EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNLEG00000016345 (Gene tree)
Gene ID: 100579870
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Nomascus_leucogenys
Status: putative
Strand: Minus strand
Length: 41823 bases
Position: chr3:18946965-18988787
Accession: 100579870
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNLEP00000019832	TruB_N	PF01509.18	4.3e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNLET00000020829	TRUB1-201	3727	XM_003254984	ENSNLEP00000019832	349 (aa)	XP_003255032	G1S2U4

Gene Model

Click here to download ENSNLEG00000016345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNLEG00000016345's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNLEG00000016345	TRUB1	58	34.615	ENSNLEG00000017556	TRUB2	62	34.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNLEG00000016345	TRUB1	100	98.281	ENSG00000165832	TRUB1	100	98.281	Homo_sapiens
ENSNLEG00000016345	TRUB1	70	68.571	ENSAPOG00000020565	trub1	89	68.293	Acanthochromis_polyacanthus
ENSNLEG00000016345	TRUB1	96	92.604	ENSAMEG00000014931	TRUB1	96	92.604	Ailuropoda_melanoleuca
ENSNLEG00000016345	TRUB1	70	62.602	ENSACIG00000003060	trub1	82	62.602	Amphilophus_citrinellus
ENSNLEG00000016345	TRUB1	70	68.571	ENSAOCG00000017188	trub1	89	68.293	Amphiprion_ocellaris
ENSNLEG00000016345	TRUB1	70	67.886	ENSAPEG00000015209	trub1	89	67.886	Amphiprion_percula
ENSNLEG00000016345	TRUB1	69	68.880	ENSATEG00000023291	trub1	86	68.880	Anabas_testudineus
ENSNLEG00000016345	TRUB1	79	76.000	ENSAPLG00000006808	TRUB1	99	76.000	Anas_platyrhynchos
ENSNLEG00000016345	TRUB1	77	71.269	ENSACAG00000009282	TRUB1	97	71.269	Anolis_carolinensis
ENSNLEG00000016345	TRUB1	100	96.581	ENSANAG00000022870	TRUB1	100	96.581	Aotus_nancymaae
ENSNLEG00000016345	TRUB1	72	67.063	ENSACLG00000000823	trub1	91	67.063	Astatotilapia_calliptera
ENSNLEG00000016345	TRUB1	77	65.926	ENSAMXG00000015845	trub1	90	65.926	Astyanax_mexicanus
ENSNLEG00000016345	TRUB1	98	92.105	ENSBTAG00000012955	TRUB1	95	92.560	Bos_taurus
ENSNLEG00000016345	TRUB1	100	96.866	ENSCJAG00000047815	TRUB1	100	96.866	Callithrix_jacchus
ENSNLEG00000016345	TRUB1	99	93.123	ENSCAFG00000011688	TRUB1	96	93.452	Canis_familiaris
ENSNLEG00000016345	TRUB1	99	93.410	ENSCAFG00020013237	TRUB1	96	93.750	Canis_lupus_dingo
ENSNLEG00000016345	TRUB1	98	92.398	ENSCHIG00000020884	TRUB1	96	92.857	Capra_hircus
ENSNLEG00000016345	TRUB1	100	90.598	ENSTSYG00000000446	TRUB1	96	92.308	Carlito_syrichta
ENSNLEG00000016345	TRUB1	72	84.252	ENSCAPG00000017088	TRUB1	100	84.252	Cavia_aperea
ENSNLEG00000016345	TRUB1	71	79.032	ENSCPOG00000030129	-	82	79.574	Cavia_porcellus
