EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000014577 (Gene tree)
Gene ID: 100596650
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 48478 bases
Position: chr6:94211296-94259773
Accession: 100596650
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000017729	FDF	PF09532.10	3.1e-15	1	1
ENSNLEP00000017729	LSM14	PF12701.7	7.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000018615	EDC3-201	1371	XM_012507082	ENSNLEP00000017729	456 (aa)	XP_012362536	G1RWV2

Gene Model

Click here to download ENSNLEG00000014577's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000014577's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000014577	EDC3	100	89.173	ENSG00000179151	EDC3	100	100.000	Homo_sapiens
ENSNLEG00000014577	EDC3	100	60.588	ENSAPOG00000010791	edc3	100	60.588	Acanthochromis_polyacanthus
ENSNLEG00000014577	EDC3	100	50.598	ENSAPOG00000008655	EDC3	100	50.598	Acanthochromis_polyacanthus
ENSNLEG00000014577	EDC3	100	86.811	ENSAMEG00000008963	EDC3	100	86.811	Ailuropoda_melanoleuca
ENSNLEG00000014577	EDC3	100	59.528	ENSACIG00000017751	edc3	100	59.528	Amphilophus_citrinellus
ENSNLEG00000014577	EDC3	99	51.657	ENSACIG00000005330	EDC3	99	51.657	Amphilophus_citrinellus
ENSNLEG00000014577	EDC3	100	60.588	ENSAOCG00000005431	edc3	100	60.588	Amphiprion_ocellaris
ENSNLEG00000014577	EDC3	100	50.000	ENSAOCG00000009103	-	100	50.000	Amphiprion_ocellaris
ENSNLEG00000014577	EDC3	100	60.588	ENSAPEG00000000968	edc3	100	60.588	Amphiprion_percula
ENSNLEG00000014577	EDC3	100	50.000	ENSAPEG00000007841	EDC3	100	50.000	Amphiprion_percula
ENSNLEG00000014577	EDC3	100	50.476	ENSATEG00000004205	-	100	50.476	Anabas_testudineus
ENSNLEG00000014577	EDC3	100	60.511	ENSATEG00000015505	edc3	100	60.511	Anabas_testudineus
ENSNLEG00000014577	EDC3	88	76.264	ENSAPLG00000008957	EDC3	100	76.264	Anas_platyrhynchos
ENSNLEG00000014577	EDC3	76	75.063	ENSACAG00000000460	-	100	75.063	Anolis_carolinensis
ENSNLEG00000014577	EDC3	100	89.173	ENSANAG00000024078	EDC3	100	89.173	Aotus_nancymaae
ENSNLEG00000014577	EDC3	100	58.546	ENSACLG00000007232	edc3	100	58.546	Astatotilapia_calliptera
ENSNLEG00000014577	EDC3	99	50.682	ENSACLG00000018776	-	99	50.682	Astatotilapia_calliptera
ENSNLEG00000014577	EDC3	100	61.284	ENSAMXG00000001589	edc3	100	61.284	Astyanax_mexicanus
ENSNLEG00000014577	EDC3	100	87.795	ENSBTAG00000007308	EDC3	100	87.795	Bos_taurus
ENSNLEG00000014577	EDC3	100	89.173	ENSCJAG00000017681	EDC3	100	89.173	Callithrix_jacchus
ENSNLEG00000014577	EDC3	100	87.008	ENSCAFG00000017935	EDC3	100	87.008	Canis_familiaris
ENSNLEG00000014577	EDC3	100	87.008	ENSCAFG00020003909	EDC3	100	87.008	Canis_lupus_dingo
ENSNLEG00000014577	EDC3	100	87.598	ENSCHIG00000023658	EDC3	100	87.598	Capra_hircus
ENSNLEG00000014577	EDC3	100	87.598	ENSTSYG00000004822	EDC3	100	87.598	Carlito_syrichta
ENSNLEG00000014577	EDC3	100	86.024	ENSCPOG00000015595	EDC3	100	86.024	Cavia_porcellus
