EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000015218 (Gene tree)
Gene ID: 100585834
Gene Symbol: -
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3H
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 14089 bases
Position: chr7b:11543180-11557268
Accession: 100585834
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000018472	APOBEC_N	PF08210.11	2.2e-35	1	1
ENSNLEP00000018472	APOBEC_C	PF05240.14	7.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000019397	-	1045	XM_012507688	ENSNLEP00000018472	211 (aa)	XP_012363142	G1RYZ5

Gene Model

Click here to download ENSNLEG00000015218's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000015218's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000015218	-	88	33.333	ENSNLEG00000015215	-	94	33.838
ENSNLEG00000015218	-	86	35.450	ENSNLEG00000028392	APOBEC3C	96	35.450
ENSNLEG00000015218	-	60	41.284	ENSNLEG00000035811	-	62	41.284
ENSNLEG00000015218	-	76	37.008	ENSNLEG00000018922	-	98	37.008
ENSNLEG00000015218	-	60	33.858	ENSNLEG00000005342	APOBEC1	53	33.858
ENSNLEG00000015218	-	93	33.333	ENSNLEG00000001917	AICDA	98	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000015218	-	87	87.978	ENSG00000100298	APOBEC3H	100	87.978	Homo_sapiens
ENSNLEG00000015218	-	94	47.291	ENSAMEG00000010818	-	85	47.291	Ailuropoda_melanoleuca
ENSNLEG00000015218	-	94	71.287	ENSANAG00000025410	APOBEC3H	96	70.233	Aotus_nancymaae
ENSNLEG00000015218	-	94	50.000	ENSBTAG00000007755	APOBEC3H	94	50.000	Bos_taurus
ENSNLEG00000015218	-	86	70.166	ENSCJAG00000012524	APOBEC3H	91	69.286	Callithrix_jacchus
ENSNLEG00000015218	-	94	46.465	ENSCAFG00000001361	APOBEC3Z3	100	46.465	Canis_familiaris
ENSNLEG00000015218	-	95	45.000	ENSCAFG00020002584	-	94	46.486	Canis_lupus_dingo
ENSNLEG00000015218	-	94	49.730	ENSCHIG00000026580	-	98	49.730	Capra_hircus
ENSNLEG00000015218	-	85	50.273	ENSTSYG00000032894	-	100	51.124	Carlito_syrichta
ENSNLEG00000015218	-	98	53.922	ENSCPOG00000009257	-	92	53.922	Cavia_porcellus
ENSNLEG00000015218	-	94	71.642	ENSCCAG00000008525	APOBEC3H	100	71.495	Cebus_capucinus
ENSNLEG00000015218	-	86	85.083	ENSCATG00000030302	APOBEC3H	100	85.083	Cercocebus_atys
ENSNLEG00000015218	-	96	53.695	ENSCLAG00000016615	-	99	53.695	Chinchilla_lanigera
ENSNLEG00000015218	-	100	83.412	ENSCSAG00000006371	APOBEC3H	100	83.412	Chlorocebus_sabaeus
ENSNLEG00000015218	-	95	52.451	ENSCGRG00001022976	Apobec3	92	52.451	Cricetulus_griseus_chok1gshd
ENSNLEG00000015218	-	95	52.451	ENSCGRG00000005621	Apobec3	93	52.451	Cricetulus_griseus_crigri
ENSNLEG00000015218	-	85	50.811	ENSDORG00000027271	-	99	42.857	Dipodomys_ordii
ENSNLEG00000015218	-	95	54.229	ENSECAG00000007726	APOBEC3H	85	54.229	Equus_caballus
ENSNLEG00000015218	-	94	50.754	ENSFCAG00000005251	APOBEC3Z3	99	50.000	Felis_catus
ENSNLEG00000015218	-	85	52.222	ENSSTOG00000007125	-	85	52.222	Ictidomys_tridecemlineatus
ENSNLEG00000015218	-	84	52.206	ENSJJAG00000016840	-	78	52.206	Jaculus_jaculus
ENSNLEG00000015218	-	87	48.315	ENSLAFG00000027404	-	95	48.315	Loxodonta_africana