ENSNLEG00000016345	TRUB1	70	84.898	ENSCPOG00000040236	-	95	86.207	Cavia_porcellus
ENSNLEG00000016345	TRUB1	100	96.011	ENSCCAG00000028842	TRUB1	100	96.011	Cebus_capucinus
ENSNLEG00000016345	TRUB1	100	98.000	ENSCATG00000033431	TRUB1	100	98.000	Cercocebus_atys
ENSNLEG00000016345	TRUB1	70	88.163	ENSCLAG00000008664	TRUB1	95	89.655	Chinchilla_lanigera
ENSNLEG00000016345	TRUB1	100	98.286	ENSCSAG00000004891	TRUB1	100	98.286	Chlorocebus_sabaeus
ENSNLEG00000016345	TRUB1	99	77.971	ENSCHOG00000011931	TRUB1	95	78.614	Choloepus_hoffmanni
ENSNLEG00000016345	TRUB1	78	79.487	ENSCPBG00000003051	TRUB1	94	79.487	Chrysemys_picta_bellii
ENSNLEG00000016345	TRUB1	100	98.286	ENSCANG00000029445	TRUB1	100	98.286	Colobus_angolensis_palliatus
ENSNLEG00000016345	TRUB1	72	86.614	ENSCGRG00001016772	-	90	78.451	Cricetulus_griseus_chok1gshd
ENSNLEG00000016345	TRUB1	80	78.929	ENSCGRG00001010322	-	79	78.912	Cricetulus_griseus_chok1gshd
ENSNLEG00000016345	TRUB1	80	87.857	ENSCGRG00000010806	Trub1	91	87.205	Cricetulus_griseus_crigri
ENSNLEG00000016345	TRUB1	73	62.891	ENSCSEG00000011261	trub1	97	56.579	Cynoglossus_semilaevis
ENSNLEG00000016345	TRUB1	74	65.891	ENSCVAG00000008791	trub1	82	64.552	Cyprinodon_variegatus
ENSNLEG00000016345	TRUB1	75	66.920	ENSDARG00000053805	trub1	90	66.920	Danio_rerio
ENSNLEG00000016345	TRUB1	97	86.471	ENSDNOG00000001069	TRUB1	95	86.866	Dasypus_novemcinctus
ENSNLEG00000016345	TRUB1	99	89.112	ENSDORG00000010431	Trub1	96	88.690	Dipodomys_ordii
ENSNLEG00000016345	TRUB1	81	76.961	ENSETEG00000009183	TRUB1	77	76.316	Echinops_telfairi
ENSNLEG00000016345	TRUB1	96	93.155	ENSEASG00005014739	TRUB1	96	93.155	Equus_asinus_asinus
ENSNLEG00000016345	TRUB1	96	93.155	ENSECAG00000007177	TRUB1	96	93.155	Equus_caballus
ENSNLEG00000016345	TRUB1	99	75.978	ENSEEUG00000013993	TRUB1	83	82.274	Erinaceus_europaeus
ENSNLEG00000016345	TRUB1	70	69.796	ENSELUG00000000502	trub1	86	69.796	Esox_lucius
ENSNLEG00000016345	TRUB1	86	96.000	ENSFCAG00000031927	TRUB1	96	92.836	Felis_catus
ENSNLEG00000016345	TRUB1	66	78.788	ENSFALG00000002232	TRUB1	92	76.667	Ficedula_albicollis
ENSNLEG00000016345	TRUB1	70	86.420	ENSFDAG00000008140	TRUB1	95	88.793	Fukomys_damarensis
ENSNLEG00000016345	TRUB1	70	66.531	ENSFHEG00000004016	trub1	84	66.531	Fundulus_heteroclitus
ENSNLEG00000016345	TRUB1	78	75.368	ENSGALG00000009091	TRUB1	97	74.528	Gallus_gallus
ENSNLEG00000016345	TRUB1	70	64.344	ENSGAFG00000009193	trub1	86	64.344	Gambusia_affinis
ENSNLEG00000016345	TRUB1	56	68.205	ENSGACG00000015387	trub1	96	68.205	Gasterosteus_aculeatus
