EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSNLEG00000016127 (Gene tree)
Gene ID: 100606766
Gene Symbol: SF3B3
Alias: KIAA0017|RSE1|SAP130|SF3b130
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Plus strand
Length: 46559 bases
Position: chr2:49162559-49209117
Accession: 100606766
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000019568	CPSF_A	PF03178.15	1.5e-102	1	1
ENSNLEP00000039562	CPSF_A	PF03178.15	9.8e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000020558	SF3B3-201	3633	XM_003280920	ENSNLEP00000019568	1210 (aa)	XP_003280968	G1S230
ENSNLET00000033729	SF3B3-203	957	-	ENSNLEP00000039562	318 (aa)	-	A0A2I3H7V7
ENSNLET00000057764	SF3B3-202	1251	-	ENSNLEP00000043957	416 (aa)	-	A0A2I3HKC8

Gene Model

Click here to download ENSNLEG00000016127's gene model file

Pathways

Pathway ID	Pathway Name	Source
nle03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000016127's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000016127	SF3B3	99	100.000	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSNLEG00000016127	SF3B3	96	91.980	ENSAPOG00000006172	sf3b3	98	91.980	Acanthochromis_polyacanthus
ENSNLEG00000016127	SF3B3	99	99.682	ENSAMEG00000002187	SF3B3	100	98.198	Ailuropoda_melanoleuca
ENSNLEG00000016127	SF3B3	92	89.295	ENSACIG00000016487	sf3b3	100	89.295	Amphilophus_citrinellus
ENSNLEG00000016127	SF3B3	100	91.954	ENSAOCG00000007158	sf3b3	100	91.954	Amphiprion_ocellaris
ENSNLEG00000016127	SF3B3	100	91.954	ENSAPEG00000022786	sf3b3	100	91.954	Amphiprion_percula
ENSNLEG00000016127	SF3B3	100	92.036	ENSATEG00000013708	sf3b3	100	92.036	Anabas_testudineus
ENSNLEG00000016127	SF3B3	81	96.356	ENSAPLG00000004996	SF3B3	100	96.356	Anas_platyrhynchos
ENSNLEG00000016127	SF3B3	100	97.126	ENSACAG00000001817	SF3B3	100	97.126	Anolis_carolinensis
ENSNLEG00000016127	SF3B3	100	100.000	ENSANAG00000028001	SF3B3	100	100.000	Aotus_nancymaae
ENSNLEG00000016127	SF3B3	96	91.638	ENSACLG00000022555	sf3b3	98	91.638	Astatotilapia_calliptera
ENSNLEG00000016127	SF3B3	100	91.708	ENSAMXG00000003410	sf3b3	100	91.708	Astyanax_mexicanus
ENSNLEG00000016127	SF3B3	99	100.000	ENSBTAG00000010627	SF3B3	100	98.522	Bos_taurus
ENSNLEG00000016127	SF3B3	100	59.593	WBGene00019323	teg-4	100	59.593	Caenorhabditis_elegans
ENSNLEG00000016127	SF3B3	99	100.000	ENSCJAG00000014773	SF3B3	99	98.522	Callithrix_jacchus
ENSNLEG00000016127	SF3B3	99	99.682	ENSCAFG00000020151	SF3B3	100	98.440	Canis_familiaris
ENSNLEG00000016127	SF3B3	99	99.682	ENSCAFG00020020912	SF3B3	100	98.440	Canis_lupus_dingo
ENSNLEG00000016127	SF3B3	99	99.682	ENSCHIG00000019822	SF3B3	100	98.440	Capra_hircus
ENSNLEG00000016127	SF3B3	99	100.000	ENSTSYG00000007910	SF3B3	100	98.522	Carlito_syrichta
ENSNLEG00000016127	SF3B3	99	84.713	ENSCAPG00000001484	SF3B3	92	89.016	Cavia_aperea
ENSNLEG00000016127	SF3B3	99	100.000	ENSCPOG00000000586	SF3B3	100	97.209	Cavia_porcellus
