EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000014794 (Gene tree)
Gene ID: 100603557
Gene Symbol: TRA2A
Alias: AWMS1|htra-2-alpha|tra2a
Full Name: transformer 2 alpha homolog
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 30577 bases
Position: chr17:85239332-85269908
Accession: 100603557
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000036410	RRM_1	PF00076.22	1e-19	1	1
ENSNLEP00000039037	RRM_1	PF00076.22	1e-19	1	1
ENSNLEP00000017990	RRM_1	PF00076.22	2.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000052398	TRA2A-202	2212	XM_012496814	ENSNLEP00000036410	180 (aa)	XP_012352268	A0A2I3GYT0
ENSNLET00000037968	TRA2A-203	2125	XM_012496812	ENSNLEP00000039037	181 (aa)	XP_012352266	A0A2I3H6D7
ENSNLET00000018885	TRA2A-201	1824	XM_003270403	ENSNLEP00000017990	282 (aa)	XP_003270451	G1RXL3

Gene Model

Click here to download ENSNLEG00000014794's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000014794's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000014794	TRA2A	87	71.795	ENSNLEG00000035272	TRA2B	80	63.968
ENSNLEG00000014794	TRA2A	100	71.111	ENSNLEG00000029659	-	88	76.316
ENSNLEG00000014794	TRA2A	60	37.097	ENSNLEG00000016303	ELAVL4	74	35.821

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000014794	TRA2A	100	100.000	ENSG00000164548	TRA2A	100	100.000	Homo_sapiens
ENSNLEG00000014794	TRA2A	84	83.553	ENSAPOG00000017425	tra2a	90	75.277	Acanthochromis_polyacanthus
ENSNLEG00000014794	TRA2A	99	97.253	ENSAMEG00000003501	TRA2A	84	97.786	Ailuropoda_melanoleuca
ENSNLEG00000014794	TRA2A	84	86.842	ENSACIG00000001333	tra2a	79	87.500	Amphilophus_citrinellus
ENSNLEG00000014794	TRA2A	90	76.015	ENSAOCG00000015445	tra2a	90	76.015	Amphiprion_ocellaris
ENSNLEG00000014794	TRA2A	84	84.211	ENSAPEG00000018557	tra2a	90	76.015	Amphiprion_percula
ENSNLEG00000014794	TRA2A	90	77.491	ENSATEG00000000671	tra2a	90	77.491	Anabas_testudineus
ENSNLEG00000014794	TRA2A	98	93.820	ENSAPLG00000013689	TRA2A	100	94.052	Anas_platyrhynchos
ENSNLEG00000014794	TRA2A	100	96.175	ENSACAG00000013502	TRA2A	100	95.423	Anolis_carolinensis
ENSNLEG00000014794	TRA2A	94	100.000	ENSANAG00000035184	TRA2A	100	79.787	Aotus_nancymaae
ENSNLEG00000014794	TRA2A	90	78.967	ENSACLG00000024845	tra2a	90	78.967	Astatotilapia_calliptera
ENSNLEG00000014794	TRA2A	87	90.000	ENSAMXG00000005553	tra2a	100	76.190	Astyanax_mexicanus
ENSNLEG00000014794	TRA2A	100	99.645	ENSBTAG00000012622	TRA2A	100	99.645	Bos_taurus
ENSNLEG00000014794	TRA2A	94	98.106	ENSCJAG00000045802	-	100	98.106	Callithrix_jacchus
ENSNLEG00000014794	TRA2A	100	100.000	ENSCJAG00000001509	-	100	100.000	Callithrix_jacchus
