EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000014225 (Gene tree)
Gene ID: 100598516
Gene Symbol: SMARCAD1
Alias: DKFZP762K2015|ETL1|KIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 87670 bases
Position: chr9:79007278-79094947
Accession: 100598516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000023924	ResIII	PF04851.15	1.9e-10	1	1
ENSNLEP00000017356	ResIII	PF04851.15	2.8e-10	1	1
ENSNLEP00000042881	ResIII	PF04851.15	2.8e-10	1	1
ENSNLEP00000040290	ResIII	PF04851.15	3.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000032295	SMARCAD1-204	3941	XM_003257530	ENSNLEP00000023924	596 (aa)	XP_003257578	M3ZB37
ENSNLET00000042471	SMARCAD1-202	3081	XM_012499602	ENSNLEP00000042881	1026 (aa)	XP_012355056	G1RVS9
ENSNLET00000035443	SMARCAD1-203	3030	-	ENSNLEP00000040290	1009 (aa)	-	A0A2I3H9X3
ENSNLET00000018223	SMARCAD1-201	5023	-	ENSNLEP00000017356	1026 (aa)	-	G1RVS9

Gene Model

Click here to download ENSNLEG00000014225's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000014225's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000014225	SMARCAD1	87	37.660	ENSNLEG00000012987	HELLS	77	37.887
ENSNLEG00000014225	SMARCAD1	85	36.614	ENSNLEG00000000179	CHD1L	50	36.614
ENSNLEG00000014225	SMARCAD1	84	33.017	ENSNLEG00000003062	-	68	33.017

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000014225	SMARCAD1	100	100.000	ENSG00000163104	SMARCAD1	100	100.000	Homo_sapiens
ENSNLEG00000014225	SMARCAD1	99	67.340	ENSAPOG00000011446	smarcad1a	66	62.483	Acanthochromis_polyacanthus
ENSNLEG00000014225	SMARCAD1	100	98.993	ENSAMEG00000005844	SMARCAD1	100	97.471	Ailuropoda_melanoleuca
ENSNLEG00000014225	SMARCAD1	97	67.530	ENSACIG00000018326	smarcad1a	100	68.587	Amphilophus_citrinellus
ENSNLEG00000014225	SMARCAD1	99	67.340	ENSAOCG00000019762	smarcad1a	96	62.748	Amphiprion_ocellaris
ENSNLEG00000014225	SMARCAD1	99	67.508	ENSAPEG00000003889	smarcad1a	66	62.483	Amphiprion_percula
ENSNLEG00000014225	SMARCAD1	97	68.631	ENSATEG00000015608	smarcad1a	90	62.921	Anabas_testudineus
ENSNLEG00000014225	SMARCAD1	100	84.757	ENSAPLG00000004630	SMARCAD1	100	72.467	Anas_platyrhynchos
ENSNLEG00000014225	SMARCAD1	100	83.417	ENSACAG00000013554	SMARCAD1	100	70.320	Anolis_carolinensis
ENSNLEG00000014225	SMARCAD1	100	99.497	ENSANAG00000020488	SMARCAD1	100	99.125	Aotus_nancymaae
ENSNLEG00000014225	SMARCAD1	100	67.114	ENSACLG00000017063	smarcad1a	99	61.308	Astatotilapia_calliptera
ENSNLEG00000014225	SMARCAD1	100	67.953	ENSAMXG00000019130	smarcad1b	85	59.774	Astyanax_mexicanus
ENSNLEG00000014225	SMARCAD1	100	65.436	ENSAMXG00000015470	smarcad1a	99	60.251	Astyanax_mexicanus
ENSNLEG00000014225	SMARCAD1	100	97.993	ENSBTAG00000017061	SMARCAD1	100	96.696	Bos_taurus
ENSNLEG00000014225	SMARCAD1	96	44.597	WBGene00010845	M03C11.8	70	40.647	Caenorhabditis_elegans
ENSNLEG00000014225	SMARCAD1	100	99.832	ENSCJAG00000006778	SMARCAD1	100	99.415	Callithrix_jacchus