ENSNLEG00000016345	TRUB1	83	77.663	ENSGAGG00000009758	TRUB1	81	78.169	Gopherus_agassizii
ENSNLEG00000016345	TRUB1	100	98.567	ENSGGOG00000004583	TRUB1	100	98.567	Gorilla_gorilla
ENSNLEG00000016345	TRUB1	72	67.063	ENSHBUG00000016787	trub1	91	67.063	Haplochromis_burtoni
ENSNLEG00000016345	TRUB1	99	86.246	ENSHGLG00000015314	TRUB1	96	87.500	Heterocephalus_glaber_female
ENSNLEG00000016345	TRUB1	70	84.898	ENSHGLG00100009183	TRUB1	95	86.638	Heterocephalus_glaber_male
ENSNLEG00000016345	TRUB1	70	68.571	ENSHCOG00000017877	trub1	89	68.571	Hippocampus_comes
ENSNLEG00000016345	TRUB1	80	64.875	ENSIPUG00000017559	trub1	98	64.875	Ictalurus_punctatus
ENSNLEG00000016345	TRUB1	90	92.675	ENSSTOG00000003641	TRUB1	89	94.314	Ictidomys_tridecemlineatus
ENSNLEG00000016345	TRUB1	99	84.241	ENSJJAG00000011800	Trub1	88	91.304	Jaculus_jaculus
ENSNLEG00000016345	TRUB1	75	64.419	ENSKMAG00000006232	trub1	94	64.419	Kryptolebias_marmoratus
ENSNLEG00000016345	TRUB1	76	64.906	ENSLBEG00000026722	trub1	92	64.906	Labrus_bergylta
ENSNLEG00000016345	TRUB1	79	73.551	ENSLACG00000014885	TRUB1	92	73.551	Latimeria_chalumnae
ENSNLEG00000016345	TRUB1	78	70.696	ENSLOCG00000012979	trub1	93	70.696	Lepisosteus_oculatus
ENSNLEG00000016345	TRUB1	100	79.609	ENSLAFG00000015452	TRUB1	96	80.523	Loxodonta_africana
ENSNLEG00000016345	TRUB1	100	98.000	ENSMFAG00000031767	TRUB1	100	98.000	Macaca_fascicularis
ENSNLEG00000016345	TRUB1	100	98.286	ENSMMUG00000001902	TRUB1	100	98.286	Macaca_mulatta
ENSNLEG00000016345	TRUB1	100	93.714	ENSMNEG00000044646	TRUB1	100	93.714	Macaca_nemestrina
ENSNLEG00000016345	TRUB1	100	98.000	ENSMLEG00000042655	TRUB1	100	98.000	Mandrillus_leucophaeus
ENSNLEG00000016345	TRUB1	72	67.063	ENSMZEG00005024095	trub1	91	67.063	Maylandia_zebra
ENSNLEG00000016345	TRUB1	75	76.336	ENSMGAG00000011135	TRUB1	90	76.336	Meleagris_gallopavo
ENSNLEG00000016345	TRUB1	85	84.564	ENSMAUG00000011101	Trub1	88	84.615	Mesocricetus_auratus
ENSNLEG00000016345	TRUB1	99	94.556	ENSMICG00000016324	TRUB1	96	95.238	Microcebus_murinus
ENSNLEG00000016345	TRUB1	91	82.154	ENSMOCG00000017759	Trub1	90	86.577	Microtus_ochrogaster
ENSNLEG00000016345	TRUB1	82	82.867	ENSMODG00000009676	TRUB1	81	81.081	Monodelphis_domestica
ENSNLEG00000016345	TRUB1	99	80.516	MGP_CAROLIEiJ_G0023100	Trub1	88	86.242	Mus_caroli
ENSNLEG00000016345	TRUB1	99	79.370	ENSMUSG00000025086	Trub1	88	85.235	Mus_musculus
ENSNLEG00000016345	TRUB1	99	80.516	MGP_PahariEiJ_G0014588	Trub1	88	86.242	Mus_pahari
ENSNLEG00000016345	TRUB1	99	79.656	MGP_SPRETEiJ_G0024021	Trub1	88	85.570	Mus_spretus