ENSNLEG00000014794	TRA2A	99	99.642	ENSCAFG00000002788	TRA2A	100	99.642	Canis_familiaris
ENSNLEG00000014794	TRA2A	100	98.343	ENSCAFG00020002745	TRA2A	95	98.819	Canis_lupus_dingo
ENSNLEG00000014794	TRA2A	100	100.000	ENSTSYG00000000388	TRA2A	100	100.000	Carlito_syrichta
ENSNLEG00000014794	TRA2A	86	86.364	ENSCAPG00000017377	TRA2A	87	86.722	Cavia_aperea
ENSNLEG00000014794	TRA2A	100	100.000	ENSCPOG00000010739	TRA2A	100	100.000	Cavia_porcellus
ENSNLEG00000014794	TRA2A	100	100.000	ENSCCAG00000019576	TRA2A	100	100.000	Cebus_capucinus
ENSNLEG00000014794	TRA2A	100	100.000	ENSCATG00000041219	TRA2A	100	100.000	Cercocebus_atys
ENSNLEG00000014794	TRA2A	100	100.000	ENSCLAG00000007917	TRA2A	100	100.000	Chinchilla_lanigera
ENSNLEG00000014794	TRA2A	99	100.000	ENSCSAG00000014051	TRA2A	99	100.000	Chlorocebus_sabaeus
ENSNLEG00000014794	TRA2A	100	100.000	ENSCHOG00000001130	TRA2A	100	99.645	Choloepus_hoffmanni
ENSNLEG00000014794	TRA2A	100	97.238	ENSCPBG00000022466	TRA2A	100	96.479	Chrysemys_picta_bellii
ENSNLEG00000014794	TRA2A	100	100.000	ENSCANG00000031292	TRA2A	100	100.000	Colobus_angolensis_palliatus
ENSNLEG00000014794	TRA2A	100	98.907	ENSCGRG00001019980	Tra2a	100	98.592	Cricetulus_griseus_chok1gshd
ENSNLEG00000014794	TRA2A	100	98.907	ENSCGRG00000006087	Tra2a	100	98.529	Cricetulus_griseus_crigri
ENSNLEG00000014794	TRA2A	90	71.062	ENSCSEG00000012193	tra2a	90	71.795	Cynoglossus_semilaevis
ENSNLEG00000014794	TRA2A	83	77.515	ENSDARG00000007863	tra2a	90	76.471	Danio_rerio
ENSNLEG00000014794	TRA2A	100	100.000	ENSDNOG00000039446	TRA2A	100	99.645	Dasypus_novemcinctus
ENSNLEG00000014794	TRA2A	100	100.000	ENSDORG00000009361	Tra2a	100	99.291	Dipodomys_ordii
ENSNLEG00000014794	TRA2A	100	98.370	ENSETEG00000007250	TRA2A	100	82.230	Echinops_telfairi
ENSNLEG00000014794	TRA2A	100	99.645	ENSEASG00005022002	TRA2A	100	99.645	Equus_asinus_asinus
ENSNLEG00000014794	TRA2A	100	99.645	ENSECAG00000011508	TRA2A	100	99.645	Equus_caballus
ENSNLEG00000014794	TRA2A	100	98.936	ENSEEUG00000015674	TRA2A	100	98.936	Erinaceus_europaeus
ENSNLEG00000014794	TRA2A	76	74.576	ENSELUG00000005846	tra2a	91	69.360	Esox_lucius
ENSNLEG00000014794	TRA2A	100	99.645	ENSFCAG00000005361	TRA2A	100	99.645	Felis_catus
ENSNLEG00000014794	TRA2A	100	93.923	ENSFALG00000009605	TRA2A	100	94.815	Ficedula_albicollis
ENSNLEG00000014794	TRA2A	100	99.451	ENSFDAG00000004949	TRA2A	100	99.293	Fukomys_damarensis
ENSNLEG00000014794	TRA2A	80	82.237	ENSGMOG00000013740	tra2a	91	69.675	Gadus_morhua
ENSNLEG00000014794	TRA2A	100	94.366	ENSGALG00000010973	TRA2A	100	94.366	Gallus_gallus
ENSNLEG00000014794	TRA2A	84	83.439	ENSGACG00000006878	tra2a	89	75.581	Gasterosteus_aculeatus