ENSNLEG00000014577	EDC3	100	89.567	ENSCCAG00000021663	EDC3	100	89.567	Cebus_capucinus
ENSNLEG00000014577	EDC3	100	89.173	ENSCATG00000037511	EDC3	100	89.173	Cercocebus_atys
ENSNLEG00000014577	EDC3	100	85.827	ENSCLAG00000005700	EDC3	100	85.827	Chinchilla_lanigera
ENSNLEG00000014577	EDC3	100	89.173	ENSCSAG00000014239	EDC3	100	89.173	Chlorocebus_sabaeus
ENSNLEG00000014577	EDC3	100	79.724	ENSCPBG00000024239	EDC3	100	79.724	Chrysemys_picta_bellii
ENSNLEG00000014577	EDC3	100	33.719	ENSCING00000022142	-	99	33.719	Ciona_intestinalis
ENSNLEG00000014577	EDC3	100	89.173	ENSCANG00000028699	EDC3	100	89.173	Colobus_angolensis_palliatus
ENSNLEG00000014577	EDC3	100	87.008	ENSCGRG00001013874	Edc3	100	87.008	Cricetulus_griseus_chok1gshd
ENSNLEG00000014577	EDC3	100	87.008	ENSCGRG00000011885	Edc3	100	87.008	Cricetulus_griseus_crigri
ENSNLEG00000014577	EDC3	99	60.630	ENSCSEG00000012996	edc3	99	60.630	Cynoglossus_semilaevis
ENSNLEG00000014577	EDC3	100	60.392	ENSCVAG00000008023	edc3	100	60.392	Cyprinodon_variegatus
ENSNLEG00000014577	EDC3	99	59.804	ENSDARG00000051931	edc3	99	60.234	Danio_rerio
ENSNLEG00000014577	EDC3	100	74.612	ENSDNOG00000030661	EDC3	100	74.612	Dasypus_novemcinctus
ENSNLEG00000014577	EDC3	60	98.148	ENSETEG00000002398	-	54	98.148	Echinops_telfairi
ENSNLEG00000014577	EDC3	100	88.189	ENSEASG00005005071	EDC3	100	88.189	Equus_asinus_asinus
ENSNLEG00000014577	EDC3	100	88.189	ENSECAG00000017994	EDC3	100	88.189	Equus_caballus
ENSNLEG00000014577	EDC3	100	56.920	ENSELUG00000005794	edc3	100	56.920	Esox_lucius
ENSNLEG00000014577	EDC3	100	53.229	ENSELUG00000007607	EDC3	100	53.229	Esox_lucius
ENSNLEG00000014577	EDC3	100	86.614	ENSFCAG00000002014	EDC3	100	86.614	Felis_catus
ENSNLEG00000014577	EDC3	98	75.150	ENSFALG00000004543	EDC3	96	75.150	Ficedula_albicollis
ENSNLEG00000014577	EDC3	100	85.827	ENSFDAG00000012582	EDC3	100	85.827	Fukomys_damarensis
ENSNLEG00000014577	EDC3	100	60.392	ENSFHEG00000009375	edc3	100	60.392	Fundulus_heteroclitus
ENSNLEG00000014577	EDC3	100	59.570	ENSGMOG00000002715	edc3	100	59.570	Gadus_morhua
ENSNLEG00000014577	EDC3	100	78.937	ENSGALG00000040181	EDC3	100	78.937	Gallus_gallus
ENSNLEG00000014577	EDC3	100	58.939	ENSGAFG00000014433	edc3	100	59.020	Gambusia_affinis
ENSNLEG00000014577	EDC3	99	47.409	ENSGACG00000014671	EDC3	99	48.155	Gasterosteus_aculeatus
ENSNLEG00000014577	EDC3	100	59.528	ENSGACG00000009783	edc3	100	59.528	Gasterosteus_aculeatus
ENSNLEG00000014577	EDC3	100	79.331	ENSGAGG00000023477	EDC3	100	79.331	Gopherus_agassizii
ENSNLEG00000014577	EDC3	100	89.370	ENSGGOG00000003552	EDC3	100	89.370	Gorilla_gorilla
ENSNLEG00000014577	EDC3	100	58.546	ENSHBUG00000003635	edc3	100	58.546	Haplochromis_burtoni
ENSNLEG00000014577	EDC3	99	50.682	ENSHBUG00000020817	EDC3	99	50.682	Haplochromis_burtoni
ENSNLEG00000014577	EDC3	100	58.594	ENSHCOG00000016834	edc3	100	58.708	Hippocampus_comes
