EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000014173 (Gene tree)
Gene ID: 100598668
Gene Symbol: RDM1
Alias: MGC33977|RAD52B
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 12563 bases
Position: chrGL397538.1:634587-647149
Accession: 100598668
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000025814	RRM_1	PF00076.22	7.6e-06	1	1
ENSNLEP00000032756	RRM_1	PF00076.22	1.5e-05	1	1
ENSNLEP00000029317	RRM_1	PF00076.22	2.6e-05	1	1
ENSNLEP00000017246	RRM_1	PF00076.22	3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000044535	RDM1-203	800	XM_003281377	ENSNLEP00000032756	166 (aa)	XP_003281425	A0A2I3GN66
ENSNLET00000018111	RDM1-202	1154	XM_003281375	ENSNLEP00000017246	284 (aa)	XP_003281423	G1RVG9
ENSNLET00000037924	RDM1-201	1066	XM_004092723	ENSNLEP00000029317	251 (aa)	XP_004092771	A0A2I3GDD6
ENSNLET00000036997	RDM1-204	1015	XM_012503833	ENSNLEP00000025814	116 (aa)	XP_012359287	A0A2I3FZU4

Gene Model

Click here to download ENSNLEG00000014173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000014173's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000014173	RDM1	100	96.831	ENSG00000278023	RDM1	100	96.831	Homo_sapiens
ENSNLEG00000014173	RDM1	90	48.113	ENSAPOG00000021886	zgc:103564	84	34.783	Acanthochromis_polyacanthus
ENSNLEG00000014173	RDM1	54	87.302	ENSAMEG00000019542	-	93	87.302	Ailuropoda_melanoleuca
ENSNLEG00000014173	RDM1	90	48.113	ENSAPEG00000008929	zgc:103564	92	33.730	Amphiprion_percula
ENSNLEG00000014173	RDM1	94	64.865	ENSAPLG00000004384	RDM1	94	53.036	Anas_platyrhynchos
ENSNLEG00000014173	RDM1	87	61.386	ENSACAG00000012989	-	100	49.466	Anolis_carolinensis
ENSNLEG00000014173	RDM1	100	95.181	ENSANAG00000032752	RDM1	100	95.181	Aotus_nancymaae
ENSNLEG00000014173	RDM1	100	88.889	ENSBTAG00000000030	RDM1	100	80.000	Bos_taurus
ENSNLEG00000014173	RDM1	92	94.393	ENSCJAG00000015031	RDM1	99	93.274	Callithrix_jacchus
ENSNLEG00000014173	RDM1	89	86.408	ENSCAFG00000015160	-	100	76.172	Canis_familiaris
ENSNLEG00000014173	RDM1	98	88.148	ENSCHIG00000020607	RDM1	100	80.142	Capra_hircus
ENSNLEG00000014173	RDM1	100	70.070	ENSCPOG00000001495	-	99	70.070	Cavia_porcellus
ENSNLEG00000014173	RDM1	96	91.176	ENSCCAG00000035763	RDM1	100	94.030	Cebus_capucinus
ENSNLEG00000014173	RDM1	100	96.386	ENSCATG00000044451	RDM1	100	96.386	Cercocebus_atys
ENSNLEG00000014173	RDM1	95	92.857	ENSCSAG00000006209	RDM1	100	90.977	Chlorocebus_sabaeus
ENSNLEG00000014173	RDM1	89	69.903	ENSCPBG00000009105	RDM1	93	54.694	Chrysemys_picta_bellii
ENSNLEG00000014173	RDM1	100	95.783	ENSCANG00000041322	RDM1	100	95.783	Colobus_angolensis_palliatus
ENSNLEG00000014173	RDM1	87	84.158	ENSCGRG00001015927	Rdm1	99	74.205	Cricetulus_griseus_chok1gshd
ENSNLEG00000014173	RDM1	86	42.157	ENSCVAG00000001956	zgc:103564	96	35.075	Cyprinodon_variegatus
ENSNLEG00000014173	RDM1	89	86.408	ENSDNOG00000045224	-	94	81.818	Dasypus_novemcinctus
ENSNLEG00000014173	RDM1	90	90.385	ENSEASG00005010554	RDM1	69	81.959	Equus_asinus_asinus
ENSNLEG00000014173	RDM1	94	86.239	ENSECAG00000022182	RDM1	91	82.745	Equus_caballus
ENSNLEG00000014173	RDM1	87	84.158	ENSEEUG00000006127	RDM1	100	75.000	Erinaceus_europaeus
ENSNLEG00000014173	RDM1	95	86.364	ENSFCAG00000043429	RDM1	96	90.226	Felis_catus
ENSNLEG00000014173	RDM1	87	68.317	ENSGALG00000000243	RDM1	97	54.513	Gallus_gallus
ENSNLEG00000014173	RDM1	87	71.287	ENSGAGG00000000293	-	78	53.815	Gopherus_agassizii