ENSNLEG00000014794	TRA2A	100	96.133	ENSGAGG00000005793	TRA2A	100	95.775	Gopherus_agassizii
ENSNLEG00000014794	TRA2A	100	100.000	ENSGGOG00000009053	TRA2A	100	100.000	Gorilla_gorilla
ENSNLEG00000014794	TRA2A	90	79.705	ENSHBUG00000018234	tra2a	90	79.705	Haplochromis_burtoni
ENSNLEG00000014794	TRA2A	100	100.000	ENSHGLG00000012168	TRA2A	100	100.000	Heterocephalus_glaber_female
ENSNLEG00000014794	TRA2A	100	100.000	ENSHGLG00100014577	TRA2A	100	100.000	Heterocephalus_glaber_male
ENSNLEG00000014794	TRA2A	61	78.182	ENSHCOG00000018058	-	99	76.786	Hippocampus_comes
ENSNLEG00000014794	TRA2A	62	61.979	ENSHCOG00000006320	tra2a	95	62.304	Hippocampus_comes
ENSNLEG00000014794	TRA2A	100	64.921	ENSHCOG00000006314	tra2a	80	63.804	Hippocampus_comes
ENSNLEG00000014794	TRA2A	100	100.000	ENSSTOG00000012073	TRA2A	100	100.000	Ictidomys_tridecemlineatus
ENSNLEG00000014794	TRA2A	100	100.000	ENSJJAG00000022787	Tra2a	100	99.291	Jaculus_jaculus
ENSNLEG00000014794	TRA2A	84	77.457	ENSLBEG00000005297	tra2a	88	75.479	Labrus_bergylta
ENSNLEG00000014794	TRA2A	90	88.189	ENSLACG00000014765	TRA2A	90	88.189	Latimeria_chalumnae
ENSNLEG00000014794	TRA2A	90	77.491	ENSLOCG00000011615	-	90	77.491	Lepisosteus_oculatus
ENSNLEG00000014794	TRA2A	63	85.841	ENSLOCG00000009558	-	58	79.769	Lepisosteus_oculatus
ENSNLEG00000014794	TRA2A	100	99.647	ENSLAFG00000006598	TRA2A	100	99.647	Loxodonta_africana
ENSNLEG00000014794	TRA2A	100	100.000	ENSMFAG00000043211	TRA2A	100	100.000	Macaca_fascicularis
ENSNLEG00000014794	TRA2A	100	100.000	ENSMMUG00000006286	TRA2A	100	100.000	Macaca_mulatta
ENSNLEG00000014794	TRA2A	100	100.000	ENSMNEG00000040670	TRA2A	100	100.000	Macaca_nemestrina
ENSNLEG00000014794	TRA2A	100	100.000	ENSMLEG00000032154	TRA2A	100	100.000	Mandrillus_leucophaeus
ENSNLEG00000014794	TRA2A	76	80.687	ENSMAMG00000008575	tra2a	90	81.034	Mastacembelus_armatus
ENSNLEG00000014794	TRA2A	90	78.967	ENSMZEG00005009142	tra2a	90	78.967	Maylandia_zebra
ENSNLEG00000014794	TRA2A	100	93.923	ENSMGAG00000010514	TRA2A	100	94.118	Meleagris_gallopavo
ENSNLEG00000014794	TRA2A	100	83.978	ENSMICG00000036849	-	88	76.680	Microcebus_murinus
ENSNLEG00000014794	TRA2A	100	100.000	ENSMICG00000043639	-	100	100.000	Microcebus_murinus
ENSNLEG00000014794	TRA2A	90	91.358	ENSMOCG00000010249	-	63	90.419	Microtus_ochrogaster
ENSNLEG00000014794	TRA2A	71	82.587	ENSMOCG00000006467	-	97	81.592	Microtus_ochrogaster
ENSNLEG00000014794	TRA2A	87	82.166	ENSMMOG00000020174	tra2a	83	79.583	Mola_mola
ENSNLEG00000014794	TRA2A	100	98.895	ENSMODG00000000807	TRA2A	100	98.227	Monodelphis_domestica