ENSNLEG00000016127	SF3B3	99	100.000	ENSCCAG00000017736	SF3B3	100	98.522	Cebus_capucinus
ENSNLEG00000016127	SF3B3	99	100.000	ENSCATG00000036562	SF3B3	100	98.522	Cercocebus_atys
ENSNLEG00000016127	SF3B3	99	100.000	ENSCLAG00000003921	SF3B3	100	98.522	Chinchilla_lanigera
ENSNLEG00000016127	SF3B3	99	99.682	ENSCSAG00000004371	SF3B3	100	98.440	Chlorocebus_sabaeus
ENSNLEG00000016127	SF3B3	99	94.904	ENSCHOG00000001878	SF3B3	90	90.654	Choloepus_hoffmanni
ENSNLEG00000016127	SF3B3	100	97.373	ENSCPBG00000015853	SF3B3	100	97.373	Chrysemys_picta_bellii
ENSNLEG00000016127	SF3B3	100	79.655	ENSCING00000001342	-	100	79.655	Ciona_intestinalis
ENSNLEG00000016127	SF3B3	99	78.343	ENSCSAVG00000011454	-	100	78.343	Ciona_savignyi
ENSNLEG00000016127	SF3B3	100	95.238	ENSCANG00000042920	SF3B3	100	95.238	Colobus_angolensis_palliatus
ENSNLEG00000016127	SF3B3	99	99.682	ENSCGRG00001015908	Sf3b3	100	98.440	Cricetulus_griseus_chok1gshd
ENSNLEG00000016127	SF3B3	99	99.682	ENSCGRG00000010180	Sf3b3	100	98.440	Cricetulus_griseus_crigri
ENSNLEG00000016127	SF3B3	82	90.728	ENSCSEG00000014192	sf3b3	99	90.728	Cynoglossus_semilaevis
ENSNLEG00000016127	SF3B3	100	91.133	ENSCVAG00000010459	sf3b3	100	91.133	Cyprinodon_variegatus
ENSNLEG00000016127	SF3B3	100	92.036	ENSDARG00000103553	sf3b3	100	92.036	Danio_rerio
ENSNLEG00000016127	SF3B3	99	100.000	ENSDNOG00000043626	SF3B3	100	98.843	Dasypus_novemcinctus
ENSNLEG00000016127	SF3B3	99	100.000	ENSDORG00000014176	Sf3b3	100	98.522	Dipodomys_ordii
ENSNLEG00000016127	SF3B3	100	74.186	FBgn0035162	Sf3b3	100	74.186	Drosophila_melanogaster
ENSNLEG00000016127	SF3B3	84	100.000	ENSETEG00000002729	SF3B3	84	100.000	Echinops_telfairi
ENSNLEG00000016127	SF3B3	100	86.535	ENSEBUG00000006117	sf3b3	100	86.535	Eptatretus_burgeri
ENSNLEG00000016127	SF3B3	99	99.682	ENSEASG00005013376	SF3B3	100	98.440	Equus_asinus_asinus
ENSNLEG00000016127	SF3B3	99	99.682	ENSECAG00000014053	SF3B3	100	98.440	Equus_caballus
ENSNLEG00000016127	SF3B3	99	99.363	ENSEEUG00000015611	SF3B3	93	99.643	Erinaceus_europaeus
ENSNLEG00000016127	SF3B3	100	89.926	ENSELUG00000015417	sf3b3	100	89.926	Esox_lucius
ENSNLEG00000016127	SF3B3	99	99.682	ENSFCAG00000009487	SF3B3	100	98.440	Felis_catus
ENSNLEG00000016127	SF3B3	100	97.455	ENSFALG00000007372	SF3B3	100	97.455	Ficedula_albicollis
ENSNLEG00000016127	SF3B3	99	99.682	ENSFDAG00000002608	SF3B3	100	98.440	Fukomys_damarensis
ENSNLEG00000016127	SF3B3	100	91.544	ENSFHEG00000017824	sf3b3	100	91.544	Fundulus_heteroclitus
ENSNLEG00000016127	SF3B3	100	87.941	ENSGMOG00000008139	sf3b3	100	87.941	Gadus_morhua
ENSNLEG00000016127	SF3B3	99	98.726	ENSGALG00000002531	SF3B3	100	97.701	Gallus_gallus
ENSNLEG00000016127	SF3B3	100	91.133	ENSGAFG00000015206	sf3b3	100	91.133	Gambusia_affinis
ENSNLEG00000016127	SF3B3	100	91.550	ENSGACG00000002646	sf3b3	100	91.550	Gasterosteus_aculeatus