ENSNLEG00000016345	TRUB1	86	97.342	ENSMPUG00000003556	TRUB1	96	94.643	Mustela_putorius_furo
ENSNLEG00000016345	TRUB1	96	88.060	ENSMLUG00000017686	TRUB1	96	86.944	Myotis_lucifugus
ENSNLEG00000016345	TRUB1	99	85.673	ENSNGAG00000018682	Trub1	97	87.202	Nannospalax_galili
ENSNLEG00000016345	TRUB1	70	68.293	ENSNBRG00000023393	trub1	88	68.293	Neolamprologus_brichardi
ENSNLEG00000016345	TRUB1	58	90.547	ENSMEUG00000006603	TRUB1	78	87.678	Notamacropus_eugenii
ENSNLEG00000016345	TRUB1	86	85.714	ENSOPRG00000009371	TRUB1	87	85.619	Ochotona_princeps
ENSNLEG00000016345	TRUB1	99	84.241	ENSODEG00000010854	TRUB1	96	85.119	Octodon_degus
ENSNLEG00000016345	TRUB1	70	67.480	ENSONIG00000007249	trub1	89	67.480	Oreochromis_niloticus
ENSNLEG00000016345	TRUB1	78	80.292	ENSOANG00000001556	TRUB1	93	78.092	Ornithorhynchus_anatinus
ENSNLEG00000016345	TRUB1	86	89.037	ENSOCUG00000009456	TRUB1	96	86.186	Oryctolagus_cuniculus
ENSNLEG00000016345	TRUB1	76	65.152	ENSORLG00000029719	trub1	92	65.152	Oryzias_latipes
ENSNLEG00000016345	TRUB1	76	64.773	ENSORLG00020016767	trub1	91	64.773	Oryzias_latipes_hni
ENSNLEG00000016345	TRUB1	76	64.773	ENSORLG00015014728	trub1	92	64.773	Oryzias_latipes_hsok
ENSNLEG00000016345	TRUB1	74	66.023	ENSOMEG00000014556	trub1	89	65.748	Oryzias_melastigma
ENSNLEG00000016345	TRUB1	99	93.410	ENSOGAG00000015895	TRUB1	96	94.940	Otolemur_garnettii
ENSNLEG00000016345	TRUB1	84	93.709	ENSOARG00000015591	TRUB1	96	88.921	Ovis_aries
ENSNLEG00000016345	TRUB1	100	98.854	ENSPPAG00000043645	TRUB1	100	98.854	Pan_paniscus
ENSNLEG00000016345	TRUB1	96	92.239	ENSPPRG00000007096	TRUB1	96	92.239	Panthera_pardus
ENSNLEG00000016345	TRUB1	96	92.537	ENSPTIG00000006378	TRUB1	96	92.537	Panthera_tigris_altaica
ENSNLEG00000016345	TRUB1	100	98.854	ENSPTRG00000002964	TRUB1	100	98.854	Pan_troglodytes
ENSNLEG00000016345	TRUB1	100	98.000	ENSPANG00000020712	TRUB1	100	98.000	Papio_anubis
ENSNLEG00000016345	TRUB1	78	77.574	ENSPSIG00000012877	TRUB1	93	77.574	Pelodiscus_sinensis
ENSNLEG00000016345	TRUB1	70	66.531	ENSPMGG00000000075	trub1	88	66.531	Periophthalmus_magnuspinnatus
ENSNLEG00000016345	TRUB1	86	85.333	ENSPEMG00000011156	Trub1	88	85.570	Peromyscus_maniculatus_bairdii
ENSNLEG00000016345	TRUB1	82	81.818	ENSPCIG00000009729	TRUB1	79	81.164	Phascolarctos_cinereus
ENSNLEG00000016345	TRUB1	70	66.122	ENSPFOG00000009950	trub1	90	66.122	Poecilia_formosa
ENSNLEG00000016345	TRUB1	70	66.122	ENSPLAG00000013855	trub1	86	66.122	Poecilia_latipinna
ENSNLEG00000016345	TRUB1	70	66.122	ENSPMEG00000009064	trub1	88	66.122	Poecilia_mexicana
ENSNLEG00000016345	TRUB1	70	66.939	ENSPREG00000003343	trub1	88	66.939	Poecilia_reticulata