ENSNLEG00000014225	SMARCAD1	100	98.658	ENSCAFG00000010026	SMARCAD1	100	96.984	Canis_familiaris
ENSNLEG00000014225	SMARCAD1	100	98.658	ENSCAFG00020003994	SMARCAD1	99	97.973	Canis_lupus_dingo
ENSNLEG00000014225	SMARCAD1	100	98.826	ENSCHIG00000012905	SMARCAD1	100	97.179	Capra_hircus
ENSNLEG00000014225	SMARCAD1	100	98.826	ENSTSYG00000002706	SMARCAD1	100	97.858	Carlito_syrichta
ENSNLEG00000014225	SMARCAD1	97	87.348	ENSCAPG00000016744	SMARCAD1	96	79.239	Cavia_aperea
ENSNLEG00000014225	SMARCAD1	100	97.987	ENSCPOG00000011398	SMARCAD1	100	94.574	Cavia_porcellus
ENSNLEG00000014225	SMARCAD1	100	99.664	ENSCCAG00000022264	SMARCAD1	100	99.664	Cebus_capucinus
ENSNLEG00000014225	SMARCAD1	100	100.000	ENSCATG00000035663	SMARCAD1	100	99.775	Cercocebus_atys
ENSNLEG00000014225	SMARCAD1	100	100.000	ENSCSAG00000004186	SMARCAD1	100	99.881	Chlorocebus_sabaeus
ENSNLEG00000014225	SMARCAD1	100	85.427	ENSCPBG00000013203	SMARCAD1	100	74.256	Chrysemys_picta_bellii
ENSNLEG00000014225	SMARCAD1	100	50.415	ENSCING00000001688	-	99	49.700	Ciona_intestinalis
ENSNLEG00000014225	SMARCAD1	100	100.000	ENSCANG00000003556	SMARCAD1	100	100.000	Colobus_angolensis_palliatus
ENSNLEG00000014225	SMARCAD1	100	97.315	ENSCGRG00001015056	Smarcad1	100	93.372	Cricetulus_griseus_chok1gshd
ENSNLEG00000014225	SMARCAD1	100	97.315	ENSCGRG00000014087	Smarcad1	100	93.372	Cricetulus_griseus_crigri
ENSNLEG00000014225	SMARCAD1	100	65.772	ENSCSEG00000017903	smarcad1a	100	46.784	Cynoglossus_semilaevis
ENSNLEG00000014225	SMARCAD1	100	65.101	ENSCSEG00000014419	-	96	58.904	Cynoglossus_semilaevis
ENSNLEG00000014225	SMARCAD1	99	65.825	ENSDARG00000014041	smarcad1a	92	55.678	Danio_rerio
ENSNLEG00000014225	SMARCAD1	100	66.275	ENSDARG00000073721	smarcad1b	82	59.137	Danio_rerio
ENSNLEG00000014225	SMARCAD1	100	97.987	ENSDNOG00000000806	-	100	96.394	Dasypus_novemcinctus
ENSNLEG00000014225	SMARCAD1	100	97.819	ENSDORG00000012331	Smarcad1	100	93.197	Dipodomys_ordii
ENSNLEG00000014225	SMARCAD1	99	46.566	FBgn0032157	Etl1	90	40.319	Drosophila_melanogaster
ENSNLEG00000014225	SMARCAD1	95	48.342	ENSEBUG00000003969	smarcad1a	96	46.191	Eptatretus_burgeri
ENSNLEG00000014225	SMARCAD1	100	98.826	ENSEASG00005012382	SMARCAD1	100	97.179	Equus_asinus_asinus
ENSNLEG00000014225	SMARCAD1	100	98.826	ENSECAG00000011562	SMARCAD1	100	97.179	Equus_caballus
ENSNLEG00000014225	SMARCAD1	99	67.172	ENSELUG00000018535	smarcad1a	100	51.253	Esox_lucius
ENSNLEG00000014225	SMARCAD1	98	65.812	ENSELUG00000019154	smarcad1b	79	58.824	Esox_lucius
ENSNLEG00000014225	SMARCAD1	100	98.993	ENSFCAG00000003958	SMARCAD1	100	98.993	Felis_catus
ENSNLEG00000014225	SMARCAD1	100	84.087	ENSFALG00000006089	SMARCAD1	100	67.437	Ficedula_albicollis
ENSNLEG00000014225	SMARCAD1	100	98.154	ENSFDAG00000017027	SMARCAD1	100	95.906	Fukomys_damarensis
ENSNLEG00000014225	SMARCAD1	99	67.508	ENSFHEG00000012778	smarcad1a	100	62.483	Fundulus_heteroclitus
ENSNLEG00000014225	SMARCAD1	100	66.332	ENSGMOG00000018995	smarcad1a	97	57.604	Gadus_morhua