ENSNLEG00000016127	SF3B3	99	97.452	ENSGAGG00000006746	SF3B3	97	97.355	Gopherus_agassizii
ENSNLEG00000016127	SF3B3	100	99.686	ENSGGOG00000003246	SF3B3	100	99.686	Gorilla_gorilla
ENSNLEG00000016127	SF3B3	92	84.389	ENSHBUG00000005960	sf3b3	100	85.549	Haplochromis_burtoni
ENSNLEG00000016127	SF3B3	99	100.000	ENSHGLG00000010135	SF3B3	100	98.522	Heterocephalus_glaber_female
ENSNLEG00000016127	SF3B3	99	100.000	ENSHGLG00100011148	SF3B3	100	96.353	Heterocephalus_glaber_male
ENSNLEG00000016127	SF3B3	100	91.215	ENSHCOG00000011981	sf3b3	100	91.215	Hippocampus_comes
ENSNLEG00000016127	SF3B3	100	91.626	ENSIPUG00000020435	sf3b3	100	91.626	Ictalurus_punctatus
ENSNLEG00000016127	SF3B3	99	100.000	ENSSTOG00000007065	SF3B3	100	98.522	Ictidomys_tridecemlineatus
ENSNLEG00000016127	SF3B3	99	100.000	ENSJJAG00000003948	Sf3b3	100	98.522	Jaculus_jaculus
ENSNLEG00000016127	SF3B3	100	89.327	ENSKMAG00000004066	sf3b3	99	91.468	Kryptolebias_marmoratus
ENSNLEG00000016127	SF3B3	100	91.461	ENSLBEG00000018302	sf3b3	100	91.461	Labrus_bergylta
ENSNLEG00000016127	SF3B3	99	91.401	ENSLACG00000012501	SF3B3	99	90.788	Latimeria_chalumnae
ENSNLEG00000016127	SF3B3	100	92.617	ENSLOCG00000007566	sf3b3	100	92.617	Lepisosteus_oculatus
ENSNLEG00000016127	SF3B3	99	99.682	ENSLAFG00000012219	SF3B3	100	99.653	Loxodonta_africana
ENSNLEG00000016127	SF3B3	99	100.000	ENSMFAG00000045487	SF3B3	100	98.522	Macaca_fascicularis
ENSNLEG00000016127	SF3B3	99	100.000	ENSMMUG00000017812	SF3B3	100	98.522	Macaca_mulatta
ENSNLEG00000016127	SF3B3	99	100.000	ENSMNEG00000033385	SF3B3	100	98.522	Macaca_nemestrina
ENSNLEG00000016127	SF3B3	99	100.000	ENSMLEG00000043891	SF3B3	98	99.367	Mandrillus_leucophaeus
ENSNLEG00000016127	SF3B3	100	92.036	ENSMAMG00000016837	sf3b3	100	92.036	Mastacembelus_armatus
ENSNLEG00000016127	SF3B3	100	91.626	ENSMZEG00005010836	sf3b3	100	91.626	Maylandia_zebra
ENSNLEG00000016127	SF3B3	89	89.084	ENSMZEG00005026015	sf3b3	99	89.084	Maylandia_zebra
ENSNLEG00000016127	SF3B3	99	98.726	ENSMGAG00000001597	SF3B3	100	97.701	Meleagris_gallopavo
ENSNLEG00000016127	SF3B3	81	83.069	ENSMAUG00000013618	Sf3b3	95	83.069	Mesocricetus_auratus
ENSNLEG00000016127	SF3B3	99	99.682	ENSMICG00000001363	SF3B3	100	97.377	Microcebus_murinus
ENSNLEG00000016127	SF3B3	99	99.682	ENSMOCG00000006108	Sf3b3	100	98.440	Microtus_ochrogaster
ENSNLEG00000016127	SF3B3	89	89.454	ENSMMOG00000002598	sf3b3	97	89.454	Mola_mola
ENSNLEG00000016127	SF3B3	99	99.045	ENSMODG00000014363	SF3B3	100	94.988	Monodelphis_domestica
ENSNLEG00000016127	SF3B3	100	91.790	ENSMALG00000008014	sf3b3	100	91.790	Monopterus_albus
ENSNLEG00000016127	SF3B3	99	99.363	MGP_CAROLIEiJ_G0031563	Sf3b3	100	98.358	Mus_caroli
ENSNLEG00000016127	SF3B3	99	99.682	ENSMUSG00000033732	Sf3b3	100	98.440	Mus_musculus
ENSNLEG00000016127	SF3B3	99	99.363	MGP_SPRETEiJ_G0032681	Sf3b3	100	98.358	Mus_spretus
ENSNLEG00000016127	SF3B3	99	99.682	ENSMPUG00000010277	SF3B3	100	98.440	Mustela_putorius_furo
