EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000015327 (Gene tree)
Gene ID: 100604282
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 57330 bases
Position: chr12:28513951-28571280
Accession: 100604282
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000018612	zf-CCCH	PF00642.24	0.00029	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000019542	RC3H1-201	5621	XM_003258905	ENSNLEP00000018612	1133 (aa)	XP_003258953	G1RZD5

Gene Model

Click here to download ENSNLEG00000015327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000015327's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000015327	RC3H1	92	53.860	ENSNLEG00000017204	RC3H2	94	83.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000015327	RC3H1	100	99.382	ENSG00000135870	RC3H1	100	99.382	Homo_sapiens
ENSNLEG00000015327	RC3H1	100	96.911	ENSAMEG00000015657	RC3H1	100	96.911	Ailuropoda_melanoleuca
ENSNLEG00000015327	RC3H1	100	88.143	ENSAPLG00000005341	RC3H1	100	88.143	Anas_platyrhynchos
ENSNLEG00000015327	RC3H1	100	85.340	ENSACAG00000015271	RC3H1	100	85.340	Anolis_carolinensis
ENSNLEG00000015327	RC3H1	100	98.853	ENSANAG00000036716	RC3H1	100	98.853	Aotus_nancymaae
ENSNLEG00000015327	RC3H1	100	95.763	ENSBTAG00000052708	RC3H1	100	95.763	Bos_taurus
ENSNLEG00000015327	RC3H1	100	98.500	ENSCJAG00000009106	RC3H1	100	98.500	Callithrix_jacchus
ENSNLEG00000015327	RC3H1	100	96.911	ENSCAFG00000014434	RC3H1	100	96.911	Canis_familiaris
ENSNLEG00000015327	RC3H1	100	96.825	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSNLEG00000015327	RC3H1	100	96.117	ENSCHIG00000002873	RC3H1	100	96.117	Capra_hircus
ENSNLEG00000015327	RC3H1	99	95.410	ENSTSYG00000003913	RC3H1	99	95.410	Carlito_syrichta
ENSNLEG00000015327	RC3H1	100	91.446	ENSCPOG00000004349	RC3H1	100	91.358	Cavia_porcellus
ENSNLEG00000015327	RC3H1	100	96.470	ENSCCAG00000025652	RC3H1	100	96.470	Cebus_capucinus
ENSNLEG00000015327	RC3H1	100	99.206	ENSCATG00000033497	RC3H1	100	99.206	Cercocebus_atys
ENSNLEG00000015327	RC3H1	100	95.062	ENSCLAG00000011267	RC3H1	100	95.062	Chinchilla_lanigera
ENSNLEG00000015327	RC3H1	96	98.987	ENSCSAG00000011823	RC3H1	85	98.987	Chlorocebus_sabaeus
ENSNLEG00000015327	RC3H1	100	89.737	ENSCPBG00000014670	RC3H1	100	96.304	Chrysemys_picta_bellii
ENSNLEG00000015327	RC3H1	100	99.206	ENSCANG00000032120	RC3H1	100	99.206	Colobus_angolensis_palliatus
ENSNLEG00000015327	RC3H1	100	94.440	ENSCGRG00001020812	Rc3h1	100	93.998	Cricetulus_griseus_chok1gshd
ENSNLEG00000015327	RC3H1	100	94.440	ENSCGRG00000011952	Rc3h1	100	93.998	Cricetulus_griseus_crigri
ENSNLEG00000015327	RC3H1	55	95.016	ENSDNOG00000011494	RC3H1	99	95.016	Dasypus_novemcinctus
ENSNLEG00000015327	RC3H1	100	95.940	ENSDORG00000004855	Rc3h1	100	95.940	Dipodomys_ordii
ENSNLEG00000015327	RC3H1	81	96.647	ENSETEG00000012064	RC3H1	87	96.647	Echinops_telfairi