ENSNLEG00000015218	-	100	86.256	ENSMFAG00000031827	APOBEC3H	100	86.256	Macaca_fascicularis
ENSNLEG00000015218	-	100	85.782	ENSMMUG00000001016	APOBEC3H	100	85.782	Macaca_mulatta
ENSNLEG00000015218	-	100	86.256	ENSMNEG00000039259	APOBEC3H	100	86.256	Macaca_nemestrina
ENSNLEG00000015218	-	100	85.308	ENSMLEG00000033417	APOBEC3H	100	85.308	Mandrillus_leucophaeus
ENSNLEG00000015218	-	95	50.490	ENSMAUG00000011683	Apobec3	88	50.490	Mesocricetus_auratus
ENSNLEG00000015218	-	94	49.246	ENSMOCG00000021576	Apobec3	80	50.251	Microtus_ochrogaster
ENSNLEG00000015218	-	95	47.030	MGP_CAROLIEiJ_G0020029	Apobec3	98	47.030	Mus_caroli
ENSNLEG00000015218	-	95	45.545	ENSMUSG00000009585	Apobec3	97	48.454	Mus_musculus
ENSNLEG00000015218	-	95	47.317	MGP_PahariEiJ_G0020031	-	80	47.317	Mus_pahari
ENSNLEG00000015218	-	95	45.050	MGP_SPRETEiJ_G0020927	Apobec3	85	45.050	Mus_spretus
ENSNLEG00000015218	-	94	48.744	ENSMPUG00000013239	-	87	48.744	Mustela_putorius_furo
ENSNLEG00000015218	-	96	48.500	ENSNGAG00000018998	Apobec3	100	48.500	Nannospalax_galili
ENSNLEG00000015218	-	89	39.362	ENSOCUG00000023913	-	89	39.362	Oryctolagus_cuniculus
ENSNLEG00000015218	-	94	50.000	ENSOARG00000016290	APOBEC3F	97	50.000	Ovis_aries
ENSNLEG00000015218	-	87	85.792	ENSPPAG00000036522	APOBEC3H	100	85.792	Pan_paniscus
ENSNLEG00000015218	-	79	35.057	ENSPPRG00000003675	-	88	35.057	Panthera_pardus
ENSNLEG00000015218	-	94	50.754	ENSPPRG00000003941	-	99	50.754	Panthera_pardus
ENSNLEG00000015218	-	94	50.754	ENSPTIG00000010283	-	99	50.754	Panthera_tigris_altaica
ENSNLEG00000015218	-	87	85.792	ENSPTRG00000014390	APOBEC3H	100	85.792	Pan_troglodytes
ENSNLEG00000015218	-	100	86.256	ENSPANG00000010774	APOBEC3H	100	86.256	Papio_anubis
ENSNLEG00000015218	-	95	47.059	ENSPEMG00000000456	Apobec3	77	47.059	Peromyscus_maniculatus_bairdii
ENSNLEG00000015218	-	95	91.542	ENSPPYG00000011834	-	100	90.995	Pongo_abelii
ENSNLEG00000015218	-	85	42.222	ENSPCAG00000015655	-	99	42.222	Procavia_capensis
ENSNLEG00000015218	-	64	35.075	ENSPVAG00000024267	-	98	35.075	Pteropus_vampyrus
ENSNLEG00000015218	-	60	37.008	ENSPVAG00000024161	-	93	37.008	Pteropus_vampyrus
ENSNLEG00000015218	-	84	51.685	ENSPVAG00000009462	-	98	51.685	Pteropus_vampyrus
ENSNLEG00000015218	-	87	50.000	ENSRNOG00000016852	Apobec3	83	50.000	Rattus_norvegicus
ENSNLEG00000015218	-	100	85.782	ENSRBIG00000029088	APOBEC3H	100	85.782	Rhinopithecus_bieti
ENSNLEG00000015218	-	100	84.834	ENSRROG00000024699	APOBEC3H	100	84.834	Rhinopithecus_roxellana
ENSNLEG00000015218	-	95	66.010	ENSSBOG00000030005	APOBEC3H	99	72.857	Saimiri_boliviensis_boliviensis
ENSNLEG00000015218	-	94	52.717	ENSSSCG00000000091	APOBEC3B	92	52.133	Sus_scrofa
ENSNLEG00000015218	-	82	52.326	ENSTBEG00000001532	-	98	52.326	Tupaia_belangeri
ENSNLEG00000015218	-	85	53.333	ENSTTRG00000001266	-	99	53.333	Tursiops_truncatus
ENSNLEG00000015218	-	85	49.198	ENSUAMG00000004427	-	83	49.198	Ursus_americanus
ENSNLEG00000015218	-	94	51.515	ENSUMAG00000014435	-	99	51.515	Ursus_maritimus
ENSNLEG00000015218	-	62	53.846	ENSVPAG00000011108	-	98	53.846	Vicugna_pacos