ENSNLEG00000016127	SF3B3	99	99.682	ENSMLUG00000014607	SF3B3	100	98.358	Myotis_lucifugus
ENSNLEG00000016127	SF3B3	99	100.000	ENSNGAG00000021903	Sf3b3	100	98.522	Nannospalax_galili
ENSNLEG00000016127	SF3B3	84	92.683	ENSNBRG00000007197	sf3b3	100	92.683	Neolamprologus_brichardi
ENSNLEG00000016127	SF3B3	94	98.993	ENSMEUG00000004479	SF3B3	94	98.945	Notamacropus_eugenii
ENSNLEG00000016127	SF3B3	99	99.682	ENSOPRG00000009847	SF3B3	100	95.226	Ochotona_princeps
ENSNLEG00000016127	SF3B3	99	99.682	ENSODEG00000014154	SF3B3	100	98.440	Octodon_degus
ENSNLEG00000016127	SF3B3	100	91.872	ENSONIG00000011198	sf3b3	100	91.872	Oreochromis_niloticus
ENSNLEG00000016127	SF3B3	100	98.194	ENSOANG00000001161	-	100	98.194	Ornithorhynchus_anatinus
ENSNLEG00000016127	SF3B3	99	100.000	ENSOCUG00000004139	SF3B3	100	96.141	Oryctolagus_cuniculus
ENSNLEG00000016127	SF3B3	100	91.708	ENSORLG00000013472	sf3b3	100	91.708	Oryzias_latipes
ENSNLEG00000016127	SF3B3	100	91.708	ENSORLG00020017473	sf3b3	100	91.708	Oryzias_latipes_hni
ENSNLEG00000016127	SF3B3	100	91.708	ENSORLG00015007710	sf3b3	100	91.708	Oryzias_latipes_hsok
ENSNLEG00000016127	SF3B3	100	91.379	ENSOMEG00000014483	sf3b3	100	91.379	Oryzias_melastigma
ENSNLEG00000016127	SF3B3	99	99.363	ENSOGAG00000016051	SF3B3	100	98.116	Otolemur_garnettii
ENSNLEG00000016127	SF3B3	100	98.198	ENSOARG00000004816	SF3B3	100	98.198	Ovis_aries
ENSNLEG00000016127	SF3B3	100	99.686	ENSPPAG00000026807	SF3B3	100	99.686	Pan_paniscus
ENSNLEG00000016127	SF3B3	99	99.682	ENSPPRG00000001686	SF3B3	100	98.440	Panthera_pardus
ENSNLEG00000016127	SF3B3	99	89.172	ENSPTIG00000020382	SF3B3	100	95.496	Panthera_tigris_altaica
ENSNLEG00000016127	SF3B3	100	99.686	ENSPTRG00000008308	SF3B3	100	99.686	Pan_troglodytes
ENSNLEG00000016127	SF3B3	99	100.000	ENSPANG00000024075	SF3B3	100	98.522	Papio_anubis
ENSNLEG00000016127	SF3B3	100	91.297	ENSPKIG00000002712	sf3b3	100	91.297	Paramormyrops_kingsleyae
ENSNLEG00000016127	SF3B3	99	97.771	ENSPSIG00000002232	SF3B3	100	97.610	Pelodiscus_sinensis
ENSNLEG00000016127	SF3B3	99	85.669	ENSPMGG00000016960	sf3b3	100	88.668	Periophthalmus_magnuspinnatus
ENSNLEG00000016127	SF3B3	99	99.682	ENSPEMG00000008603	Sf3b3	100	98.440	Peromyscus_maniculatus_bairdii
ENSNLEG00000016127	SF3B3	100	90.558	ENSPMAG00000001793	sf3b3	100	90.558	Petromyzon_marinus
ENSNLEG00000016127	SF3B3	100	98.194	ENSPCIG00000014927	SF3B3	100	98.194	Phascolarctos_cinereus
ENSNLEG00000016127	SF3B3	100	91.215	ENSPFOG00000015516	sf3b3	100	91.215	Poecilia_formosa
ENSNLEG00000016127	SF3B3	100	91.215	ENSPLAG00000014330	sf3b3	100	91.215	Poecilia_latipinna
ENSNLEG00000016127	SF3B3	100	91.297	ENSPMEG00000019856	sf3b3	100	91.297	Poecilia_mexicana
ENSNLEG00000016127	SF3B3	81	91.777	ENSPREG00000019669	sf3b3	97	91.777	Poecilia_reticulata
ENSNLEG00000016127	SF3B3	99	99.682	ENSPPYG00000007539	SF3B3	100	94.545	Pongo_abelii