ENSNLEG00000015327	RC3H1	100	95.852	ENSEASG00005017000	RC3H1	100	95.852	Equus_asinus_asinus
ENSNLEG00000015327	RC3H1	100	95.675	ENSECAG00000021208	RC3H1	100	95.675	Equus_caballus
ENSNLEG00000015327	RC3H1	83	97.059	ENSEEUG00000014861	RC3H1	93	83.302	Erinaceus_europaeus
ENSNLEG00000015327	RC3H1	100	97.264	ENSFCAG00000014924	RC3H1	100	97.264	Felis_catus
ENSNLEG00000015327	RC3H1	100	87.598	ENSFALG00000002947	RC3H1	100	87.074	Ficedula_albicollis
ENSNLEG00000015327	RC3H1	100	94.885	ENSFDAG00000013303	RC3H1	100	94.885	Fukomys_damarensis
ENSNLEG00000015327	RC3H1	100	87.292	ENSGALG00000004587	RC3H1	100	87.292	Gallus_gallus
ENSNLEG00000015327	RC3H1	100	88.081	ENSGAGG00000018194	RC3H1	100	88.344	Gopherus_agassizii
ENSNLEG00000015327	RC3H1	100	92.436	ENSGGOG00000005735	RC3H1	100	92.436	Gorilla_gorilla
ENSNLEG00000015327	RC3H1	88	88.498	ENSHGLG00000004183	-	99	88.451	Heterocephalus_glaber_female
ENSNLEG00000015327	RC3H1	100	94.356	ENSHGLG00100008577	RC3H1	100	94.356	Heterocephalus_glaber_male
ENSNLEG00000015327	RC3H1	100	96.649	ENSSTOG00000016033	RC3H1	100	96.649	Ictidomys_tridecemlineatus
ENSNLEG00000015327	RC3H1	100	95.410	ENSJJAG00000018915	Rc3h1	100	95.234	Jaculus_jaculus
ENSNLEG00000015327	RC3H1	100	75.478	ENSLACG00000016186	RC3H1	100	78.594	Latimeria_chalumnae
ENSNLEG00000015327	RC3H1	97	97.541	ENSLAFG00000004367	RC3H1	100	97.541	Loxodonta_africana
ENSNLEG00000015327	RC3H1	100	99.117	ENSMFAG00000033725	RC3H1	100	99.117	Macaca_fascicularis
ENSNLEG00000015327	RC3H1	100	99.029	ENSMMUG00000000630	RC3H1	100	99.029	Macaca_mulatta
ENSNLEG00000015327	RC3H1	100	99.206	ENSMNEG00000035968	RC3H1	100	99.206	Macaca_nemestrina
ENSNLEG00000015327	RC3H1	100	99.117	ENSMLEG00000037455	RC3H1	100	99.117	Mandrillus_leucophaeus
ENSNLEG00000015327	RC3H1	88	94.456	ENSMAUG00000020864	Rc3h1	93	93.952	Mesocricetus_auratus
ENSNLEG00000015327	RC3H1	100	97.352	ENSMICG00000003000	RC3H1	100	97.352	Microcebus_murinus
ENSNLEG00000015327	RC3H1	93	93.277	ENSMOCG00000016587	Rc3h1	98	92.898	Microtus_ochrogaster
ENSNLEG00000015327	RC3H1	100	92.416	ENSMODG00000004289	RC3H1	100	92.504	Monodelphis_domestica
ENSNLEG00000015327	RC3H1	100	93.910	MGP_CAROLIEiJ_G0014756	Rc3h1	100	93.469	Mus_caroli
ENSNLEG00000015327	RC3H1	100	93.733	ENSMUSG00000040423	Rc3h1	100	93.292	Mus_musculus
ENSNLEG00000015327	RC3H1	100	93.557	MGP_PahariEiJ_G0027992	Rc3h1	100	93.116	Mus_pahari
ENSNLEG00000015327	RC3H1	100	93.557	MGP_SPRETEiJ_G0015563	Rc3h1	100	93.116	Mus_spretus
ENSNLEG00000015327	RC3H1	100	96.561	ENSMPUG00000004747	RC3H1	100	96.561	Mustela_putorius_furo
ENSNLEG00000015327	RC3H1	100	95.587	ENSMLUG00000011127	RC3H1	100	95.587	Myotis_lucifugus
ENSNLEG00000015327	RC3H1	100	95.940	ENSNGAG00000011135	Rc3h1	100	95.499	Nannospalax_galili
ENSNLEG00000015327	RC3H1	99	83.112	ENSOPRG00000013068	RC3H1	99	83.201	Ochotona_princeps
ENSNLEG00000015327	RC3H1	100	94.621	ENSODEG00000014185	RC3H1	100	94.621	Octodon_degus