ENSNLEG00000014794	TRA2A	85	77.308	ENSMALG00000020875	tra2a	90	76.277	Monopterus_albus
ENSNLEG00000014794	TRA2A	100	98.907	ENSMUSG00000029817	Tra2a	100	98.592	Mus_musculus
ENSNLEG00000014794	TRA2A	100	98.907	MGP_PahariEiJ_G0022115	Tra2a	100	98.239	Mus_pahari
ENSNLEG00000014794	TRA2A	100	98.907	MGP_SPRETEiJ_G0029368	Tra2a	100	98.592	Mus_spretus
ENSNLEG00000014794	TRA2A	100	99.448	ENSMPUG00000013480	TRA2A	100	99.291	Mustela_putorius_furo
ENSNLEG00000014794	TRA2A	100	98.587	ENSMLUG00000013972	TRA2A	100	98.587	Myotis_lucifugus
ENSNLEG00000014794	TRA2A	100	99.448	ENSNGAG00000023805	Tra2a	100	98.582	Nannospalax_galili
ENSNLEG00000014794	TRA2A	84	89.542	ENSNBRG00000005992	tra2a	73	90.850	Neolamprologus_brichardi
ENSNLEG00000014794	TRA2A	100	98.901	ENSMEUG00000001202	TRA2A	100	97.880	Notamacropus_eugenii
ENSNLEG00000014794	TRA2A	100	99.448	ENSOPRG00000007606	TRA2A	100	98.582	Ochotona_princeps
ENSNLEG00000014794	TRA2A	100	100.000	ENSODEG00000008335	TRA2A	100	100.000	Octodon_degus
ENSNLEG00000014794	TRA2A	90	78.832	ENSONIG00000004503	tra2a	90	78.832	Oreochromis_niloticus
ENSNLEG00000014794	TRA2A	89	88.760	ENSOANG00000014202	TRA2A	90	87.984	Ornithorhynchus_anatinus
ENSNLEG00000014794	TRA2A	100	100.000	ENSOCUG00000024139	TRA2A	100	99.645	Oryctolagus_cuniculus
ENSNLEG00000014794	TRA2A	84	75.658	ENSORLG00000022191	tra2a	60	74.251	Oryzias_latipes
ENSNLEG00000014794	TRA2A	84	75.000	ENSORLG00020003490	tra2a	60	73.653	Oryzias_latipes_hni
ENSNLEG00000014794	TRA2A	84	74.342	ENSORLG00015015485	tra2a	60	73.054	Oryzias_latipes_hsok
ENSNLEG00000014794	TRA2A	84	73.026	ENSOMEG00000017864	tra2a	60	71.856	Oryzias_melastigma
ENSNLEG00000014794	TRA2A	100	100.000	ENSOGAG00000009733	TRA2A	99	97.143	Otolemur_garnettii
ENSNLEG00000014794	TRA2A	100	97.283	ENSOARG00000002323	-	100	90.175	Ovis_aries
ENSNLEG00000014794	TRA2A	100	98.582	ENSOARG00000013147	TRA2A	100	98.582	Ovis_aries
ENSNLEG00000014794	TRA2A	99	100.000	ENSPPAG00000034382	TRA2A	99	100.000	Pan_paniscus
ENSNLEG00000014794	TRA2A	100	99.645	ENSPPRG00000015216	TRA2A	100	99.645	Panthera_pardus
ENSNLEG00000014794	TRA2A	100	99.645	ENSPTIG00000021114	TRA2A	100	99.645	Panthera_tigris_altaica
ENSNLEG00000014794	TRA2A	100	100.000	ENSPTRG00000018988	TRA2A	100	100.000	Pan_troglodytes
ENSNLEG00000014794	TRA2A	100	100.000	ENSPTRG00000046098	-	100	100.000	Pan_troglodytes
ENSNLEG00000014794	TRA2A	100	100.000	ENSPANG00000014541	TRA2A	100	100.000	Papio_anubis
ENSNLEG00000014794	TRA2A	90	76.384	ENSPKIG00000012298	tra2a	90	75.646	Paramormyrops_kingsleyae
ENSNLEG00000014794	TRA2A	100	95.580	ENSPSIG00000014993	TRA2A	90	94.378	Pelodiscus_sinensis
