EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000014493 (Gene tree)
Gene ID: 100606065
Gene Symbol: CHD1
Alias: -
Full Name: chromodomain helicase DNA binding protein 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 58243 bases
Position: chr2:113096670-113154912
Accession: 100606065
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000017650	ResIII	PF04851.15	3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000018531	CHD1-201	5130	XM_003277204	ENSNLEP00000017650	1709 (aa)	XP_003277252	G1RWM3

Gene Model

Click here to download ENSNLEG00000014493's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000014493's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000014493	CHD1	99	65.957	ENSNLEG00000012349	-	89	58.850

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000014493	CHD1	99	96.952	ENSG00000153922	CHD1	99	96.952	Homo_sapiens
ENSNLEG00000014493	CHD1	67	82.627	ENSAPOG00000005764	chd1	97	82.971	Acanthochromis_polyacanthus
ENSNLEG00000014493	CHD1	89	74.870	ENSAOCG00000023105	chd1	94	75.455	Amphiprion_ocellaris
ENSNLEG00000014493	CHD1	89	76.055	ENSAPEG00000013544	chd1	94	76.639	Amphiprion_percula
ENSNLEG00000014493	CHD1	90	75.463	ENSATEG00000010676	chd1	92	76.038	Anabas_testudineus
ENSNLEG00000014493	CHD1	71	82.319	ENSAMXG00000010843	chd1	91	83.502	Astyanax_mexicanus
ENSNLEG00000014493	CHD1	99	96.659	ENSCATG00000032035	CHD1	100	96.659	Cercocebus_atys
ENSNLEG00000014493	CHD1	99	96.370	ENSCSAG00000015339	CHD1	99	96.370	Chlorocebus_sabaeus
ENSNLEG00000014493	CHD1	100	94.854	ENSCANG00000036916	CHD1	100	94.854	Colobus_angolensis_palliatus
ENSNLEG00000014493	CHD1	99	93.724	ENSCGRG00001023943	Chd1	99	93.724	Cricetulus_griseus_chok1gshd
ENSNLEG00000014493	CHD1	99	93.724	ENSCGRG00000008652	Chd1	99	93.724	Cricetulus_griseus_crigri
ENSNLEG00000014493	CHD1	89	73.589	ENSCSEG00000009553	chd1	92	75.367	Cynoglossus_semilaevis
ENSNLEG00000014493	CHD1	92	87.283	ENSEASG00005016110	CHD1	99	97.923	Equus_asinus_asinus
ENSNLEG00000014493	CHD1	89	76.361	ENSELUG00000017677	chd1	93	76.139	Esox_lucius
ENSNLEG00000014493	CHD1	72	81.255	ENSFHEG00000021164	chd1	87	82.759	Fundulus_heteroclitus
ENSNLEG00000014493	CHD1	96	77.273	ENSGMOG00000001537	chd1	96	73.233	Gadus_morhua
ENSNLEG00000014493	CHD1	92	87.334	ENSGALG00000031327	-	96	87.460	Gallus_gallus
ENSNLEG00000014493	CHD1	83	81.694	ENSGAFG00000019880	chd1	93	82.844	Gambusia_affinis
ENSNLEG00000014493	CHD1	100	93.415	ENSGGOG00000011463	CHD1	100	93.415	Gorilla_gorilla
ENSNLEG00000014493	CHD1	88	77.141	ENSHCOG00000014222	chd1	91	77.548	Hippocampus_comes
ENSNLEG00000014493	CHD1	87	80.106	ENSIPUG00000001369	chd1	92	79.747	Ictalurus_punctatus
ENSNLEG00000014493	CHD1	62	95.229	ENSLAFG00000023183	CHD1	99	95.229	Loxodonta_africana
ENSNLEG00000014493	CHD1	100	96.669	ENSMFAG00000031226	CHD1	100	96.669	Macaca_fascicularis