ENSNLEG00000015327	RC3H1	100	91.616	ENSOANG00000000924	RC3H1	100	91.528	Ornithorhynchus_anatinus
ENSNLEG00000015327	RC3H1	99	96.061	ENSOCUG00000004930	RC3H1	98	96.061	Oryctolagus_cuniculus
ENSNLEG00000015327	RC3H1	100	90.132	ENSOGAG00000004044	RC3H1	100	90.132	Otolemur_garnettii
ENSNLEG00000015327	RC3H1	100	96.491	ENSOARG00000013011	RC3H1	100	96.491	Ovis_aries
ENSNLEG00000015327	RC3H1	100	99.383	ENSPPAG00000039253	RC3H1	100	99.383	Pan_paniscus
ENSNLEG00000015327	RC3H1	100	96.558	ENSPPRG00000009007	RC3H1	100	96.558	Panthera_pardus
ENSNLEG00000015327	RC3H1	100	96.924	ENSPTIG00000015326	RC3H1	100	96.924	Panthera_tigris_altaica
ENSNLEG00000015327	RC3H1	100	99.383	ENSPTRG00000001702	RC3H1	100	99.383	Pan_troglodytes
ENSNLEG00000015327	RC3H1	100	99.117	ENSPANG00000008886	RC3H1	100	99.117	Papio_anubis
ENSNLEG00000015327	RC3H1	100	89.132	ENSPSIG00000016181	RC3H1	100	89.395	Pelodiscus_sinensis
ENSNLEG00000015327	RC3H1	100	93.998	ENSPEMG00000011966	Rc3h1	100	93.645	Peromyscus_maniculatus_bairdii
ENSNLEG00000015327	RC3H1	70	94.177	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSNLEG00000015327	RC3H1	100	95.940	ENSPPYG00000000490	RC3H1	98	98.469	Pongo_abelii
ENSNLEG00000015327	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSNLEG00000015327	RC3H1	83	97.009	ENSPCOG00000021795	RC3H1	96	97.009	Propithecus_coquereli
ENSNLEG00000015327	RC3H1	100	87.996	ENSPVAG00000007593	RC3H1	100	87.996	Pteropus_vampyrus
ENSNLEG00000015327	RC3H1	97	61.715	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSNLEG00000015327	RC3H1	100	99.118	ENSRBIG00000037743	RC3H1	100	99.118	Rhinopithecus_bieti
ENSNLEG00000015327	RC3H1	100	99.029	ENSRROG00000036546	RC3H1	100	99.029	Rhinopithecus_roxellana
ENSNLEG00000015327	RC3H1	93	89.205	ENSSBOG00000010664	RC3H1	100	92.242	Saimiri_boliviensis_boliviensis
ENSNLEG00000015327	RC3H1	100	91.278	ENSSHAG00000007589	RC3H1	100	91.366	Sarcophilus_harrisii
ENSNLEG00000015327	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSNLEG00000015327	RC3H1	100	84.676	ENSSPUG00000018472	RC3H1	100	84.137	Sphenodon_punctatus
ENSNLEG00000015327	RC3H1	100	97.793	ENSSSCG00000015498	RC3H1	100	97.793	Sus_scrofa
ENSNLEG00000015327	RC3H1	100	87.982	ENSTGUG00000004090	RC3H1	100	87.982	Taeniopygia_guttata
ENSNLEG00000015327	RC3H1	89	96.730	ENSTBEG00000005015	RC3H1	89	96.730	Tupaia_belangeri
ENSNLEG00000015327	RC3H1	100	96.476	ENSTTRG00000008572	RC3H1	100	96.476	Tursiops_truncatus
ENSNLEG00000015327	RC3H1	100	96.205	ENSUAMG00000019525	RC3H1	100	96.205	Ursus_americanus
ENSNLEG00000015327	RC3H1	100	96.737	ENSUMAG00000020087	RC3H1	100	96.737	Ursus_maritimus
ENSNLEG00000015327	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSNLEG00000015327	RC3H1	100	96.570	ENSVVUG00000014201	RC3H1	100	96.570	Vulpes_vulpes
ENSNLEG00000015327	RC3H1	100	78.851	ENSXETG00000020030	rc3h1	100	78.397	Xenopus_tropicalis