ENSNLEG00000014225	SMARCAD1	100	79.899	ENSGALG00000037339	SMARCAD1	94	75.065	Gallus_gallus
ENSNLEG00000014225	SMARCAD1	99	66.835	ENSGAFG00000013498	smarcad1a	100	46.726	Gambusia_affinis
ENSNLEG00000014225	SMARCAD1	99	66.891	ENSGACG00000007327	smarcad1a	99	58.050	Gasterosteus_aculeatus
ENSNLEG00000014225	SMARCAD1	100	85.260	ENSGAGG00000008582	SMARCAD1	100	74.035	Gopherus_agassizii
ENSNLEG00000014225	SMARCAD1	100	100.000	ENSGGOG00000023001	SMARCAD1	100	100.000	Gorilla_gorilla
ENSNLEG00000014225	SMARCAD1	100	66.946	ENSHBUG00000011042	smarcad1a	99	61.172	Haplochromis_burtoni
ENSNLEG00000014225	SMARCAD1	100	98.154	ENSHGLG00000005070	SMARCAD1	100	96.016	Heterocephalus_glaber_female
ENSNLEG00000014225	SMARCAD1	100	98.154	ENSHGLG00100006812	SMARCAD1	100	96.016	Heterocephalus_glaber_male
ENSNLEG00000014225	SMARCAD1	100	64.597	ENSHCOG00000007848	smarcad1a	98	59.306	Hippocampus_comes
ENSNLEG00000014225	SMARCAD1	100	67.114	ENSIPUG00000022817	smarcad1b	89	57.279	Ictalurus_punctatus
ENSNLEG00000014225	SMARCAD1	99	65.825	ENSIPUG00000000242	smarcad1a	93	63.393	Ictalurus_punctatus
ENSNLEG00000014225	SMARCAD1	100	98.658	ENSSTOG00000001227	SMARCAD1	100	97.371	Ictidomys_tridecemlineatus
ENSNLEG00000014225	SMARCAD1	100	98.322	ENSJJAG00000022342	Smarcad1	100	96.101	Jaculus_jaculus
ENSNLEG00000014225	SMARCAD1	98	67.182	ENSKMAG00000021351	smarcad1a	65	61.615	Kryptolebias_marmoratus
ENSNLEG00000014225	SMARCAD1	99	67.845	ENSLBEG00000008088	smarcad1a	63	65.821	Labrus_bergylta
ENSNLEG00000014225	SMARCAD1	100	71.141	ENSLOCG00000012909	smarcad1a	100	55.245	Lepisosteus_oculatus
ENSNLEG00000014225	SMARCAD1	100	95.638	ENSLAFG00000000040	SMARCAD1	100	94.639	Loxodonta_africana
ENSNLEG00000014225	SMARCAD1	100	100.000	ENSMFAG00000042606	SMARCAD1	100	99.550	Macaca_fascicularis
ENSNLEG00000014225	SMARCAD1	100	100.000	ENSMMUG00000022242	SMARCAD1	100	99.550	Macaca_mulatta
ENSNLEG00000014225	SMARCAD1	100	99.832	ENSMNEG00000038117	SMARCAD1	100	99.832	Macaca_nemestrina
ENSNLEG00000014225	SMARCAD1	100	100.000	ENSMLEG00000038333	SMARCAD1	100	100.000	Mandrillus_leucophaeus
ENSNLEG00000014225	SMARCAD1	99	68.182	ENSMAMG00000000933	smarcad1a	96	63.561	Mastacembelus_armatus
ENSNLEG00000014225	SMARCAD1	100	67.114	ENSMZEG00005005203	smarcad1a	100	49.817	Maylandia_zebra
ENSNLEG00000014225	SMARCAD1	100	80.769	ENSMGAG00000005577	SMARCAD1	100	65.088	Meleagris_gallopavo
ENSNLEG00000014225	SMARCAD1	100	97.483	ENSMAUG00000008417	Smarcad1	100	93.275	Mesocricetus_auratus
ENSNLEG00000014225	SMARCAD1	100	98.829	ENSMICG00000009746	SMARCAD1	100	97.182	Microcebus_murinus
ENSNLEG00000014225	SMARCAD1	100	97.148	ENSMOCG00000017142	Smarcad1	100	93.177	Microtus_ochrogaster
ENSNLEG00000014225	SMARCAD1	100	67.114	ENSMMOG00000000275	smarcad1a	92	64.382	Mola_mola
ENSNLEG00000014225	SMARCAD1	100	90.604	ENSMODG00000019268	SMARCAD1	100	81.660	Monodelphis_domestica
ENSNLEG00000014225	SMARCAD1	100	96.477	MGP_CAROLIEiJ_G0028458	-	77	93.979	Mus_caroli