ENSNLEG00000014577	EDC3	99	60.861	ENSIPUG00000005695	edc3	100	60.861	Ictalurus_punctatus
ENSNLEG00000014577	EDC3	100	88.189	ENSSTOG00000013936	EDC3	100	88.189	Ictidomys_tridecemlineatus
ENSNLEG00000014577	EDC3	100	86.024	ENSJJAG00000008074	Edc3	100	86.024	Jaculus_jaculus
ENSNLEG00000014577	EDC3	100	47.835	ENSKMAG00000001987	EDC3	100	47.835	Kryptolebias_marmoratus
ENSNLEG00000014577	EDC3	100	59.528	ENSKMAG00000001243	edc3	100	59.528	Kryptolebias_marmoratus
ENSNLEG00000014577	EDC3	100	50.775	ENSLBEG00000017984	EDC3	100	50.775	Labrus_bergylta
ENSNLEG00000014577	EDC3	100	60.392	ENSLBEG00000013435	edc3	99	60.392	Labrus_bergylta
ENSNLEG00000014577	EDC3	100	67.961	ENSLACG00000014149	EDC3	100	67.961	Latimeria_chalumnae
ENSNLEG00000014577	EDC3	99	63.922	ENSLOCG00000014625	edc3	99	63.922	Lepisosteus_oculatus
ENSNLEG00000014577	EDC3	100	86.024	ENSLAFG00000002992	EDC3	100	86.024	Loxodonta_africana
ENSNLEG00000014577	EDC3	100	88.780	ENSMFAG00000043074	EDC3	100	88.780	Macaca_fascicularis
ENSNLEG00000014577	EDC3	100	88.780	ENSMMUG00000011071	EDC3	100	88.780	Macaca_mulatta
ENSNLEG00000014577	EDC3	100	88.780	ENSMNEG00000035316	EDC3	100	88.780	Macaca_nemestrina
ENSNLEG00000014577	EDC3	100	89.173	ENSMLEG00000030372	EDC3	100	89.173	Mandrillus_leucophaeus
ENSNLEG00000014577	EDC3	100	60.904	ENSMAMG00000000505	edc3	100	60.904	Mastacembelus_armatus
ENSNLEG00000014577	EDC3	99	49.023	ENSMAMG00000005423	-	99	49.023	Mastacembelus_armatus
ENSNLEG00000014577	EDC3	99	51.172	ENSMZEG00005005654	EDC3	99	51.172	Maylandia_zebra
ENSNLEG00000014577	EDC3	100	58.546	ENSMZEG00005004892	edc3	100	58.546	Maylandia_zebra
ENSNLEG00000014577	EDC3	100	77.953	ENSMGAG00000002617	EDC3	100	77.953	Meleagris_gallopavo
ENSNLEG00000014577	EDC3	100	87.598	ENSMICG00000043190	EDC3	100	87.598	Microcebus_murinus
ENSNLEG00000014577	EDC3	100	87.008	ENSMOCG00000016205	Edc3	100	87.008	Microtus_ochrogaster
ENSNLEG00000014577	EDC3	99	59.528	ENSMMOG00000012278	edc3	99	59.528	Mola_mola
ENSNLEG00000014577	EDC3	100	83.071	ENSMODG00000009442	EDC3	100	83.071	Monodelphis_domestica
ENSNLEG00000014577	EDC3	100	60.707	ENSMALG00000008658	edc3	100	60.707	Monopterus_albus
ENSNLEG00000014577	EDC3	100	86.417	MGP_CAROLIEiJ_G0032280	Edc3	100	98.462	Mus_caroli
ENSNLEG00000014577	EDC3	100	86.024	ENSMUSG00000038957	Edc3	100	98.462	Mus_musculus
ENSNLEG00000014577	EDC3	100	86.614	MGP_PahariEiJ_G0015146	Edc3	100	98.462	Mus_pahari
ENSNLEG00000014577	EDC3	100	85.827	MGP_SPRETEiJ_G0033420	Edc3	100	98.462	Mus_spretus
ENSNLEG00000014577	EDC3	100	86.417	ENSMPUG00000017293	EDC3	100	86.417	Mustela_putorius_furo
ENSNLEG00000014577	EDC3	100	87.059	ENSMLUG00000016382	EDC3	100	87.059	Myotis_lucifugus
ENSNLEG00000014577	EDC3	100	86.614	ENSNGAG00000010923	Edc3	100	86.614	Nannospalax_galili
ENSNLEG00000014577	EDC3	99	51.172	ENSNBRG00000007881	EDC3	99	51.172	Neolamprologus_brichardi
ENSNLEG00000014577	EDC3	100	58.939	ENSNBRG00000002434	edc3	100	58.939	Neolamprologus_brichardi
