMG00000012200	exosc1	98	80.105	Mastacembelus_armatus
ENSNLEG00000013872	EXOSC1	98	79.581	ENSMZEG00005007042	exosc1	98	79.581	Maylandia_zebra
ENSNLEG00000013872	EXOSC1	100	95.882	ENSMAUG00000020462	-	100	95.882	Mesocricetus_auratus
ENSNLEG00000013872	EXOSC1	100	96.753	ENSMICG00000007664	EXOSC1	100	96.753	Microcebus_murinus
ENSNLEG00000013872	EXOSC1	97	88.947	ENSMOCG00000017124	-	97	88.947	Microtus_ochrogaster
ENSNLEG00000013872	EXOSC1	100	96.753	ENSMOCG00000006004	-	100	96.753	Microtus_ochrogaster
ENSNLEG00000013872	EXOSC1	99	77.124	ENSMMOG00000021403	exosc1	99	77.124	Mola_mola
ENSNLEG00000013872	EXOSC1	100	91.327	ENSMODG00000004213	EXOSC1	100	91.327	Monodelphis_domestica
ENSNLEG00000013872	EXOSC1	94	80.435	ENSMALG00000007061	exosc1	92	80.435	Monopterus_albus
ENSNLEG00000013872	EXOSC1	100	96.104	MGP_CAROLIEiJ_G0022959	Exosc1	100	96.104	Mus_caroli
ENSNLEG00000013872	EXOSC1	100	96.753	ENSMUSG00000034321	Exosc1	100	96.753	Mus_musculus
ENSNLEG00000013872	EXOSC1	100	96.753	MGP_PahariEiJ_G0014449	Exosc1	100	96.753	Mus_pahari
ENSNLEG00000013872	EXOSC1	100	96.104	MGP_SPRETEiJ_G0023880	Exosc1	100	96.104	Mus_spretus
ENSNLEG00000013872	EXOSC1	100	96.923	ENSMPUG00000017044	EXOSC1	100	96.923	Mustela_putorius_furo
ENSNLEG00000013872	EXOSC1	100	96.410	ENSMLUG00000009228	EXOSC1	100	96.410	Myotis_lucifugus
ENSNLEG00000013872	EXOSC1	100	94.359	ENSNGAG00000022033	Exosc1	100	94.359	Nannospalax_galili
ENSNLEG00000013872	EXOSC1	97	78.000	ENSNBRG00000024007	exosc1	97	78.000	Neolamprologus_brichardi
ENSNLEG00000013872	EXOSC1	83	89.565	ENSMEUG00000002246	EXOSC1	100	89.565	Notamacropus_eugenii
ENSNLEG00000013872	EXOSC1	100	94.872	ENSOPRG00000005065	EXOSC1	100	94.872	Ochotona_princeps
ENSNLEG00000013872	EXOSC1	100	96.753	ENSODEG00000016709	EXOSC1	100	96.753	Octodon_degus
ENSNLEG00000013872	EXOSC1	98	79.581	ENSONIG00000017683	exosc1	98	79.581	Oreochromis_niloticus
ENSNLEG00000013872	EXOSC1	68	92.174	ENSOANG00000006563	EXOSC1	100	89.683	Ornithorhynchus_anatinus
ENSNLEG00000013872	EXOSC1	100	90.256	ENSOCUG00000026461	-	100	90.256	Oryctolagus_cuniculus
ENSNLEG00000013872	EXOSC1	100	95.408	ENSOCUG00000011898	-	100	95.408	Oryctolagus_cuniculus
ENSNLEG00000013872	EXOSC1	98	78.125	ENSORLG00000011595	exosc1	98	78.125	Oryzias_latipes
ENSNLEG00000013872	EXOSC1	98	78.125	ENSORLG00020005831	exosc1	98	78.125	Oryzias_latipes_hni
ENSNLEG00000013872	EXOSC1	98	78.125	ENSORLG00015004317	exosc1	98	78.125	Oryzias_latipes_hsok
ENSNLEG00000013872	EXOSC1	97	65.318	ENSOMEG00000013907	exosc1	98	65.318	Oryzias_melastigma
ENSNLEG00000013872	EXOSC1	100	95.897	ENSOGAG00000016259	EXOSC1	100	95.897	Otolemur_garnettii
ENSNLEG00000013872	EXOSC1	100	95.897	ENSOARG00000010136	EXOSC1	100	95.897	Ovis_aries
ENSNLEG00000013872	EXOSC1	100	100.000	ENSPPAG00000039842	EXOSC1	100	100.000	Pan_paniscus
ENSNLEG00000013872	EXOSC1	100	97.647	ENSPPRG00000023366	EXOSC1	100	97.647	Panthera_pardus
ENSNLEG00000013872	EXOSC1	100	97.647	ENSPTIG00000017701	EXOSC1	100	97.647	Panthera_tigris_altaica
ENSNLEG00000013872	EXOSC1	100	100.000	ENSPTRG00000002808	EXOSC1	100	100.000	Pan_troglodytes
ENSNLEG00000013872	EXOSC1	100	100.000	ENSPANG00000021324	EXOSC1	100	100.000	Papio_anubis
ENSNLEG00000013872	EXOSC1	98	80.105	ENSPKIG00000016037	exosc1	98	80.105	Paramormyrops_kingsleyae
ENSNLEG00000013872	EXOSC1	75	82.192	ENSPSIG00000013571	EXOSC1	98	80.992	Pelodiscus_sinensis
ENSNLEG00000013872	EXOSC1	98	76.506	ENSPMGG00000014002	exosc1	98	76.506	Periophthalmus_magnuspinnatus
ENSNLEG00000013872	EXOSC1	100	96.753	ENSPEMG00000010710	-	100	96.753	Peromyscus_maniculatus_bairdii