ENSNLEG00000016345	TRUB1	100	98.567	ENSPPYG00000002676	TRUB1	100	98.567	Pongo_abelii
ENSNLEG00000016345	TRUB1	100	75.852	ENSPCAG00000008427	TRUB1	96	76.331	Procavia_capensis
ENSNLEG00000016345	TRUB1	99	90.258	ENSPCOG00000024360	TRUB1	96	90.746	Propithecus_coquereli
ENSNLEG00000016345	TRUB1	76	92.045	ENSPVAG00000007575	TRUB1	95	92.829	Pteropus_vampyrus
ENSNLEG00000016345	TRUB1	72	67.063	ENSPNYG00000018614	trub1	91	67.063	Pundamilia_nyererei
ENSNLEG00000016345	TRUB1	74	59.615	ENSPNAG00000006881	trub1	88	58.456	Pygocentrus_nattereri
ENSNLEG00000016345	TRUB1	99	81.375	ENSRNOG00000017321	Trub1	88	86.288	Rattus_norvegicus
ENSNLEG00000016345	TRUB1	100	88.286	ENSRBIG00000033423	TRUB1	96	88.427	Rhinopithecus_bieti
ENSNLEG00000016345	TRUB1	100	98.000	ENSRROG00000033902	TRUB1	100	98.000	Rhinopithecus_roxellana
ENSNLEG00000016345	TRUB1	96	97.033	ENSSBOG00000024237	TRUB1	96	97.033	Saimiri_boliviensis_boliviensis
ENSNLEG00000016345	TRUB1	91	68.847	ENSSHAG00000009346	TRUB1	95	70.261	Sarcophilus_harrisii
ENSNLEG00000016345	TRUB1	70	70.370	ENSSFOG00015022124	trub1	83	70.370	Scleropages_formosus
ENSNLEG00000016345	TRUB1	70	68.699	ENSSMAG00000001020	trub1	88	68.699	Scophthalmus_maximus
ENSNLEG00000016345	TRUB1	69	69.167	ENSSDUG00000016414	trub1	88	69.106	Seriola_dumerili
ENSNLEG00000016345	TRUB1	69	69.583	ENSSLDG00000015486	trub1	88	69.512	Seriola_lalandi_dorsalis
ENSNLEG00000016345	TRUB1	85	75.084	ENSSPUG00000001642	TRUB1	96	77.500	Sphenodon_punctatus
ENSNLEG00000016345	TRUB1	76	66.288	ENSSPAG00000001217	trub1	94	66.288	Stegastes_partitus
ENSNLEG00000016345	TRUB1	99	87.393	ENSSSCG00000010653	TRUB1	96	88.095	Sus_scrofa
ENSNLEG00000016345	TRUB1	77	76.296	ENSTGUG00000010971	TRUB1	97	76.103	Taeniopygia_guttata
ENSNLEG00000016345	TRUB1	72	77.075	ENSTBEG00000002880	TRUB1	99	77.075	Tupaia_belangeri
ENSNLEG00000016345	TRUB1	72	90.438	ENSTTRG00000005767	TRUB1	95	90.438	Tursiops_truncatus
ENSNLEG00000016345	TRUB1	96	94.048	ENSUAMG00000024876	TRUB1	96	94.048	Ursus_americanus
ENSNLEG00000016345	TRUB1	84	96.949	ENSUMAG00000002411	TRUB1	96	90.179	Ursus_maritimus
ENSNLEG00000016345	TRUB1	99	92.264	ENSVPAG00000005507	TRUB1	96	92.560	Vicugna_pacos
ENSNLEG00000016345	TRUB1	99	91.977	ENSVVUG00000010085	TRUB1	80	91.667	Vulpes_vulpes
ENSNLEG00000016345	TRUB1	77	66.418	ENSXETG00000023828	trub1	97	66.418	Xenopus_tropicalis
ENSNLEG00000016345	TRUB1	70	65.021	ENSXCOG00000017847	trub1	86	65.021	Xiphophorus_couchianus
ENSNLEG00000016345	TRUB1	70	65.306	ENSXMAG00000014701	trub1	88	65.306	Xiphophorus_maculatus