ENSNLEG00000014577	EDC3	100	81.890	ENSMEUG00000009077	EDC3	100	81.890	Notamacropus_eugenii
ENSNLEG00000014577	EDC3	66	97.101	ENSOPRG00000009540	-	60	97.101	Ochotona_princeps
ENSNLEG00000014577	EDC3	100	58.743	ENSONIG00000008434	edc3	100	58.743	Oreochromis_niloticus
ENSNLEG00000014577	EDC3	99	52.242	ENSONIG00000002932	-	99	52.242	Oreochromis_niloticus
ENSNLEG00000014577	EDC3	76	79.597	ENSOCUG00000017740	EDC3	86	79.597	Oryctolagus_cuniculus
ENSNLEG00000014577	EDC3	100	57.957	ENSORLG00000004883	edc3	100	57.957	Oryzias_latipes
ENSNLEG00000014577	EDC3	100	48.828	ENSORLG00000014399	-	98	48.828	Oryzias_latipes
ENSNLEG00000014577	EDC3	100	48.828	ENSORLG00020019446	-	100	48.828	Oryzias_latipes_hni
ENSNLEG00000014577	EDC3	100	57.760	ENSORLG00020012262	edc3	100	57.760	Oryzias_latipes_hni
ENSNLEG00000014577	EDC3	100	48.249	ENSORLG00015017635	-	96	48.438	Oryzias_latipes_hsok
ENSNLEG00000014577	EDC3	100	57.617	ENSORLG00015005634	edc3	100	57.617	Oryzias_latipes_hsok
ENSNLEG00000014577	EDC3	100	49.023	ENSOMEG00000017354	EDC3	100	49.023	Oryzias_melastigma
ENSNLEG00000014577	EDC3	100	59.020	ENSOMEG00000014026	edc3	100	59.020	Oryzias_melastigma
ENSNLEG00000014577	EDC3	100	87.992	ENSOGAG00000014441	EDC3	100	87.992	Otolemur_garnettii
ENSNLEG00000014577	EDC3	100	87.230	ENSOARG00000003476	EDC3	100	87.230	Ovis_aries
ENSNLEG00000014577	EDC3	100	89.370	ENSPPAG00000040143	EDC3	100	89.370	Pan_paniscus
ENSNLEG00000014577	EDC3	100	87.008	ENSPPRG00000006257	EDC3	100	87.008	Panthera_pardus
ENSNLEG00000014577	EDC3	100	87.008	ENSPTIG00000017424	EDC3	100	87.008	Panthera_tigris_altaica
ENSNLEG00000014577	EDC3	100	89.370	ENSPTRG00000007279	EDC3	100	89.370	Pan_troglodytes
ENSNLEG00000014577	EDC3	100	89.173	ENSPANG00000015997	EDC3	100	89.173	Papio_anubis
ENSNLEG00000014577	EDC3	100	57.617	ENSPKIG00000019810	EDC3	100	57.617	Paramormyrops_kingsleyae
ENSNLEG00000014577	EDC3	100	59.570	ENSPKIG00000004416	edc3	100	60.547	Paramormyrops_kingsleyae
ENSNLEG00000014577	EDC3	100	73.819	ENSPSIG00000008474	EDC3	100	73.819	Pelodiscus_sinensis
ENSNLEG00000014577	EDC3	100	58.317	ENSPMGG00000007223	edc3	100	58.317	Periophthalmus_magnuspinnatus
ENSNLEG00000014577	EDC3	100	86.614	ENSPEMG00000015260	Edc3	100	86.614	Peromyscus_maniculatus_bairdii
ENSNLEG00000014577	EDC3	100	80.906	ENSPCIG00000006276	EDC3	70	81.065	Phascolarctos_cinereus
ENSNLEG00000014577	EDC3	100	59.922	ENSPFOG00000012204	edc3	100	60.117	Poecilia_formosa
ENSNLEG00000014577	EDC3	100	59.922	ENSPLAG00000014420	edc3	100	60.117	Poecilia_latipinna
ENSNLEG00000014577	EDC3	100	59.922	ENSPMEG00000023289	edc3	100	60.117	Poecilia_mexicana
ENSNLEG00000014577	EDC3	100	60.118	ENSPREG00000016022	edc3	100	60.118	Poecilia_reticulata
ENSNLEG00000014577	EDC3	100	88.189	ENSPPYG00000006642	EDC3	100	88.189	Pongo_abelii
ENSNLEG00000014577	EDC3	87	100.000	ENSPCAG00000002802	EDC3	88	100.000	Procavia_capensis