ENSNLEG00000014794	TRA2A	100	99.451	ENSPEMG00000008564	-	100	98.940	Peromyscus_maniculatus_bairdii
ENSNLEG00000014794	TRA2A	90	69.939	ENSPMAG00000007947	tra2a	59	69.697	Petromyzon_marinus
ENSNLEG00000014794	TRA2A	100	99.448	ENSPCIG00000007917	TRA2A	100	98.227	Phascolarctos_cinereus
ENSNLEG00000014794	TRA2A	100	100.000	ENSPPYG00000017728	TRA2A	100	100.000	Pongo_abelii
ENSNLEG00000014794	TRA2A	99	98.929	ENSPCAG00000004148	TRA2A	100	98.929	Procavia_capensis
ENSNLEG00000014794	TRA2A	100	85.816	ENSPCOG00000020465	TRA2A	100	85.816	Propithecus_coquereli
ENSNLEG00000014794	TRA2A	100	99.293	ENSPVAG00000011298	TRA2A	100	99.293	Pteropus_vampyrus
ENSNLEG00000014794	TRA2A	84	87.821	ENSPNYG00000020134	tra2a	76	87.821	Pundamilia_nyererei
ENSNLEG00000014794	TRA2A	90	73.432	ENSPNAG00000000482	tra2a	90	71.218	Pygocentrus_nattereri
ENSNLEG00000014794	TRA2A	100	98.907	ENSRNOG00000009156	Tra2a	100	98.592	Rattus_norvegicus
ENSNLEG00000014794	TRA2A	62	100.000	ENSRBIG00000036805	TRA2A	66	100.000	Rhinopithecus_bieti
ENSNLEG00000014794	TRA2A	100	100.000	ENSRROG00000030758	TRA2A	100	100.000	Rhinopithecus_roxellana
ENSNLEG00000014794	TRA2A	100	100.000	ENSSBOG00000031562	TRA2A	100	100.000	Saimiri_boliviensis_boliviensis
ENSNLEG00000014794	TRA2A	100	99.448	ENSSHAG00000005727	TRA2A	88	95.600	Sarcophilus_harrisii
ENSNLEG00000014794	TRA2A	90	80.237	ENSSFOG00015014004	tra2a	90	74.908	Scleropages_formosus
ENSNLEG00000014794	TRA2A	86	81.410	ENSSMAG00000014242	tra2a	90	73.432	Scophthalmus_maximus
ENSNLEG00000014794	TRA2A	90	83.594	ENSSDUG00000005610	tra2a	89	83.594	Seriola_dumerili
ENSNLEG00000014794	TRA2A	84	87.500	ENSSLDG00000025577	tra2a	81	88.158	Seriola_lalandi_dorsalis
ENSNLEG00000014794	TRA2A	100	78.014	ENSSARG00000012900	TRA2A	100	78.014	Sorex_araneus
ENSNLEG00000014794	TRA2A	100	97.283	ENSSPUG00000006143	TRA2A	100	96.516	Sphenodon_punctatus
ENSNLEG00000014794	TRA2A	90	78.967	ENSSPAG00000004184	tra2a	90	78.967	Stegastes_partitus
ENSNLEG00000014794	TRA2A	100	99.645	ENSSSCG00000015387	TRA2A	100	99.645	Sus_scrofa
ENSNLEG00000014794	TRA2A	86	89.032	ENSTGUG00000002795	TRA2A	62	89.222	Taeniopygia_guttata
ENSNLEG00000014794	TRA2A	100	83.333	ENSTBEG00000013773	TRA2A	100	83.333	Tupaia_belangeri
ENSNLEG00000014794	TRA2A	100	99.291	ENSTTRG00000008922	TRA2A	100	99.291	Tursiops_truncatus
ENSNLEG00000014794	TRA2A	100	98.352	ENSUMAG00000001181	TRA2A	94	98.352	Ursus_maritimus
ENSNLEG00000014794	TRA2A	100	85.461	ENSVPAG00000001829	TRA2A	100	85.461	Vicugna_pacos
ENSNLEG00000014794	TRA2A	100	99.645	ENSVVUG00000001045	TRA2A	100	99.645	Vulpes_vulpes
ENSNLEG00000014794	TRA2A	90	83.270	ENSXETG00000007397	tra2a	90	83.270	Xenopus_tropicalis