ENSNLEG00000014173	RDM1	100	97.535	ENSGGOG00000010584	RDM1	100	97.535	Gorilla_gorilla
ENSNLEG00000014173	RDM1	87	45.098	ENSHCOG00000002518	-	90	36.111	Hippocampus_comes
ENSNLEG00000014173	RDM1	100	88.148	ENSSTOG00000022491	RDM1	100	84.155	Ictidomys_tridecemlineatus
ENSNLEG00000014173	RDM1	100	78.671	ENSLAFG00000029300	RDM1	100	78.671	Loxodonta_africana
ENSNLEG00000014173	RDM1	100	96.386	ENSMFAG00000032968	RDM1	100	96.386	Macaca_fascicularis
ENSNLEG00000014173	RDM1	100	96.386	ENSMMUG00000006847	RDM1	100	96.386	Macaca_mulatta
ENSNLEG00000014173	RDM1	100	96.386	ENSMNEG00000039977	RDM1	100	96.386	Macaca_nemestrina
ENSNLEG00000014173	RDM1	100	96.386	ENSMLEG00000041158	RDM1	100	96.386	Mandrillus_leucophaeus
ENSNLEG00000014173	RDM1	87	67.327	ENSMGAG00000008774	RDM1	96	55.510	Meleagris_gallopavo
ENSNLEG00000014173	RDM1	99	80.000	ENSMAUG00000018559	Rdm1	99	74.296	Mesocricetus_auratus
ENSNLEG00000014173	RDM1	100	93.333	ENSMICG00000038651	RDM1	100	92.029	Microcebus_murinus
ENSNLEG00000014173	RDM1	94	74.336	ENSMOCG00000015095	Rdm1	99	69.928	Microtus_ochrogaster
ENSNLEG00000014173	RDM1	87	78.218	ENSMODG00000011101	RDM1	100	64.855	Monodelphis_domestica
ENSNLEG00000014173	RDM1	91	84.259	MGP_CAROLIEiJ_G0017226	Rdm1	99	73.852	Mus_caroli
ENSNLEG00000014173	RDM1	91	83.333	ENSMUSG00000010362	Rdm1	99	73.929	Mus_musculus
ENSNLEG00000014173	RDM1	99	83.704	MGP_PahariEiJ_G0018356	Rdm1	99	73.944	Mus_pahari
ENSNLEG00000014173	RDM1	91	82.407	MGP_SPRETEiJ_G0018069	Rdm1	99	73.498	Mus_spretus
ENSNLEG00000014173	RDM1	100	91.111	ENSMPUG00000008363	RDM1	100	82.867	Mustela_putorius_furo
ENSNLEG00000014173	RDM1	86	75.000	ENSMEUG00000015826	RDM1	95	68.644	Notamacropus_eugenii
ENSNLEG00000014173	RDM1	88	86.275	ENSOCUG00000022704	RDM1	97	79.447	Oryctolagus_cuniculus
ENSNLEG00000014173	RDM1	100	87.407	ENSOGAG00000011332	RDM1	100	84.507	Otolemur_garnettii
ENSNLEG00000014173	RDM1	100	97.887	ENSPPAG00000029969	RDM1	100	97.887	Pan_paniscus
ENSNLEG00000014173	RDM1	100	98.239	ENSPTRG00000009031	RDM1	100	98.239	Pan_troglodytes
ENSNLEG00000014173	RDM1	100	96.988	ENSPANG00000022933	RDM1	100	96.988	Papio_anubis
ENSNLEG00000014173	RDM1	91	78.704	ENSPEMG00000018985	Rdm1	99	73.239	Peromyscus_maniculatus_bairdii
ENSNLEG00000014173	RDM1	100	96.831	ENSPPYG00000008198	RDM1	100	96.831	Pongo_abelii
ENSNLEG00000014173	RDM1	100	87.407	ENSPCOG00000017995	RDM1	100	86.232	Propithecus_coquereli
ENSNLEG00000014173	RDM1	87	91.089	ENSPVAG00000001116	RDM1	100	84.462	Pteropus_vampyrus
ENSNLEG00000014173	RDM1	91	82.407	ENSRNOG00000020751	Rdm1	99	73.571	Rattus_norvegicus
ENSNLEG00000014173	RDM1	100	96.386	ENSRBIG00000030000	RDM1	100	96.386	Rhinopithecus_bieti
ENSNLEG00000014173	RDM1	100	96.386	ENSRROG00000035242	RDM1	100	96.386	Rhinopithecus_roxellana
ENSNLEG00000014173	RDM1	97	67.754	ENSSHAG00000013584	RDM1	100	67.754	Sarcophilus_harrisii
ENSNLEG00000014173	RDM1	86	68.000	ENSSPUG00000010941	RDM1	94	52.672	Sphenodon_punctatus
ENSNLEG00000014173	RDM1	84	49.000	ENSSPAG00000011690	-	95	36.604	Stegastes_partitus
ENSNLEG00000014173	RDM1	80	81.720	ENSSSCG00000017574	-	93	73.214	Sus_scrofa
ENSNLEG00000014173	RDM1	87	86.139	ENSTBEG00000010030	RDM1	99	64.286	Tupaia_belangeri
ENSNLEG00000014173	RDM1	100	91.111	ENSUAMG00000027279	RDM1	100	84.507	Ursus_americanus
ENSNLEG00000014173	RDM1	100	91.111	ENSUMAG00000015423	RDM1	98	84.507	Ursus_maritimus