ENSNLEG00000016127	SF3B3	99	89.172	ENSPCAG00000002623	SF3B3	100	76.765	Procavia_capensis
ENSNLEG00000016127	SF3B3	99	99.682	ENSPCOG00000026582	SF3B3	100	100.000	Propithecus_coquereli
ENSNLEG00000016127	SF3B3	99	99.363	ENSPVAG00000000684	SF3B3	100	98.358	Pteropus_vampyrus
ENSNLEG00000016127	SF3B3	100	91.708	ENSPNYG00000003528	sf3b3	100	91.708	Pundamilia_nyererei
ENSNLEG00000016127	SF3B3	100	92.036	ENSPNAG00000015419	sf3b3	100	92.036	Pygocentrus_nattereri
ENSNLEG00000016127	SF3B3	99	99.682	ENSRNOG00000017724	Sf3b3	100	98.440	Rattus_norvegicus
ENSNLEG00000016127	SF3B3	99	100.000	ENSRBIG00000021904	SF3B3	100	98.522	Rhinopithecus_bieti
ENSNLEG00000016127	SF3B3	99	100.000	ENSRROG00000045703	SF3B3	100	98.522	Rhinopithecus_roxellana
ENSNLEG00000016127	SF3B3	100	100.000	ENSSBOG00000029156	SF3B3	100	100.000	Saimiri_boliviensis_boliviensis
ENSNLEG00000016127	SF3B3	100	98.194	ENSSHAG00000000372	SF3B3	100	98.194	Sarcophilus_harrisii
ENSNLEG00000016127	SF3B3	100	92.282	ENSSFOG00015012877	sf3b3	100	92.282	Scleropages_formosus
ENSNLEG00000016127	SF3B3	100	91.379	ENSSMAG00000014386	sf3b3	100	91.379	Scophthalmus_maximus
ENSNLEG00000016127	SF3B3	100	92.118	ENSSDUG00000021201	sf3b3	100	92.118	Seriola_dumerili
ENSNLEG00000016127	SF3B3	100	92.036	ENSSLDG00000017532	sf3b3	100	92.036	Seriola_lalandi_dorsalis
ENSNLEG00000016127	SF3B3	93	100.000	ENSSARG00000006917	SF3B3	93	100.000	Sorex_araneus
ENSNLEG00000016127	SF3B3	100	97.455	ENSSPUG00000006253	SF3B3	100	97.455	Sphenodon_punctatus
ENSNLEG00000016127	SF3B3	99	86.624	ENSSPAG00000003125	sf3b3	100	84.691	Stegastes_partitus
ENSNLEG00000016127	SF3B3	99	99.682	ENSSSCG00000025323	SF3B3	100	98.440	Sus_scrofa
ENSNLEG00000016127	SF3B3	100	97.621	ENSTGUG00000006082	SF3B3	100	97.621	Taeniopygia_guttata
ENSNLEG00000016127	SF3B3	72	64.255	ENSTRUG00000015623	sf3b3	88	83.642	Takifugu_rubripes
ENSNLEG00000016127	SF3B3	63	94.828	ENSTRUG00000016719	-	97	84.615	Takifugu_rubripes
ENSNLEG00000016127	SF3B3	89	91.460	ENSTNIG00000004857	sf3b3	100	91.460	Tetraodon_nigroviridis
ENSNLEG00000016127	SF3B3	99	95.860	ENSTBEG00000002946	SF3B3	94	97.727	Tupaia_belangeri
ENSNLEG00000016127	SF3B3	99	99.682	ENSTTRG00000005855	SF3B3	100	97.619	Tursiops_truncatus
ENSNLEG00000016127	SF3B3	99	99.682	ENSUAMG00000006780	SF3B3	100	98.440	Ursus_americanus
ENSNLEG00000016127	SF3B3	99	99.682	ENSUMAG00000017757	SF3B3	100	98.440	Ursus_maritimus
ENSNLEG00000016127	SF3B3	95	97.727	ENSVPAG00000003202	SF3B3	94	97.727	Vicugna_pacos
ENSNLEG00000016127	SF3B3	99	99.363	ENSVVUG00000017922	SF3B3	100	98.358	Vulpes_vulpes
ENSNLEG00000016127	SF3B3	100	95.238	ENSXETG00000032869	SF3B3	100	95.238	Xenopus_tropicalis
ENSNLEG00000016127	SF3B3	77	92.259	ENSXCOG00000013628	sf3b3	97	92.259	Xiphophorus_couchianus
ENSNLEG00000016127	SF3B3	100	91.215	ENSXMAG00000006334	sf3b3	100	91.215	Xiphophorus_maculatus