ENSNLEG00000014225	SMARCAD1	100	96.477	ENSMUSG00000029920	Smarcad1	100	92.405	Mus_musculus
ENSNLEG00000014225	SMARCAD1	100	96.644	MGP_PahariEiJ_G0022198	Smarcad1	100	92.502	Mus_pahari
ENSNLEG00000014225	SMARCAD1	100	96.477	MGP_SPRETEiJ_G0029462	Smarcad1	100	92.405	Mus_spretus
ENSNLEG00000014225	SMARCAD1	100	98.826	ENSMPUG00000002111	SMARCAD1	100	97.276	Mustela_putorius_furo
ENSNLEG00000014225	SMARCAD1	100	96.823	ENSMLUG00000000425	SMARCAD1	100	93.482	Myotis_lucifugus
ENSNLEG00000014225	SMARCAD1	100	97.987	ENSNGAG00000000810	Smarcad1	100	94.347	Nannospalax_galili
ENSNLEG00000014225	SMARCAD1	97	67.358	ENSNBRG00000012749	smarcad1a	85	61.367	Neolamprologus_brichardi
ENSNLEG00000014225	SMARCAD1	100	97.987	ENSODEG00000004334	SMARCAD1	100	94.849	Octodon_degus
ENSNLEG00000014225	SMARCAD1	100	66.611	ENSONIG00000015059	smarcad1a	100	52.220	Oreochromis_niloticus
ENSNLEG00000014225	SMARCAD1	100	89.799	ENSOANG00000013764	SMARCAD1	100	84.783	Ornithorhynchus_anatinus
ENSNLEG00000014225	SMARCAD1	100	98.490	ENSOCUG00000017283	SMARCAD1	100	97.173	Oryctolagus_cuniculus
ENSNLEG00000014225	SMARCAD1	99	66.667	ENSORLG00000004869	smarcad1a	68	61.326	Oryzias_latipes
ENSNLEG00000014225	SMARCAD1	99	66.667	ENSORLG00020020569	smarcad1a	68	61.134	Oryzias_latipes_hni
ENSNLEG00000014225	SMARCAD1	99	66.498	ENSORLG00015009045	smarcad1a	69	61.348	Oryzias_latipes_hsok
ENSNLEG00000014225	SMARCAD1	99	66.498	ENSOMEG00000023032	smarcad1a	69	60.905	Oryzias_melastigma
ENSNLEG00000014225	SMARCAD1	100	97.492	ENSOGAG00000011444	SMARCAD1	100	96.793	Otolemur_garnettii
ENSNLEG00000014225	SMARCAD1	100	98.826	ENSOARG00000017851	SMARCAD1	100	97.082	Ovis_aries
ENSNLEG00000014225	SMARCAD1	100	100.000	ENSPPAG00000035715	SMARCAD1	100	99.903	Pan_paniscus
ENSNLEG00000014225	SMARCAD1	100	98.993	ENSPPRG00000024756	SMARCAD1	100	98.993	Panthera_pardus
ENSNLEG00000014225	SMARCAD1	100	98.662	ENSPTIG00000017868	SMARCAD1	100	96.890	Panthera_tigris_altaica
ENSNLEG00000014225	SMARCAD1	100	100.000	ENSPTRG00000023126	SMARCAD1	100	100.000	Pan_troglodytes
ENSNLEG00000014225	SMARCAD1	100	98.056	ENSPANG00000019757	SMARCAD1	100	98.056	Papio_anubis
ENSNLEG00000014225	SMARCAD1	100	84.422	ENSPSIG00000010255	SMARCAD1	100	73.301	Pelodiscus_sinensis
ENSNLEG00000014225	SMARCAD1	99	64.874	ENSPMGG00000010735	smarcad1a	95	62.722	Periophthalmus_magnuspinnatus
ENSNLEG00000014225	SMARCAD1	100	83.221	ENSPEMG00000001854	Smarcad1	100	79.142	Peromyscus_maniculatus_bairdii
ENSNLEG00000014225	SMARCAD1	99	59.701	ENSPMAG00000003516	smarcad1a	99	47.003	Petromyzon_marinus
ENSNLEG00000014225	SMARCAD1	100	90.604	ENSPCIG00000008137	SMARCAD1	98	88.874	Phascolarctos_cinereus
ENSNLEG00000014225	SMARCAD1	99	67.003	ENSPFOG00000019116	smarcad1a	64	62.430	Poecilia_formosa
ENSNLEG00000014225	SMARCAD1	99	66.835	ENSPLAG00000000108	smarcad1a	64	62.291	Poecilia_latipinna
ENSNLEG00000014225	SMARCAD1	99	67.003	ENSPMEG00000009155	smarcad1a	64	62.430	Poecilia_mexicana