ENSNLEG00000014577	EDC3	100	87.795	ENSPCOG00000013364	EDC3	100	87.795	Propithecus_coquereli
ENSNLEG00000014577	EDC3	100	86.417	ENSPVAG00000014733	EDC3	100	86.417	Pteropus_vampyrus
ENSNLEG00000014577	EDC3	100	58.546	ENSPNYG00000021797	edc3	100	58.546	Pundamilia_nyererei
ENSNLEG00000014577	EDC3	99	50.682	ENSPNYG00000009669	EDC3	99	50.682	Pundamilia_nyererei
ENSNLEG00000014577	EDC3	100	60.895	ENSPNAG00000019657	edc3	100	60.895	Pygocentrus_nattereri
ENSNLEG00000014577	EDC3	99	86.535	ENSRNOG00000019579	Edc3	99	86.535	Rattus_norvegicus
ENSNLEG00000014577	EDC3	100	88.780	ENSRBIG00000019488	EDC3	100	88.780	Rhinopithecus_bieti
ENSNLEG00000014577	EDC3	100	88.780	ENSRROG00000034959	EDC3	100	88.780	Rhinopithecus_roxellana
ENSNLEG00000014577	EDC3	100	89.370	ENSSBOG00000004896	EDC3	100	89.370	Saimiri_boliviensis_boliviensis
ENSNLEG00000014577	EDC3	96	81.391	ENSSHAG00000015075	EDC3	95	81.391	Sarcophilus_harrisii
ENSNLEG00000014577	EDC3	100	54.510	ENSSFOG00015002439	edc3	100	56.226	Scleropages_formosus
ENSNLEG00000014577	EDC3	100	61.464	ENSSFOG00015016939	edc3	100	62.062	Scleropages_formosus
ENSNLEG00000014577	EDC3	99	48.269	ENSSMAG00000010176	-	99	48.269	Scophthalmus_maximus
ENSNLEG00000014577	EDC3	100	59.608	ENSSMAG00000010695	edc3	100	60.118	Scophthalmus_maximus
ENSNLEG00000014577	EDC3	100	60.000	ENSSDUG00000021844	edc3	100	60.000	Seriola_dumerili
ENSNLEG00000014577	EDC3	100	51.262	ENSSDUG00000007671	EDC3	100	51.262	Seriola_dumerili
ENSNLEG00000014577	EDC3	100	60.000	ENSSLDG00000022046	edc3	100	60.000	Seriola_lalandi_dorsalis
ENSNLEG00000014577	EDC3	75	96.721	ENSSARG00000003907	EDC3	68	96.721	Sorex_araneus
ENSNLEG00000014577	EDC3	100	79.134	ENSSPUG00000008232	EDC3	100	79.134	Sphenodon_punctatus
ENSNLEG00000014577	EDC3	100	50.000	ENSSPAG00000020327	EDC3	100	50.000	Stegastes_partitus
ENSNLEG00000014577	EDC3	100	60.707	ENSSPAG00000010009	edc3	100	60.707	Stegastes_partitus
ENSNLEG00000014577	EDC3	100	87.992	ENSSSCG00000001903	EDC3	100	87.992	Sus_scrofa
ENSNLEG00000014577	EDC3	100	78.740	ENSTGUG00000004007	EDC3	100	78.740	Taeniopygia_guttata
ENSNLEG00000014577	EDC3	100	61.100	ENSTRUG00000017078	edc3	100	61.100	Takifugu_rubripes
ENSNLEG00000014577	EDC3	100	60.078	ENSTNIG00000016047	edc3	100	60.078	Tetraodon_nigroviridis
ENSNLEG00000014577	EDC3	100	87.598	ENSTTRG00000007990	EDC3	100	87.598	Tursiops_truncatus
ENSNLEG00000014577	EDC3	100	86.811	ENSUAMG00000026710	-	100	86.811	Ursus_americanus
ENSNLEG00000014577	EDC3	100	86.811	ENSUMAG00000005006	EDC3	96	86.811	Ursus_maritimus
ENSNLEG00000014577	EDC3	76	87.037	ENSVPAG00000003499	-	79	87.037	Vicugna_pacos
ENSNLEG00000014577	EDC3	100	87.205	ENSVVUG00000018601	EDC3	100	87.205	Vulpes_vulpes
ENSNLEG00000014577	EDC3	64	69.540	ENSXETG00000010622	edc3	99	70.690	Xenopus_tropicalis
ENSNLEG00000014577	EDC3	100	59.921	ENSXMAG00000007377	edc3	100	59.921	Xiphophorus_maculatus