ENSNLEG00000014493	CHD1	82	99.073	ENSMMUG00000014090	CHD1	98	99.073	Macaca_mulatta
ENSNLEG00000014493	CHD1	100	96.612	ENSMNEG00000045073	CHD1	100	96.612	Macaca_nemestrina
ENSNLEG00000014493	CHD1	100	92.528	ENSMLEG00000041096	CHD1	100	92.528	Mandrillus_leucophaeus
ENSNLEG00000014493	CHD1	72	80.565	ENSMZEG00005010957	chd1	94	80.640	Maylandia_zebra
ENSNLEG00000014493	CHD1	99	90.867	ENSMOCG00000019121	Chd1	99	90.867	Microtus_ochrogaster
ENSNLEG00000014493	CHD1	79	78.267	ENSMALG00000013317	chd1	95	78.219	Monopterus_albus
ENSNLEG00000014493	CHD1	99	92.686	MGP_CAROLIEiJ_G0021099	Chd1	98	96.896	Mus_caroli
ENSNLEG00000014493	CHD1	99	93.037	ENSMUSG00000023852	Chd1	98	97.084	Mus_musculus
ENSNLEG00000014493	CHD1	99	92.497	MGP_PahariEiJ_G0023414	Chd1	98	97.086	Mus_pahari
ENSNLEG00000014493	CHD1	89	73.565	ENSNBRG00000006860	chd1	91	75.149	Neolamprologus_brichardi
ENSNLEG00000014493	CHD1	97	90.036	ENSOANG00000004891	CHD1	100	90.701	Ornithorhynchus_anatinus
ENSNLEG00000014493	CHD1	59	76.794	ENSORLG00015016725	chd1	93	77.223	Oryzias_latipes_hsok
ENSNLEG00000014493	CHD1	100	95.746	ENSPPAG00000043367	CHD1	100	95.746	Pan_paniscus
ENSNLEG00000014493	CHD1	100	97.133	ENSPTRG00000017103	CHD1	100	97.133	Pan_troglodytes
ENSNLEG00000014493	CHD1	100	96.669	ENSPANG00000006387	CHD1	100	96.669	Papio_anubis
ENSNLEG00000014493	CHD1	89	76.402	ENSPKIG00000024719	chd1	92	76.823	Paramormyrops_kingsleyae
ENSNLEG00000014493	CHD1	73	81.315	ENSPMGG00000005785	chd1	93	81.315	Periophthalmus_magnuspinnatus
ENSNLEG00000014493	CHD1	99	93.372	ENSPEMG00000015939	Chd1	99	93.372	Peromyscus_maniculatus_bairdii
ENSNLEG00000014493	CHD1	50	76.533	ENSPLAG00000006473	-	85	77.765	Poecilia_latipinna
ENSNLEG00000014493	CHD1	97	72.689	ENSPREG00000004209	chd1	97	73.174	Poecilia_reticulata
ENSNLEG00000014493	CHD1	79	95.710	ENSRNOG00000014434	Chd1	95	95.488	Rattus_norvegicus
ENSNLEG00000014493	CHD1	100	93.706	ENSRBIG00000044325	CHD1	100	93.706	Rhinopithecus_bieti
ENSNLEG00000014493	CHD1	99	96.485	ENSRROG00000001726	CHD1	100	96.485	Rhinopithecus_roxellana
ENSNLEG00000014493	CHD1	72	81.766	ENSSFOG00015007161	chd1	90	82.439	Scleropages_formosus
ENSNLEG00000014493	CHD1	79	78.335	ENSSDUG00000018314	chd1	94	78.113	Seriola_dumerili
ENSNLEG00000014493	CHD1	51	83.713	ENSSLDG00000017244	chd1	84	86.019	Seriola_lalandi_dorsalis
ENSNLEG00000014493	CHD1	79	78.835	ENSSPAG00000007024	chd1	95	78.171	Stegastes_partitus
ENSNLEG00000014493	CHD1	84	97.922	ENSSSCG00000014177	CHD1	98	97.922	Sus_scrofa
ENSNLEG00000014493	CHD1	90	73.755	ENSTRUG00000010282	chd1	96	71.993	Takifugu_rubripes
ENSNLEG00000014493	CHD1	72	77.687	ENSTNIG00000007101	chd1	95	78.367	Tetraodon_nigroviridis
ENSNLEG00000014493	CHD1	97	70.846	ENSXCOG00000017184	chd1	97	70.361	Xiphophorus_couchianus
ENSNLEG00000014493	CHD1	77	77.736	ENSXMAG00000014538	chd1	95	78.621	Xiphophorus_maculatus