ENSNLEG00000013872	EXOSC1	95	70.588	ENSPMAG00000000195	exosc1	95	70.588	Petromyzon_marinus
ENSNLEG00000013872	EXOSC1	100	92.308	ENSPCIG00000002210	EXOSC1	99	92.308	Phascolarctos_cinereus
ENSNLEG00000013872	EXOSC1	98	75.916	ENSPFOG00000006755	exosc1	94	75.916	Poecilia_formosa
ENSNLEG00000013872	EXOSC1	98	75.916	ENSPLAG00000005880	exosc1	98	75.916	Poecilia_latipinna
ENSNLEG00000013872	EXOSC1	98	75.916	ENSPMEG00000015598	exosc1	94	75.916	Poecilia_mexicana
ENSNLEG00000013872	EXOSC1	98	74.096	ENSPREG00000000405	exosc1	93	74.096	Poecilia_reticulata
ENSNLEG00000013872	EXOSC1	100	98.974	ENSPPYG00000002531	EXOSC1	100	98.974	Pongo_abelii
ENSNLEG00000013872	EXOSC1	100	95.897	ENSPCAG00000009135	EXOSC1	100	95.897	Procavia_capensis
ENSNLEG00000013872	EXOSC1	100	90.769	ENSPCOG00000027539	EXOSC1	100	90.769	Propithecus_coquereli
ENSNLEG00000013872	EXOSC1	100	96.923	ENSPVAG00000003372	EXOSC1	100	96.923	Pteropus_vampyrus
ENSNLEG00000013872	EXOSC1	98	79.581	ENSPNYG00000021745	exosc1	98	79.581	Pundamilia_nyererei
ENSNLEG00000013872	EXOSC1	98	80.105	ENSPNAG00000001944	exosc1	98	80.105	Pygocentrus_nattereri
ENSNLEG00000013872	EXOSC1	100	96.753	ENSRNOG00000048708	Exosc1	100	96.753	Rattus_norvegicus
ENSNLEG00000013872	EXOSC1	100	100.000	ENSRBIG00000035618	EXOSC1	100	100.000	Rhinopithecus_bieti
ENSNLEG00000013872	EXOSC1	100	100.000	ENSRROG00000032589	EXOSC1	100	100.000	Rhinopithecus_roxellana
ENSNLEG00000013872	EXOSC1	56	46.939	YNL232W	CSL4	54	35.625	Saccharomyces_cerevisiae
ENSNLEG00000013872	EXOSC1	100	98.235	ENSSBOG00000000359	EXOSC1	100	98.235	Saimiri_boliviensis_boliviensis
ENSNLEG00000013872	EXOSC1	75	94.558	ENSSHAG00000018219	EXOSC1	100	94.558	Sarcophilus_harrisii
ENSNLEG00000013872	EXOSC1	98	81.152	ENSSFOG00015009069	exosc1	98	81.152	Scleropages_formosus
ENSNLEG00000013872	EXOSC1	98	77.246	ENSSFOG00015016289	-	98	77.895	Scleropages_formosus
ENSNLEG00000013872	EXOSC1	98	80.105	ENSSMAG00000003721	exosc1	98	80.105	Scophthalmus_maximus
ENSNLEG00000013872	EXOSC1	98	80.105	ENSSDUG00000002993	exosc1	98	80.105	Seriola_dumerili
ENSNLEG00000013872	EXOSC1	98	80.105	ENSSLDG00000025181	exosc1	98	80.105	Seriola_lalandi_dorsalis
ENSNLEG00000013872	EXOSC1	100	83.077	ENSSARG00000000162	EXOSC1	100	83.077	Sorex_araneus
ENSNLEG00000013872	EXOSC1	99	84.021	ENSSPUG00000012263	EXOSC1	99	84.021	Sphenodon_punctatus
ENSNLEG00000013872	EXOSC1	98	78.161	ENSSPAG00000016792	exosc1	82	78.161	Stegastes_partitus
ENSNLEG00000013872	EXOSC1	100	95.897	ENSSSCG00000010518	EXOSC1	91	95.897	Sus_scrofa
ENSNLEG00000013872	EXOSC1	98	80.729	ENSTGUG00000009692	EXOSC1	99	80.729	Taeniopygia_guttata
ENSNLEG00000013872	EXOSC1	97	73.545	ENSTRUG00000007706	exosc1	98	73.545	Takifugu_rubripes
ENSNLEG00000013872	EXOSC1	97	73.438	ENSTNIG00000014079	exosc1	97	73.438	Tetraodon_nigroviridis
ENSNLEG00000013872	EXOSC1	100	88.205	ENSTBEG00000006011	EXOSC1	100	88.205	Tupaia_belangeri
ENSNLEG00000013872	EXOSC1	94	96.739	ENSTTRG00000009887	EXOSC1	100	96.739	Tursiops_truncatus
ENSNLEG00000013872	EXOSC1	100	83.240	ENSUAMG00000010266	EXOSC1	100	83.240	Ursus_americanus
ENSNLEG00000013872	EXOSC1	100	83.240	ENSUMAG00000022002	EXOSC1	100	83.240	Ursus_maritimus
ENSNLEG00000013872	EXOSC1	100	96.410	ENSVVUG00000023192	EXOSC1	63	96.410	Vulpes_vulpes
ENSNLEG00000013872	EXOSC1	98	78.125	ENSXETG00000003434	exosc1	99	78.125	Xenopus_tropicalis
ENSNLEG00000013872	EXOSC1	71	83.333	ENSXCOG00000014499	exosc1	92	83.333	Xiphophorus_couchianus
ENSNLEG00000013872	EXOSC1	98	74.699	ENSXMAG00000023382	exosc1	93	74.699	Xiphophorus_maculatus