ENSNLEG00000014225	SMARCAD1	99	67.508	ENSPREG00000018185	smarcad1a	94	62.587	Poecilia_reticulata
ENSNLEG00000014225	SMARCAD1	100	99.222	ENSPPYG00000014935	SMARCAD1	100	99.222	Pongo_abelii
ENSNLEG00000014225	SMARCAD1	81	98.750	ENSPCOG00000020478	SMARCAD1	89	97.561	Propithecus_coquereli
ENSNLEG00000014225	SMARCAD1	100	96.321	ENSPVAG00000001760	SMARCAD1	100	95.335	Pteropus_vampyrus
ENSNLEG00000014225	SMARCAD1	97	67.128	ENSPNYG00000010087	smarcad1a	86	60.948	Pundamilia_nyererei
ENSNLEG00000014225	SMARCAD1	99	66.667	ENSPNAG00000001663	smarcad1a	100	49.540	Pygocentrus_nattereri
ENSNLEG00000014225	SMARCAD1	100	68.121	ENSPNAG00000010099	smarcad1b	84	59.748	Pygocentrus_nattereri
ENSNLEG00000014225	SMARCAD1	100	96.812	ENSRNOG00000006391	Smarcad1	100	93.184	Rattus_norvegicus
ENSNLEG00000014225	SMARCAD1	100	100.000	ENSRBIG00000041989	SMARCAD1	100	99.513	Rhinopithecus_bieti
ENSNLEG00000014225	SMARCAD1	100	100.000	ENSRROG00000035309	SMARCAD1	100	99.513	Rhinopithecus_roxellana
ENSNLEG00000014225	SMARCAD1	100	99.664	ENSSBOG00000032114	SMARCAD1	100	99.664	Saimiri_boliviensis_boliviensis
ENSNLEG00000014225	SMARCAD1	100	91.107	ENSSHAG00000001279	SMARCAD1	100	82.529	Sarcophilus_harrisii
ENSNLEG00000014225	SMARCAD1	99	64.706	ENSSFOG00015020909	smarcad1a	100	57.772	Scleropages_formosus
ENSNLEG00000014225	SMARCAD1	99	68.013	ENSSFOG00015016814	smarcad1b	100	50.324	Scleropages_formosus
ENSNLEG00000014225	SMARCAD1	99	68.182	ENSSMAG00000001326	smarcad1a	67	62.517	Scophthalmus_maximus
ENSNLEG00000014225	SMARCAD1	99	67.340	ENSSDUG00000022338	smarcad1a	84	62.325	Seriola_dumerili
ENSNLEG00000014225	SMARCAD1	99	67.003	ENSSLDG00000024986	smarcad1a	67	61.496	Seriola_lalandi_dorsalis
ENSNLEG00000014225	SMARCAD1	100	84.590	ENSSPUG00000004633	SMARCAD1	100	84.590	Sphenodon_punctatus
ENSNLEG00000014225	SMARCAD1	99	67.508	ENSSPAG00000001970	smarcad1a	96	62.430	Stegastes_partitus
ENSNLEG00000014225	SMARCAD1	100	98.826	ENSSSCG00000009193	SMARCAD1	100	98.098	Sus_scrofa
ENSNLEG00000014225	SMARCAD1	100	85.092	ENSTGUG00000003127	SMARCAD1	100	78.189	Taeniopygia_guttata
ENSNLEG00000014225	SMARCAD1	99	68.067	ENSTNIG00000017585	smarcad1a	99	57.666	Tetraodon_nigroviridis
ENSNLEG00000014225	SMARCAD1	91	97.817	ENSTBEG00000002789	SMARCAD1	91	97.817	Tupaia_belangeri
ENSNLEG00000014225	SMARCAD1	100	98.660	ENSTTRG00000000226	SMARCAD1	100	96.028	Tursiops_truncatus
ENSNLEG00000014225	SMARCAD1	100	99.161	ENSUAMG00000022262	SMARCAD1	100	97.374	Ursus_americanus
ENSNLEG00000014225	SMARCAD1	100	99.161	ENSUMAG00000004549	SMARCAD1	100	97.663	Ursus_maritimus
ENSNLEG00000014225	SMARCAD1	100	98.490	ENSVVUG00000007271	SMARCAD1	100	97.622	Vulpes_vulpes
ENSNLEG00000014225	SMARCAD1	100	73.244	ENSXETG00000019214	smarcad1	100	65.643	Xenopus_tropicalis
ENSNLEG00000014225	SMARCAD1	99	65.878	ENSXCOG00000005232	smarcad1a	88	57.564	Xiphophorus_couchianus
ENSNLEG00000014225	SMARCAD1	99	66.667	ENSXMAG00000015350	smarcad1a	64	61.818	Xiphophorus_maculatus